Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 U6.70-201ENST00000620287 104 ntBASIC1.18□□□□□ -2.22
PCDHGA9Q9Y5G4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PCDHGA9Q9Y5G4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PCDHGA9Q9Y5G4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
PCDHGA9Q9Y5G4 Y_RNA.127-201ENST00000363386 109 ntBASIC1.17□□□□□ -2.22
PCDHGA9Q9Y5G4 RNU1-93P-201ENST00000364704 169 ntBASIC1.17□□□□□ -2.22
PCDHGA9Q9Y5G4 SNORA32-201ENST00000384072 121 ntBASIC1.17□□□□□ -2.22
PCDHGA9Q9Y5G4 SNORD93-201ENST00000408813 74 ntBASIC1.17□□□□□ -2.22
PCDHGA9Q9Y5G4 RNU6-977P-201ENST00000516411 103 ntBASIC1.17□□□□□ -2.22
PCDHGA9Q9Y5G4 RNU6-659P-201ENST00000516454 104 ntBASIC1.17□□□□□ -2.22
PCDHGA9Q9Y5G4 FAM71BP1-201ENST00000604431 523 ntBASIC1.17□□□□□ -2.22
PCDHGA9Q9Y5G4 MTND5P18-201ENST00000445624 1801 ntBASIC1.17□□□□□ -2.22
PCDHGA9Q9Y5G4 MIR96-201ENST00000362288 78 ntBASIC1.16□□□□□ -2.22
PCDHGA9Q9Y5G4 Y_RNA.218-201ENST00000364218 104 ntBASIC1.16□□□□□ -2.22
PCDHGA9Q9Y5G4 MIR938-201ENST00000401216 83 ntBASIC1.16□□□□□ -2.22
PCDHGA9Q9Y5G4 PDCD5P2-201ENST00000507570 312 ntBASIC1.16□□□□□ -2.22
PCDHGA9Q9Y5G4 UBL5P1-201ENST00000507979 193 ntBASIC1.16□□□□□ -2.22
PCDHGA9Q9Y5G4 RNU7-6P-201ENST00000516845 62 ntBASIC1.16□□□□□ -2.22
PCDHGA9Q9Y5G4 RNU6-1234P-201ENST00000516877 103 ntBASIC1.16□□□□□ -2.22
PCDHGA9Q9Y5G4 MIR6734-201ENST00000621166 68 ntBASIC1.16□□□□□ -2.22
PCDHGA9Q9Y5G4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU6-1104P-201ENST00000384723 104 ntBASIC1.15□□□□□ -2.23
PCDHGA9Q9Y5G4 MIR125B2-201ENST00000385128 89 ntBASIC1.15□□□□□ -2.23
PCDHGA9Q9Y5G4 MIR3914-2-201ENST00000637339 95 ntBASIC1.15□□□□□ -2.23
PCDHGA9Q9Y5G4 SNORD89-201ENST00000390981 114 ntBASIC1.14□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU7-107P-201ENST00000459121 61 ntBASIC1.14□□□□□ -2.23
PCDHGA9Q9Y5G4 snoU13.21-201ENST00000459368 105 ntBASIC1.14□□□□□ -2.23
PCDHGA9Q9Y5G4 RNA5SP255-201ENST00000516370 107 ntBASIC1.14□□□□□ -2.23
PCDHGA9Q9Y5G4 AC022523.2-201ENST00000561045 150 ntBASIC1.14□□□□□ -2.23
PCDHGA9Q9Y5G4 MIR4676-201ENST00000583078 72 ntBASIC1.14□□□□□ -2.23
PCDHGA9Q9Y5G4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
PCDHGA9Q9Y5G4 uc_338.6-201ENST00000613544 171 ntBASIC1.14□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU1-36P-201ENST00000365130 165 ntBASIC1.13□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU6-364P-201ENST00000384387 107 ntBASIC1.13□□□□□ -2.23
PCDHGA9Q9Y5G4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.13□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU6-1333P-201ENST00000516162 93 ntBASIC1.13□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU6-406P-201ENST00000516470 107 ntBASIC1.13□□□□□ -2.23
PCDHGA9Q9Y5G4 AC133485.1-201ENST00000567176 124 ntBASIC1.13□□□□□ -2.23
PCDHGA9Q9Y5G4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.13□□□□□ -2.23
PCDHGA9Q9Y5G4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.13□□□□□ -2.23
PCDHGA9Q9Y5G4 SNORD115-19-201ENST00000363098 82 ntBASIC1.12□□□□□ -2.23
PCDHGA9Q9Y5G4 SNORD115-18-201ENST00000363293 82 ntBASIC1.12□□□□□ -2.23
PCDHGA9Q9Y5G4 SNORD115-17-201ENST00000364612 82 ntBASIC1.12□□□□□ -2.23
PCDHGA9Q9Y5G4 SNORD113-1-201ENST00000365321 69 ntBASIC1.12□□□□□ -2.23
PCDHGA9Q9Y5G4 Y_RNA.563-201ENST00000384707 108 ntBASIC1.12□□□□□ -2.23
PCDHGA9Q9Y5G4 U8.15-201ENST00000390947 134 ntBASIC1.12□□□□□ -2.23
PCDHGA9Q9Y5G4 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
PCDHGA9Q9Y5G4 MIR4804-201ENST00000581683 73 ntBASIC1.12□□□□□ -2.23
PCDHGA9Q9Y5G4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.12□□□□□ -2.23
PCDHGA9Q9Y5G4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
PCDHGA9Q9Y5G4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
PCDHGA9Q9Y5G4 SNORD105-201ENST00000386910 85 ntBASIC1.11□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU1-119P-201ENST00000391122 165 ntBASIC1.11□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU6-479P-201ENST00000516348 105 ntBASIC1.11□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU7-137P-201ENST00000516788 62 ntBASIC1.11□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU7-156P-201ENST00000517214 74 ntBASIC1.11□□□□□ -2.23
PCDHGA9Q9Y5G4 AC020891.4-201ENST00000605745 93 ntBASIC1.11□□□□□ -2.23
PCDHGA9Q9Y5G4 AC022709.1-201ENST00000615967 87 ntBASIC1.11□□□□□ -2.23
PCDHGA9Q9Y5G4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.1□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU6-22P-201ENST00000384355 107 ntBASIC1.1□□□□□ -2.23
PCDHGA9Q9Y5G4 MIR520F-201ENST00000384824 87 ntBASIC1.1□□□□□ -2.23
PCDHGA9Q9Y5G4 MIR548D2-201ENST00000384955 97 ntBASIC1.1□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU4-83P-201ENST00000410863 133 ntBASIC1.1□□□□□ -2.23
PCDHGA9Q9Y5G4 SNORD67.1-201ENST00000516618 108 ntBASIC1.1□□□□□ -2.23
PCDHGA9Q9Y5G4 SNORD92-201ENST00000585078 85 ntBASIC1.1□□□□□ -2.23
PCDHGA9Q9Y5G4 AC087741.2-201ENST00000619415 172 ntBASIC1.1□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU7-56P-201ENST00000458744 62 ntBASIC1.09□□□□□ -2.23
PCDHGA9Q9Y5G4 Y_RNA.649-201ENST00000459077 103 ntBASIC1.09□□□□□ -2.23
PCDHGA9Q9Y5G4 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
PCDHGA9Q9Y5G4 MIR4679-2-201ENST00000578358 77 ntBASIC1.09□□□□□ -2.23
PCDHGA9Q9Y5G4 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
PCDHGA9Q9Y5G4 RNU6-369P-201ENST00000362515 102 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 Y_RNA.98-201ENST00000363109 102 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 MIR520E-201ENST00000384867 87 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 MIR548A3-201ENST00000385297 97 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 Y_RNA.630-201ENST00000411370 108 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU7-2P-201ENST00000516096 62 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU6-313P-201ENST00000516317 112 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU6-765P-201ENST00000516916 99 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 AL670379.3-201ENST00000605040 251 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 MIR6788-201ENST00000618842 66 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 AL589743.1-201ENST00000551932 2712 ntBASIC1.08□□□□□ -2.24
PCDHGA9Q9Y5G4 SNORD115-35-201ENST00000365122 82 ntBASIC1.07□□□□□ -2.24
PCDHGA9Q9Y5G4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU6-1168P-201ENST00000390831 104 ntBASIC1.07□□□□□ -2.24
PCDHGA9Q9Y5G4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.07□□□□□ -2.24
PCDHGA9Q9Y5G4 MIR4491-201ENST00000581087 68 ntBASIC1.07□□□□□ -2.24
PCDHGA9Q9Y5G4 MIR151B-201ENST00000584249 96 ntBASIC1.07□□□□□ -2.24
PCDHGA9Q9Y5G4 AL359881.1-201ENST00000602916 267 ntBASIC1.07□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU6-834P-201ENST00000362367 110 ntBASIC1.06□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU6-403P-201ENST00000363163 104 ntBASIC1.06□□□□□ -2.24
PCDHGA9Q9Y5G4 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
PCDHGA9Q9Y5G4 RNY1P2-201ENST00000364820 117 ntBASIC1.06□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU6-616P-201ENST00000384353 107 ntBASIC1.06□□□□□ -2.24
PCDHGA9Q9Y5G4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.06□□□□□ -2.24
PCDHGA9Q9Y5G4 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
PCDHGA9Q9Y5G4 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 274.5 ms