Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MIR6854-201ENST00000614935 69 ntBASIC-1.54□□□□□ -2.66
VPS29Q9UBQ0 MIR8068-201ENST00000618032 68 ntBASIC-1.54□□□□□ -2.66
VPS29Q9UBQ0 AC048344.4-201ENST00000619744 527 ntBASIC-1.54□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.55□□□□□ -2.66
VPS29Q9UBQ0 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.55□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.55□□□□□ -2.66
VPS29Q9UBQ0 SNORD74.6-201ENST00000364796 70 ntBASIC-1.55□□□□□ -2.66
VPS29Q9UBQ0 MIR548I2-201ENST00000408348 149 ntBASIC-1.55□□□□□ -2.66
VPS29Q9UBQ0 MIR2113-201ENST00000459007 91 ntBASIC-1.55□□□□□ -2.66
VPS29Q9UBQ0 MIR4306-201ENST00000583390 91 ntBASIC-1.55□□□□□ -2.66
VPS29Q9UBQ0 MIR5690-201ENST00000583739 73 ntBASIC-1.55□□□□□ -2.66
VPS29Q9UBQ0 MIR382-201ENST00000637119 76 ntBASIC-1.55□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.56□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.56□□□□□ -2.66
VPS29Q9UBQ0 MIR147A-201ENST00000385079 72 ntBASIC-1.56□□□□□ -2.66
VPS29Q9UBQ0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
VPS29Q9UBQ0 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.56□□□□□ -2.66
VPS29Q9UBQ0 RNA5SP144-201ENST00000410846 116 ntBASIC-1.56□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.56□□□□□ -2.66
VPS29Q9UBQ0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.56□□□□□ -2.66
VPS29Q9UBQ0 U8.20-201ENST00000459445 131 ntBASIC-1.56□□□□□ -2.66
VPS29Q9UBQ0 MIR6086-201ENST00000638065 55 ntBASIC-1.56□□□□□ -2.66
VPS29Q9UBQ0 RNU6-30P-201ENST00000384561 107 ntBASIC-1.57□□□□□ -2.66
VPS29Q9UBQ0 SNORD115-2-201ENST00000362842 82 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 SNORD115-20-201ENST00000365099 82 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 RNU6-476P-201ENST00000384726 107 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 MIR559-201ENST00000385188 96 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 SNRPGP8-201ENST00000454064 226 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 MTND4P17-201ENST00000470444 350 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 RNU6-570P-201ENST00000517051 105 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 MIR3115-201ENST00000577915 68 ntBASIC-1.58□□□□□ -2.66
VPS29Q9UBQ0 RNU6-905P-201ENST00000384434 107 ntBASIC-1.59□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.59□□□□□ -2.66
VPS29Q9UBQ0 snoU13.19-201ENST00000459148 104 ntBASIC-1.59□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.59□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.59□□□□□ -2.66
VPS29Q9UBQ0 MIR4760-201ENST00000585040 80 ntBASIC-1.59□□□□□ -2.66
VPS29Q9UBQ0 AL365205.2-201ENST00000594586 68 ntBASIC-1.59□□□□□ -2.66
VPS29Q9UBQ0 AL008718.3-201ENST00000610217 321 ntBASIC-1.59□□□□□ -2.66
VPS29Q9UBQ0 RNU6-170P-201ENST00000362832 104 ntBASIC-1.6□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.6□□□□□ -2.67
VPS29Q9UBQ0 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.6□□□□□ -2.67
VPS29Q9UBQ0 RNU7-106P-201ENST00000459514 67 ntBASIC-1.6□□□□□ -2.67
VPS29Q9UBQ0 RNU6-287P-201ENST00000516230 98 ntBASIC-1.6□□□□□ -2.67
VPS29Q9UBQ0 RNU6-699P-201ENST00000517081 110 ntBASIC-1.6□□□□□ -2.67
VPS29Q9UBQ0 snoU83B.1-201ENST00000517136 88 ntBASIC-1.6□□□□□ -2.67
VPS29Q9UBQ0 AC245505.1-201ENST00000556398 224 ntBASIC-1.6□□□□□ -2.67
VPS29Q9UBQ0 MIR548AE2-201ENST00000583456 67 ntBASIC-1.6□□□□□ -2.67
VPS29Q9UBQ0 RNU6-571P-201ENST00000384128 107 ntBASIC-1.61□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.61□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.61□□□□□ -2.67
VPS29Q9UBQ0 AL731563.1-201ENST00000442202 214 ntBASIC-1.61□□□□□ -2.67
VPS29Q9UBQ0 RNY1P9-201ENST00000532431 109 ntBASIC-1.61□□□□□ -2.67
VPS29Q9UBQ0 AC007012.1-201ENST00000567192 175 ntBASIC-1.61□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 SNORD113-8-201ENST00000363497 74 ntBASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 SERF1AP1-201ENST00000514575 187 ntBASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 RNU6-358P-201ENST00000516564 75 ntBASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 PART1_1.1-201ENST00000611761 217 ntBASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.62□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.63□□□□□ -2.67
VPS29Q9UBQ0 RNY1P6-201ENST00000384193 109 ntBASIC-1.63□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.63□□□□□ -2.67
VPS29Q9UBQ0 RNU6-102P-201ENST00000384485 104 ntBASIC-1.63□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.63□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.63□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.63□□□□□ -2.67
VPS29Q9UBQ0 SNORD18.2-201ENST00000459604 70 ntBASIC-1.63□□□□□ -2.67
VPS29Q9UBQ0 SCARNA15-202ENST00000516881 127 ntBASIC-1.63□□□□□ -2.67
VPS29Q9UBQ0 AL138825.1-201ENST00000618587 192 ntBASIC-1.63□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.64□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.64□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.64□□□□□ -2.67
VPS29Q9UBQ0 MT-TT-201ENST00000387460 66 ntBASIC-1.64□□□□□ -2.67
VPS29Q9UBQ0 AL353813.1-201ENST00000440700 253 ntBASIC-1.64□□□□□ -2.67
VPS29Q9UBQ0 HSPE1P25-201ENST00000455484 251 ntBASIC-1.64□□□□□ -2.67
VPS29Q9UBQ0 RNU7-48P-201ENST00000458875 63 ntBASIC-1.64□□□□□ -2.67
VPS29Q9UBQ0 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.64□□□□□ -2.67
VPS29Q9UBQ0 RNA5SP67-201ENST00000516422 131 ntBASIC-1.64□□□□□ -2.67
VPS29Q9UBQ0 RNU7-30P-201ENST00000516835 62 ntBASIC-1.64□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.65□□□□□ -2.67
VPS29Q9UBQ0 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.65□□□□□ -2.67
VPS29Q9UBQ0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.65□□□□□ -2.67
VPS29Q9UBQ0 SNORD2-201ENST00000459163 69 ntBASIC-1.65□□□□□ -2.67
VPS29Q9UBQ0 AC082651.2-201ENST00000496833 166 ntBASIC-1.65□□□□□ -2.67
VPS29Q9UBQ0 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.65□□□□□ -2.67
VPS29Q9UBQ0 SNORD116.3-201ENST00000517176 78 ntBASIC-1.65□□□□□ -2.67
VPS29Q9UBQ0 RNU4-90P-201ENST00000362773 141 ntBASIC-1.66□□□□□ -2.68
VPS29Q9UBQ0 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.66□□□□□ -2.68
VPS29Q9UBQ0 RNU6-662P-201ENST00000384253 104 ntBASIC-1.66□□□□□ -2.68
VPS29Q9UBQ0 RNU6-130P-201ENST00000411112 103 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms