Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MT-TI-201ENST00000387365 69 ntBASIC1.03□□□□□ -2.24
LRFN1Q9P244 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.03□□□□□ -2.24
LRFN1Q9P244 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
LRFN1Q9P244 MIR1-1-201ENST00000362147 71 ntBASIC1.02□□□□□ -2.25
LRFN1Q9P244 RNA5SP325-201ENST00000363756 130 ntBASIC1.02□□□□□ -2.25
LRFN1Q9P244 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
LRFN1Q9P244 AC008267.6-201ENST00000441664 139 ntBASIC1.02□□□□□ -2.25
LRFN1Q9P244 MTND5P18-201ENST00000445624 1801 ntBASIC1.02□□□□□ -2.25
LRFN1Q9P244 COX6CP6-201ENST00000490840 228 ntBASIC1.02□□□□□ -2.25
LRFN1Q9P244 RNU6-62P-201ENST00000516526 102 ntBASIC1.02□□□□□ -2.25
LRFN1Q9P244 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.02□□□□□ -2.25
LRFN1Q9P244 MIR548AE2-201ENST00000583456 67 ntBASIC1.02□□□□□ -2.25
LRFN1Q9P244 uc_338.6-201ENST00000613544 171 ntBASIC1.02□□□□□ -2.25
LRFN1Q9P244 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
LRFN1Q9P244 Y_RNA.198-201ENST00000364013 98 ntBASIC1.01□□□□□ -2.25
LRFN1Q9P244 RNU6-934P-201ENST00000365154 107 ntBASIC1.01□□□□□ -2.25
LRFN1Q9P244 SNORA32-201ENST00000384072 121 ntBASIC1.01□□□□□ -2.25
LRFN1Q9P244 MIR563-201ENST00000385080 79 ntBASIC1.01□□□□□ -2.25
LRFN1Q9P244 RNU6-1165P-201ENST00000410119 107 ntBASIC1.01□□□□□ -2.25
LRFN1Q9P244 snoU13.21-201ENST00000459368 105 ntBASIC1.01□□□□□ -2.25
LRFN1Q9P244 AC025627.3-201ENST00000582078 182 ntBASIC1.01□□□□□ -2.25
LRFN1Q9P244 MIR3914-2-201ENST00000637339 95 ntBASIC1.01□□□□□ -2.25
LRFN1Q9P244 MIR30D-201ENST00000362283 70 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 RNU6-369P-201ENST00000362515 102 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 Y_RNA.299-201ENST00000364973 94 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 Y_RNA.346-201ENST00000365385 112 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 RNU6-1168P-201ENST00000390831 104 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 SNORD89-201ENST00000390981 114 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 RNA5SP237-201ENST00000410414 113 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 RNU4-69P-201ENST00000410677 143 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 MIR18B-201ENST00000454574 71 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 RNU7-35P-201ENST00000517174 62 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 U2.22-201ENST00000636441 106 ntBASIC1□□□□□ -2.25
LRFN1Q9P244 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
LRFN1Q9P244 MIR100-201ENST00000385259 80 ntBASIC0.99□□□□□ -2.25
LRFN1Q9P244 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.99□□□□□ -2.25
LRFN1Q9P244 RNU6-735P-201ENST00000410612 107 ntBASIC0.99□□□□□ -2.25
LRFN1Q9P244 RPS26P5-201ENST00000418544 335 ntBASIC0.99□□□□□ -2.25
LRFN1Q9P244 MIR1270-201ENST00000459320 83 ntBASIC0.99□□□□□ -2.25
LRFN1Q9P244 RNU7-79P-201ENST00000516082 62 ntBASIC0.99□□□□□ -2.25
LRFN1Q9P244 AC141846.1-201ENST00000568348 142 ntBASIC0.99□□□□□ -2.25
LRFN1Q9P244 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.99□□□□□ -2.25
LRFN1Q9P244 AL662814.1-201ENST00000617364 121 ntBASIC0.99□□□□□ -2.25
LRFN1Q9P244 Y_RNA.213-201ENST00000364178 111 ntBASIC0.98□□□□□ -2.25
LRFN1Q9P244 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
LRFN1Q9P244 Y_RNA.563-201ENST00000384707 108 ntBASIC0.98□□□□□ -2.25
LRFN1Q9P244 MIR759-201ENST00000390224 91 ntBASIC0.98□□□□□ -2.25
LRFN1Q9P244 RNU6-1154P-201ENST00000391001 104 ntBASIC0.98□□□□□ -2.25
LRFN1Q9P244 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.98□□□□□ -2.25
LRFN1Q9P244 RNU6-1086P-201ENST00000410930 100 ntBASIC0.98□□□□□ -2.25
LRFN1Q9P244 RNU6-479P-201ENST00000516348 105 ntBASIC0.98□□□□□ -2.25
LRFN1Q9P244 RNU7-6P-201ENST00000516845 62 ntBASIC0.98□□□□□ -2.25
LRFN1Q9P244 RNA5SP205-201ENST00000364653 136 ntBASIC0.97□□□□□ -2.25
LRFN1Q9P244 RNY1P13-201ENST00000365030 105 ntBASIC0.97□□□□□ -2.25
LRFN1Q9P244 RNU6-1335P-201ENST00000365426 107 ntBASIC0.97□□□□□ -2.25
LRFN1Q9P244 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
LRFN1Q9P244 SNORD83.1-201ENST00000411362 77 ntBASIC0.97□□□□□ -2.25
LRFN1Q9P244 AL353765.1-201ENST00000605514 183 ntBASIC0.97□□□□□ -2.25
LRFN1Q9P244 AC087741.2-201ENST00000619415 172 ntBASIC0.97□□□□□ -2.25
LRFN1Q9P244 U6.95-201ENST00000636931 70 ntBASIC0.97□□□□□ -2.25
LRFN1Q9P244 Y_RNA.353-201ENST00000365440 108 ntBASIC0.96□□□□□ -2.26
LRFN1Q9P244 MT-TF-201ENST00000387314 71 ntBASIC0.96□□□□□ -2.26
LRFN1Q9P244 SNORD33.1-201ENST00000516213 88 ntBASIC0.96□□□□□ -2.26
LRFN1Q9P244 RNU6-313P-201ENST00000516317 112 ntBASIC0.96□□□□□ -2.26
LRFN1Q9P244 MIR4771-2-201ENST00000577758 74 ntBASIC0.96□□□□□ -2.26
LRFN1Q9P244 MIR3163-201ENST00000581592 73 ntBASIC0.96□□□□□ -2.26
LRFN1Q9P244 MIR4771-1-201ENST00000582617 74 ntBASIC0.96□□□□□ -2.26
LRFN1Q9P244 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
LRFN1Q9P244 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.96□□□□□ -2.26
LRFN1Q9P244 RNU2-51P-201ENST00000410708 197 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 AC015818.7-201ENST00000428754 109 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 AC087499.7-201ENST00000441958 109 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 RPL39P25-201ENST00000449384 154 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 Y_RNA.649-201ENST00000459077 103 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 RNA5SP436-201ENST00000516020 115 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 RNU6-977P-201ENST00000516411 103 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 AL359881.1-201ENST00000602916 267 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 AL589743.1-201ENST00000551932 2712 ntBASIC0.95□□□□□ -2.26
LRFN1Q9P244 RNY4P6-201ENST00000363667 96 ntBASIC0.94□□□□□ -2.26
LRFN1Q9P244 RNU6-949P-201ENST00000384040 107 ntBASIC0.94□□□□□ -2.26
LRFN1Q9P244 SNORD105-201ENST00000386910 85 ntBASIC0.94□□□□□ -2.26
LRFN1Q9P244 U8.15-201ENST00000390947 134 ntBASIC0.94□□□□□ -2.26
LRFN1Q9P244 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
LRFN1Q9P244 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.94□□□□□ -2.26
LRFN1Q9P244 Y_RNA.205-201ENST00000364128 113 ntBASIC0.93□□□□□ -2.26
LRFN1Q9P244 RNU6-616P-201ENST00000384353 107 ntBASIC0.93□□□□□ -2.26
LRFN1Q9P244 MIR548D2-201ENST00000384955 97 ntBASIC0.93□□□□□ -2.26
LRFN1Q9P244 MIR548A3-201ENST00000385297 97 ntBASIC0.93□□□□□ -2.26
LRFN1Q9P244 SNORD77B-201ENST00000391112 67 ntBASIC0.93□□□□□ -2.26
LRFN1Q9P244 MIR548I2-201ENST00000408348 149 ntBASIC0.93□□□□□ -2.26
LRFN1Q9P244 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.93□□□□□ -2.26
LRFN1Q9P244 SNORD67.1-201ENST00000516618 108 ntBASIC0.93□□□□□ -2.26
LRFN1Q9P244 FAM71BP1-201ENST00000604431 523 ntBASIC0.93□□□□□ -2.26
LRFN1Q9P244 AC020891.4-201ENST00000605745 93 ntBASIC0.93□□□□□ -2.26
LRFN1Q9P244 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.93□□□□□ -2.26
LRFN1Q9P244 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
LRFN1Q9P244 AC023934.1-201ENST00000574529 2389 ntBASIC0.92□□□□□ -2.26
LRFN1Q9P244 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms