Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 MIR5000-201ENST00000577717 103 ntBASIC1.45□□□□□ -2.18
NR2E3Q9Y5X4 MIR6516-201ENST00000630554 81 ntBASIC1.45□□□□□ -2.18
NR2E3Q9Y5X4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 Y_RNA.68-201ENST00000362881 102 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-153P-201ENST00000364422 104 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-396P-201ENST00000365369 105 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 SNORA22-201ENST00000383907 134 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-910P-201ENST00000390844 107 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 AL353813.1-201ENST00000440700 253 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 PDCD5P2-201ENST00000507570 312 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 MIR2115-201ENST00000516657 100 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 RNU7-35P-201ENST00000517174 62 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 MIR1255B1-201ENST00000636325 63 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 MIR6767-201ENST00000637302 66 ntBASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-654P-201ENST00000364373 107 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-106P-201ENST00000384405 107 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 SNORA80D-201ENST00000384488 135 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 SNORD38B-201ENST00000384690 67 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 MIR563-201ENST00000385080 79 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 RPS29P23-201ENST00000458635 123 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 AC004223.1-201ENST00000479840 271 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 SNORA70.22-201ENST00000517160 124 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 uc_338.6-201ENST00000613544 171 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 SEPT14P17-201ENST00000617978 177 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 SNORD38B-202ENST00000625943 69 ntBASIC1.43□□□□□ -2.18
NR2E3Q9Y5X4 RNA5SP327-201ENST00000362494 101 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 SNORA63.5-201ENST00000363548 123 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-1107P-201ENST00000364817 104 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 Y_RNA.299-201ENST00000364973 94 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 Y_RNA.323-201ENST00000365157 109 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 SNORA32-201ENST00000384072 121 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 SNORA18-201ENST00000384416 132 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 SNORD12-201ENST00000391002 90 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 AL591704.2-201ENST00000421658 181 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 AC087343.1-201ENST00000477341 475 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 SNORD79.1-201ENST00000516069 84 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 MIR4295-201ENST00000585286 85 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-94P-201ENST00000607728 107 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 MIR6740-201ENST00000618268 113 ntBASIC1.42□□□□□ -2.18
NR2E3Q9Y5X4 RNA5SP457-201ENST00000363657 124 ntBASIC1.41□□□□□ -2.18
NR2E3Q9Y5X4 U8.6-201ENST00000364939 135 ntBASIC1.41□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-616P-201ENST00000384353 107 ntBASIC1.41□□□□□ -2.18
NR2E3Q9Y5X4 MT-TN-201ENST00000387400 73 ntBASIC1.41□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-1307P-201ENST00000391012 103 ntBASIC1.41□□□□□ -2.18
NR2E3Q9Y5X4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.41□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-613P-201ENST00000410412 108 ntBASIC1.41□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-554P-201ENST00000410466 106 ntBASIC1.41□□□□□ -2.18
NR2E3Q9Y5X4 snoU13.2-201ENST00000459201 104 ntBASIC1.41□□□□□ -2.18
NR2E3Q9Y5X4 RPL39P34-201ENST00000477141 156 ntBASIC1.41□□□□□ -2.18
NR2E3Q9Y5X4 RNU6-580P-201ENST00000365159 107 ntBASIC1.4□□□□□ -2.19
NR2E3Q9Y5X4 SNORA25-201ENST00000384384 134 ntBASIC1.4□□□□□ -2.19
NR2E3Q9Y5X4 MIR759-201ENST00000390224 91 ntBASIC1.4□□□□□ -2.19
NR2E3Q9Y5X4 SNORA75.2-201ENST00000391138 150 ntBASIC1.4□□□□□ -2.19
NR2E3Q9Y5X4 SNORA75.3-201ENST00000391231 150 ntBASIC1.4□□□□□ -2.19
NR2E3Q9Y5X4 MTATP6P29-201ENST00000415057 132 ntBASIC1.4□□□□□ -2.19
NR2E3Q9Y5X4 AC068339.1-201ENST00000526965 141 ntBASIC1.4□□□□□ -2.19
NR2E3Q9Y5X4 AC068338.1-201ENST00000565567 176 ntBASIC1.4□□□□□ -2.19
NR2E3Q9Y5X4 uc_338.28-201ENST00000612082 187 ntBASIC1.4□□□□□ -2.19
NR2E3Q9Y5X4 AL162726.3-218ENST00000636401 95 ntBASIC1.4□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-1014P-201ENST00000383940 103 ntBASIC1.39□□□□□ -2.19
NR2E3Q9Y5X4 MIR193B-201ENST00000384907 83 ntBASIC1.39□□□□□ -2.19
NR2E3Q9Y5X4 RNA5SP95-201ENST00000410319 137 ntBASIC1.39□□□□□ -2.19
NR2E3Q9Y5X4 RNU7-21P-201ENST00000459430 62 ntBASIC1.39□□□□□ -2.19
NR2E3Q9Y5X4 Y_RNA.681-201ENST00000516445 113 ntBASIC1.39□□□□□ -2.19
NR2E3Q9Y5X4 MIR5009-201ENST00000578736 100 ntBASIC1.39□□□□□ -2.19
NR2E3Q9Y5X4 MIR4264-201ENST00000583520 66 ntBASIC1.39□□□□□ -2.19
NR2E3Q9Y5X4 AP000753.3-201ENST00000604083 169 ntBASIC1.39□□□□□ -2.19
NR2E3Q9Y5X4 AL589743.1-201ENST00000551932 2712 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 MIR377-201ENST00000362145 69 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 RNY1P13-201ENST00000365030 105 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-147P-201ENST00000383983 107 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 Y_RNA.433-201ENST00000384089 102 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-205P-201ENST00000390858 107 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 AC096949.1-201ENST00000412047 152 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 RNU7-79P-201ENST00000516082 62 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-412P-201ENST00000516434 106 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 AC141846.1-201ENST00000568348 142 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 AL662814.1-201ENST00000617364 121 ntBASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
NR2E3Q9Y5X4 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
NR2E3Q9Y5X4 MIR30D-201ENST00000362283 70 ntBASIC1.37□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-363P-201ENST00000362895 105 ntBASIC1.37□□□□□ -2.19
NR2E3Q9Y5X4 MIR588-201ENST00000384900 83 ntBASIC1.37□□□□□ -2.19
NR2E3Q9Y5X4 MRPL35P3-201ENST00000421557 364 ntBASIC1.37□□□□□ -2.19
NR2E3Q9Y5X4 RNU7-90P-201ENST00000459216 62 ntBASIC1.37□□□□□ -2.19
NR2E3Q9Y5X4 MIR1273G-201ENST00000577677 100 ntBASIC1.37□□□□□ -2.19
NR2E3Q9Y5X4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.37□□□□□ -2.19
NR2E3Q9Y5X4 AC027335.2-201ENST00000624030 375 ntBASIC1.37□□□□□ -2.19
NR2E3Q9Y5X4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.36□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-816P-201ENST00000390914 107 ntBASIC1.36□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-679P-201ENST00000391003 106 ntBASIC1.36□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-1268P-201ENST00000391214 107 ntBASIC1.36□□□□□ -2.19
NR2E3Q9Y5X4 RNU6-1239P-201ENST00000391310 107 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms