Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 COX6CP6-201ENST00000490840 228 ntBASIC0.93□□□□□ -2.26
COL4A3BPQ9Y5P4 RNA5SP220-201ENST00000516298 104 ntBASIC0.93□□□□□ -2.26
COL4A3BPQ9Y5P4 MTND5P41-201ENST00000517498 206 ntBASIC0.93□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR3612-201ENST00000579753 87 ntBASIC0.93□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-508P-201ENST00000363231 103 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 SNORD114-2-201ENST00000363953 78 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-647P-201ENST00000364243 107 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR569-201ENST00000385228 96 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 SNORD77B-201ENST00000391112 67 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU4-69P-201ENST00000410677 143 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-765P-201ENST00000516916 99 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 RNU6-448P-201ENST00000517052 107 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 AC008608.1-201ENST00000603910 127 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 U7.2-201ENST00000607576 63 ntBASIC0.92□□□□□ -2.26
COL4A3BPQ9Y5P4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.91□□□□□ -2.26
COL4A3BPQ9Y5P4 SNORD100-201ENST00000408573 76 ntBASIC0.91□□□□□ -2.26
COL4A3BPQ9Y5P4 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR6082-201ENST00000613604 109 ntBASIC0.91□□□□□ -2.26
COL4A3BPQ9Y5P4 MIR8066-201ENST00000617280 78 ntBASIC0.91□□□□□ -2.26
COL4A3BPQ9Y5P4 AL589743.1-201ENST00000551932 2712 ntBASIC0.9□□□□□ -2.26
COL4A3BPQ9Y5P4 HSBP1P2-201ENST00000299671 229 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.170-201ENST00000363746 110 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.343-201ENST00000365354 112 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 SNORA36.2-201ENST00000384004 127 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 SNORA72.6-201ENST00000384520 129 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU7-200P-201ENST00000516105 62 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 RNY4P20-201ENST00000516678 93 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR4491-201ENST00000581087 68 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR6734-201ENST00000621166 68 ntBASIC0.9□□□□□ -2.27
COL4A3BPQ9Y5P4 RNA5SP117-201ENST00000365294 118 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-209P-201ENST00000384118 107 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-42P-201ENST00000384165 107 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-907P-201ENST00000390924 102 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 AC004941.2-201ENST00000427009 228 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 AC108081.1-201ENST00000604358 221 ntBASIC0.89□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.13-201ENST00000362403 112 ntBASIC0.88□□□□□ -2.27
COL4A3BPQ9Y5P4 SNORD114-10-201ENST00000363409 72 ntBASIC0.88□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.88□□□□□ -2.27
COL4A3BPQ9Y5P4 snoU13.18-201ENST00000459483 104 ntBASIC0.88□□□□□ -2.27
COL4A3BPQ9Y5P4 AC002350.1-201ENST00000490759 375 ntBASIC0.88□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR18A-201ENST00000362310 71 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.114-201ENST00000363265 113 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 Y_RNA.118-201ENST00000363300 101 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 RNY1P5-201ENST00000383890 115 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 AL606490.4-201ENST00000423117 127 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 AC133485.1-201ENST00000567176 124 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 AC013244.2-201ENST00000603396 103 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 TUG1_4.1-201ENST00000619464 181 ntBASIC0.87□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR140-201ENST00000385282 100 ntBASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU7-137P-201ENST00000516788 62 ntBASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 AL590095.2-201ENST00000604136 117 ntBASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 AC022709.1-201ENST00000615967 87 ntBASIC0.86□□□□□ -2.27
COL4A3BPQ9Y5P4 AC096949.1-201ENST00000412047 152 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-1194P-201ENST00000516208 104 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU6-426P-201ENST00000516464 97 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 SNORD67.1-201ENST00000516618 108 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 DEFB131E-201ENST00000532329 154 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
COL4A3BPQ9Y5P4 RNU4-58P-201ENST00000363192 141 ntBASIC0.84□□□□□ -2.27
COL4A3BPQ9Y5P4 MIR759-201ENST00000390224 91 ntBASIC0.84□□□□□ -2.27
COL4A3BPQ9Y5P4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR548I1-201ENST00000408810 149 ntBASIC0.83□□□□□ -2.28
COL4A3BPQ9Y5P4 RNA5SP136-201ENST00000410906 107 ntBASIC0.83□□□□□ -2.28
COL4A3BPQ9Y5P4 RN7SKP19-201ENST00000516016 252 ntBASIC0.83□□□□□ -2.28
COL4A3BPQ9Y5P4 RNU6-469P-201ENST00000516253 101 ntBASIC0.83□□□□□ -2.28
COL4A3BPQ9Y5P4 RNU6-255P-201ENST00000516957 105 ntBASIC0.83□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 RNA5SP121-201ENST00000516537 101 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 AC018659.1-201ENST00000551083 169 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR5000-201ENST00000577717 103 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.82□□□□□ -2.28
COL4A3BPQ9Y5P4 RNA5SP133-201ENST00000363368 119 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.213-201ENST00000364178 111 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR489-201ENST00000384923 84 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 AL158147.1-201ENST00000443970 75 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 SNORA25.16-201ENST00000516741 121 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.697-201ENST00000516776 113 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 AC022523.2-201ENST00000561045 150 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 U6.109-201ENST00000636749 87 ntBASIC0.81□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 SNORA40-201ENST00000388090 126 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 RNU6-135P-201ENST00000516769 101 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR3163-201ENST00000581592 73 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR7111-201ENST00000619751 72 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 uc_338.16-201ENST00000621804 95 ntBASIC0.8□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.617-201ENST00000410920 90 ntBASIC0.79□□□□□ -2.28
COL4A3BPQ9Y5P4 AC138907.6-201ENST00000568401 126 ntBASIC0.79□□□□□ -2.28
COL4A3BPQ9Y5P4 AL359881.1-201ENST00000602916 267 ntBASIC0.79□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.536-201ENST00000384621 113 ntBASIC0.78□□□□□ -2.28
COL4A3BPQ9Y5P4 Y_RNA.568-201ENST00000384742 113 ntBASIC0.78□□□□□ -2.28
COL4A3BPQ9Y5P4 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms