Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 AL359881.1-201ENST00000602916 267 ntBASIC-0.53□□□□□ -2.49
CCDC59Q9P031 RNU7-10P-201ENST00000607194 63 ntBASIC-0.53□□□□□ -2.49
CCDC59Q9P031 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.53□□□□□ -2.49
CCDC59Q9P031 SNORD115-2-201ENST00000362842 82 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 SNORD114-10-201ENST00000363409 72 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 RNU6-103P-201ENST00000363686 107 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 SNORD115-20-201ENST00000365099 82 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 RNU6-429P-201ENST00000384582 108 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 HMGN2P22-201ENST00000427588 175 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 TRBVB-201ENST00000477100 408 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 MIR8064-201ENST00000612863 90 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.54□□□□□ -2.5
CCDC59Q9P031 U2.14-201ENST00000615943 113 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 AC105081.1-201ENST00000617727 106 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 AC084368.1-201ENST00000620935 65 ntBASIC-0.54□□□□□ -2.5
CCDC59Q9P031 MIR148A-201ENST00000362215 68 ntBASIC-0.55□□□□□ -2.5
CCDC59Q9P031 SNORD114-31-201ENST00000363219 75 ntBASIC-0.55□□□□□ -2.5
CCDC59Q9P031 SNORD114-28-201ENST00000363610 72 ntBASIC-0.55□□□□□ -2.5
CCDC59Q9P031 RNU6-923P-201ENST00000364753 107 ntBASIC-0.55□□□□□ -2.5
CCDC59Q9P031 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.55□□□□□ -2.5
CCDC59Q9P031 NAMPTP3-201ENST00000569273 224 ntBASIC-0.55□□□□□ -2.5
CCDC59Q9P031 MIR3666-201ENST00000607845 111 ntBASIC-0.55□□□□□ -2.5
CCDC59Q9P031 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 SNORD49B-201ENST00000365172 72 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 RNU6-449P-201ENST00000383914 107 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 MIR635-201ENST00000384830 98 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 MIR489-201ENST00000384923 84 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 MIR329-2-201ENST00000385029 84 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 MIR599-201ENST00000385069 95 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 MIR876-201ENST00000401147 81 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 MIR548AE2-201ENST00000583456 67 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 MIR4282-201ENST00000583613 67 ntBASIC-0.56□□□□□ -2.5
CCDC59Q9P031 RNU6-509P-201ENST00000363519 107 ntBASIC-0.57□□□□□ -2.5
CCDC59Q9P031 BX276092.1-201ENST00000427368 251 ntBASIC-0.57□□□□□ -2.5
CCDC59Q9P031 RNA5SP484-201ENST00000458857 111 ntBASIC-0.57□□□□□ -2.5
CCDC59Q9P031 MIR4744-201ENST00000581563 82 ntBASIC-0.57□□□□□ -2.5
CCDC59Q9P031 AL109933.3-201ENST00000619095 188 ntBASIC-0.57□□□□□ -2.5
CCDC59Q9P031 MTND4P29-201ENST00000503122 1372 ntBASIC-0.57□□□□□ -2.5
CCDC59Q9P031 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.58□□□□□ -2.5
CCDC59Q9P031 RNA5SP300-201ENST00000391197 107 ntBASIC-0.58□□□□□ -2.5
CCDC59Q9P031 AC022028.1-201ENST00000412054 408 ntBASIC-0.58□□□□□ -2.5
CCDC59Q9P031 AC109327.2-201ENST00000448339 378 ntBASIC-0.58□□□□□ -2.5
CCDC59Q9P031 TRAJ51-201ENST00000504127 63 ntBASIC-0.58□□□□□ -2.5
CCDC59Q9P031 MIR4680-201ENST00000580906 66 ntBASIC-0.58□□□□□ -2.5
CCDC59Q9P031 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.58□□□□□ -2.5
CCDC59Q9P031 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.58□□□□□ -2.5
CCDC59Q9P031 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.59□□□□□ -2.5
CCDC59Q9P031 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.59□□□□□ -2.5
CCDC59Q9P031 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.59□□□□□ -2.5
CCDC59Q9P031 AC097635.1-201ENST00000450678 155 ntBASIC-0.59□□□□□ -2.5
CCDC59Q9P031 SNORA25.13-201ENST00000516395 103 ntBASIC-0.59□□□□□ -2.5
CCDC59Q9P031 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.59□□□□□ -2.5
CCDC59Q9P031 RNU6-865P-201ENST00000364772 107 ntBASIC-0.6□□□□□ -2.51
CCDC59Q9P031 RNY3P14-201ENST00000384309 102 ntBASIC-0.6□□□□□ -2.51
CCDC59Q9P031 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.6□□□□□ -2.51
CCDC59Q9P031 MIR516B1-201ENST00000385211 90 ntBASIC-0.6□□□□□ -2.51
CCDC59Q9P031 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.6□□□□□ -2.51
CCDC59Q9P031 MIR4500-201ENST00000579472 76 ntBASIC-0.6□□□□□ -2.51
CCDC59Q9P031 MIR548AZ-201ENST00000616567 95 ntBASIC-0.6□□□□□ -2.51
CCDC59Q9P031 AL162726.3-218ENST00000636401 95 ntBASIC-0.6□□□□□ -2.51
CCDC59Q9P031 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.61□□□□□ -2.51
CCDC59Q9P031 RNU6-578P-201ENST00000390980 103 ntBASIC-0.61□□□□□ -2.51
CCDC59Q9P031 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
CCDC59Q9P031 AL160413.1-201ENST00000622780 310 ntBASIC-0.61□□□□□ -2.51
CCDC59Q9P031 SNORA25.7-201ENST00000364375 127 ntBASIC-0.62□□□□□ -2.51
CCDC59Q9P031 AC134503.1-201ENST00000633048 54 ntBASIC-0.62□□□□□ -2.51
CCDC59Q9P031 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 RNU6-690P-201ENST00000365242 106 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 MTND4LP11-201ENST00000422184 280 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 RNU2-35P-201ENST00000516446 142 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 MIR3920-201ENST00000581751 86 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 MIR4263-201ENST00000584745 83 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.63□□□□□ -2.51
CCDC59Q9P031 MIR4788-201ENST00000639104 80 ntBASIC-0.63□□□□□ -2.51
CCDC59Q9P031 MIR335-201ENST00000362173 94 ntBASIC-0.64□□□□□ -2.51
CCDC59Q9P031 RNA5SP457-201ENST00000363657 124 ntBASIC-0.64□□□□□ -2.51
CCDC59Q9P031 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.64□□□□□ -2.51
CCDC59Q9P031 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.64□□□□□ -2.51
CCDC59Q9P031 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.64□□□□□ -2.51
CCDC59Q9P031 RNU6-643P-201ENST00000384018 107 ntBASIC-0.64□□□□□ -2.51
CCDC59Q9P031 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.64□□□□□ -2.51
CCDC59Q9P031 SNORA32.3-201ENST00000384772 121 ntBASIC-0.64□□□□□ -2.51
CCDC59Q9P031 MIR548P-201ENST00000408336 84 ntBASIC-0.64□□□□□ -2.51
CCDC59Q9P031 MIR1270-201ENST00000459320 83 ntBASIC-0.64□□□□□ -2.51
CCDC59Q9P031 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.65□□□□□ -2.51
CCDC59Q9P031 SNORD14C-201ENST00000365382 88 ntBASIC-0.65□□□□□ -2.51
CCDC59Q9P031 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.65□□□□□ -2.51
CCDC59Q9P031 AC244250.2-201ENST00000418731 148 ntBASIC-0.65□□□□□ -2.51
CCDC59Q9P031 RNU7-13P-201ENST00000516413 62 ntBASIC-0.65□□□□□ -2.51
CCDC59Q9P031 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.65□□□□□ -2.51
CCDC59Q9P031 MIR4801-201ENST00000582704 82 ntBASIC-0.65□□□□□ -2.51
CCDC59Q9P031 uc_338.36-201ENST00000622331 158 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms