Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 MIR4679-2-201ENST00000578358 77 ntBASIC1.17□□□□□ -2.22
PCDHA3Q9Y5H8 AL670379.3-201ENST00000605040 251 ntBASIC1.17□□□□□ -2.22
PCDHA3Q9Y5H8 RNU6-834P-201ENST00000362367 110 ntBASIC1.16□□□□□ -2.22
PCDHA3Q9Y5H8 RNU6-369P-201ENST00000362515 102 ntBASIC1.16□□□□□ -2.22
PCDHA3Q9Y5H8 MIR548A3-201ENST00000385297 97 ntBASIC1.16□□□□□ -2.22
PCDHA3Q9Y5H8 U7.7-201ENST00000459276 60 ntBASIC1.16□□□□□ -2.22
PCDHA3Q9Y5H8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.16□□□□□ -2.22
PCDHA3Q9Y5H8 SNORD67.1-201ENST00000516618 108 ntBASIC1.16□□□□□ -2.22
PCDHA3Q9Y5H8 RNU7-137P-201ENST00000516788 62 ntBASIC1.16□□□□□ -2.22
PCDHA3Q9Y5H8 MIR4771-2-201ENST00000577758 74 ntBASIC1.16□□□□□ -2.22
PCDHA3Q9Y5H8 MIR4771-1-201ENST00000582617 74 ntBASIC1.16□□□□□ -2.22
PCDHA3Q9Y5H8 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.16□□□□□ -2.22
PCDHA3Q9Y5H8 AC023934.1-201ENST00000574529 2389 ntBASIC1.15□□□□□ -2.22
PCDHA3Q9Y5H8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PCDHA3Q9Y5H8 RNA5SP247-201ENST00000411181 105 ntBASIC1.15□□□□□ -2.23
PCDHA3Q9Y5H8 RPL39P25-201ENST00000449384 154 ntBASIC1.15□□□□□ -2.23
PCDHA3Q9Y5H8 AC020891.4-201ENST00000605745 93 ntBASIC1.15□□□□□ -2.23
PCDHA3Q9Y5H8 AL136317.1-201ENST00000612653 226 ntBASIC1.15□□□□□ -2.23
PCDHA3Q9Y5H8 MIR8070-201ENST00000616510 88 ntBASIC1.15□□□□□ -2.23
PCDHA3Q9Y5H8 RNU1-36P-201ENST00000365130 165 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-616P-201ENST00000384353 107 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 MIR125B2-201ENST00000385128 89 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 MIR942-201ENST00000401111 86 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 MIR1257-201ENST00000408490 117 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-447P-201ENST00000410293 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-1118P-201ENST00000410382 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-1076P-201ENST00000410397 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-355P-201ENST00000410427 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-791P-201ENST00000410467 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-705P-201ENST00000410601 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-1100P-201ENST00000410691 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-860P-201ENST00000410860 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-1217P-201ENST00000411276 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-785P-201ENST00000411324 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 AC096949.1-201ENST00000412047 152 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 AC007012.1-201ENST00000567192 175 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 MIR4676-201ENST00000583078 72 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 U6.90-201ENST00000614007 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 U6.70-201ENST00000620287 104 ntBASIC1.14□□□□□ -2.23
PCDHA3Q9Y5H8 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
PCDHA3Q9Y5H8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
PCDHA3Q9Y5H8 MIR100-201ENST00000385259 80 ntBASIC1.13□□□□□ -2.23
PCDHA3Q9Y5H8 SNORD93-201ENST00000408813 74 ntBASIC1.13□□□□□ -2.23
PCDHA3Q9Y5H8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.13□□□□□ -2.23
PCDHA3Q9Y5H8 Y_RNA.773-201ENST00000607168 90 ntBASIC1.13□□□□□ -2.23
PCDHA3Q9Y5H8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.13□□□□□ -2.23
PCDHA3Q9Y5H8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.13□□□□□ -2.23
PCDHA3Q9Y5H8 AL589743.1-201ENST00000551932 2712 ntBASIC1.13□□□□□ -2.23
PCDHA3Q9Y5H8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
PCDHA3Q9Y5H8 SNORA25.9-201ENST00000365087 128 ntBASIC1.12□□□□□ -2.23
PCDHA3Q9Y5H8 SNORD115-35-201ENST00000365122 82 ntBASIC1.12□□□□□ -2.23
PCDHA3Q9Y5H8 Y_RNA.344-201ENST00000365381 112 ntBASIC1.12□□□□□ -2.23
PCDHA3Q9Y5H8 Y_RNA.362-201ENST00000365518 110 ntBASIC1.12□□□□□ -2.23
PCDHA3Q9Y5H8 RPL39P34-201ENST00000477141 156 ntBASIC1.12□□□□□ -2.23
PCDHA3Q9Y5H8 RNU7-2P-201ENST00000516096 62 ntBASIC1.12□□□□□ -2.23
PCDHA3Q9Y5H8 MIR4804-201ENST00000581683 73 ntBASIC1.12□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-1144P-201ENST00000384247 104 ntBASIC1.11□□□□□ -2.23
PCDHA3Q9Y5H8 MIR206-201ENST00000384872 86 ntBASIC1.11□□□□□ -2.23
PCDHA3Q9Y5H8 MIR548A1-201ENST00000385041 97 ntBASIC1.11□□□□□ -2.23
PCDHA3Q9Y5H8 MIR938-201ENST00000401216 83 ntBASIC1.11□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-977P-201ENST00000516411 103 ntBASIC1.11□□□□□ -2.23
PCDHA3Q9Y5H8 MIR548AI-201ENST00000579940 88 ntBASIC1.11□□□□□ -2.23
PCDHA3Q9Y5H8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
PCDHA3Q9Y5H8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-363P-201ENST00000362895 105 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 Y_RNA.226-201ENST00000364337 114 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-53P-201ENST00000365367 106 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 MIR499A-201ENST00000384903 122 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 SNORD89-201ENST00000390981 114 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 Y_RNA.588-201ENST00000391254 102 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-1064P-201ENST00000410626 104 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 AC015818.7-201ENST00000428754 109 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 AC087499.7-201ENST00000441958 109 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 RNA5SP255-201ENST00000516370 107 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 AC133485.1-201ENST00000567176 124 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 MIR4491-201ENST00000581087 68 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 AC025627.3-201ENST00000582078 182 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 SNORD92-201ENST00000585078 85 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
PCDHA3Q9Y5H8 Y_RNA.273-201ENST00000364703 102 ntBASIC1.09□□□□□ -2.23
PCDHA3Q9Y5H8 Y_RNA.291-201ENST00000364886 113 ntBASIC1.09□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-1056P-201ENST00000383996 107 ntBASIC1.09□□□□□ -2.23
PCDHA3Q9Y5H8 RNU6-476P-201ENST00000384726 107 ntBASIC1.09□□□□□ -2.23
PCDHA3Q9Y5H8 MIR1287-201ENST00000408492 90 ntBASIC1.09□□□□□ -2.23
PCDHA3Q9Y5H8 RNU7-56P-201ENST00000458744 62 ntBASIC1.09□□□□□ -2.23
PCDHA3Q9Y5H8 RNU7-156P-201ENST00000517214 74 ntBASIC1.09□□□□□ -2.23
PCDHA3Q9Y5H8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.09□□□□□ -2.23
PCDHA3Q9Y5H8 Y_RNA.85-201ENST00000363014 111 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 RNY1P2-201ENST00000364820 117 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 SNORD116-21-201ENST00000384507 92 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 RNU6-880P-201ENST00000384526 107 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 RNU6-1321P-201ENST00000390905 107 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 RNU4-83P-201ENST00000410863 133 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 PDCD5P2-201ENST00000507570 312 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 MTND5P34-201ENST00000568888 325 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 MIR4661-201ENST00000582720 75 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 RMST_2.1-201ENST00000617263 136 ntBASIC1.08□□□□□ -2.24
PCDHA3Q9Y5H8 AC105081.1-201ENST00000617727 106 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms