Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RPL39P25-201ENST00000449384 154 ntBASIC1.25□□□□□ -2.21
NCKIPSDQ9NZQ3 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
NCKIPSDQ9NZQ3 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
NCKIPSDQ9NZQ3 Y_RNA.694-201ENST00000516677 117 ntBASIC1.25□□□□□ -2.21
NCKIPSDQ9NZQ3 RNU6-363P-201ENST00000362895 105 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 RNU6-654P-201ENST00000364373 107 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 Y_RNA.544-201ENST00000384650 113 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 SNORD38B-201ENST00000384690 67 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 RNU6-816P-201ENST00000390914 107 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 AC244023.1-201ENST00000426884 112 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 MIR1270-201ENST00000459320 83 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 MIR548AE2-201ENST00000583456 67 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 AC242498.1-201ENST00000604134 111 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 SNORD38B-202ENST00000625943 69 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 MIR6516-201ENST00000630554 81 ntBASIC1.24□□□□□ -2.21
NCKIPSDQ9NZQ3 MIR103A2-201ENST00000362154 78 ntBASIC1.23□□□□□ -2.21
NCKIPSDQ9NZQ3 RNU6-53P-201ENST00000365367 106 ntBASIC1.23□□□□□ -2.21
NCKIPSDQ9NZQ3 SNORA25-201ENST00000384384 134 ntBASIC1.23□□□□□ -2.21
NCKIPSDQ9NZQ3 RNU7-40P-201ENST00000516397 64 ntBASIC1.23□□□□□ -2.21
NCKIPSDQ9NZQ3 FAM71BP1-201ENST00000604431 523 ntBASIC1.23□□□□□ -2.21
NCKIPSDQ9NZQ3 MIR7111-201ENST00000619751 72 ntBASIC1.23□□□□□ -2.21
NCKIPSDQ9NZQ3 Y_RNA.10-201ENST00000362371 110 ntBASIC1.22□□□□□ -2.21
NCKIPSDQ9NZQ3 RNU6-1298P-201ENST00000362456 101 ntBASIC1.22□□□□□ -2.21
NCKIPSDQ9NZQ3 RNU4-67P-201ENST00000364569 141 ntBASIC1.22□□□□□ -2.21
NCKIPSDQ9NZQ3 RNU6-409P-201ENST00000384114 104 ntBASIC1.22□□□□□ -2.21
NCKIPSDQ9NZQ3 SNORA75.2-201ENST00000391138 150 ntBASIC1.22□□□□□ -2.21
NCKIPSDQ9NZQ3 SNORA75.3-201ENST00000391231 150 ntBASIC1.22□□□□□ -2.21
NCKIPSDQ9NZQ3 RNA5SP95-201ENST00000410319 137 ntBASIC1.22□□□□□ -2.21
NCKIPSDQ9NZQ3 Y_RNA.677-201ENST00000516401 85 ntBASIC1.22□□□□□ -2.21
NCKIPSDQ9NZQ3 Y_RNA.818-201ENST00000618813 71 ntBASIC1.22□□□□□ -2.21
NCKIPSDQ9NZQ3 Y_RNA.43-201ENST00000362670 111 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 Y_RNA.155-201ENST00000363632 101 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU4-36P-201ENST00000364294 144 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-733P-201ENST00000410759 104 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-1018P-201ENST00000516577 106 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 RNA5SP170-201ENST00000517150 101 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU7-35P-201ENST00000517174 62 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-537P-201ENST00000517277 103 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 AL078603.1-201ENST00000603824 313 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 uc_338.6-201ENST00000613544 171 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 AP001318.4-201ENST00000616637 121 ntBASIC1.21□□□□□ -2.22
NCKIPSDQ9NZQ3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 RNY3P2-201ENST00000362918 102 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-396P-201ENST00000365369 105 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-42P-201ENST00000384165 107 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 SNORA18-201ENST00000384416 132 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-342P-201ENST00000384521 104 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-904P-201ENST00000516206 101 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 RNA5SP220-201ENST00000516298 104 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU11-2P-201ENST00000516898 142 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-158P-201ENST00000517104 100 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 MIR4694-201ENST00000578534 80 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 MIR2052-201ENST00000636055 55 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 MIR1255B1-201ENST00000636325 63 ntBASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-616P-201ENST00000384353 107 ntBASIC1.19□□□□□ -2.22
NCKIPSDQ9NZQ3 SNORA80D-201ENST00000384488 135 ntBASIC1.19□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-613P-201ENST00000410412 108 ntBASIC1.19□□□□□ -2.22
NCKIPSDQ9NZQ3 SNORA40.13-201ENST00000516379 120 ntBASIC1.19□□□□□ -2.22
NCKIPSDQ9NZQ3 DEFB131E-201ENST00000532329 154 ntBASIC1.19□□□□□ -2.22
NCKIPSDQ9NZQ3 MIR6740-201ENST00000618268 113 ntBASIC1.19□□□□□ -2.22
NCKIPSDQ9NZQ3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-1099P-201ENST00000363533 107 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 Y_RNA.348-201ENST00000365403 103 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 SNORA32-201ENST00000384072 121 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 MIR590-201ENST00000385008 97 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 MT-TN-201ENST00000387400 73 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-205P-201ENST00000390858 107 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 Y_RNA.601-201ENST00000410500 113 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 SNORD79.1-201ENST00000516069 84 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU7-79P-201ENST00000516082 62 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 MIR2115-201ENST00000516657 100 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 AC141557.1-201ENST00000540982 400 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 SNORA4-201ENST00000584302 138 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
NCKIPSDQ9NZQ3 Y_RNA.93-201ENST00000363066 109 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 SNORD114-10-201ENST00000363409 72 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 SNORD115-35-201ENST00000365122 82 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-447P-201ENST00000410293 104 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-355P-201ENST00000410427 104 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-791P-201ENST00000410467 104 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-705P-201ENST00000410601 104 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.17□□□□□ -2.22
NCKIPSDQ9NZQ3 RNU6-860P-201ENST00000410860 104 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms