Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNU7-56P-201ENST00000458744 62 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 RNU6-62P-201ENST00000516526 102 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 RNU7-156P-201ENST00000517214 74 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 AC025627.3-201ENST00000582078 182 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.12□□□□□ -2.23
MKS1Q9NXB0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
MKS1Q9NXB0 RNA5SP432-201ENST00000362480 116 ntBASIC1.11□□□□□ -2.23
MKS1Q9NXB0 RNU6-1335P-201ENST00000365426 107 ntBASIC1.11□□□□□ -2.23
MKS1Q9NXB0 RNU6-22P-201ENST00000384355 107 ntBASIC1.11□□□□□ -2.23
MKS1Q9NXB0 MIR548D2-201ENST00000384955 97 ntBASIC1.11□□□□□ -2.23
MKS1Q9NXB0 Y_RNA.588-201ENST00000391254 102 ntBASIC1.11□□□□□ -2.23
MKS1Q9NXB0 RNU4-83P-201ENST00000410863 133 ntBASIC1.11□□□□□ -2.23
MKS1Q9NXB0 MIR4491-201ENST00000581087 68 ntBASIC1.11□□□□□ -2.23
MKS1Q9NXB0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.11□□□□□ -2.23
MKS1Q9NXB0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
MKS1Q9NXB0 RNU6-364P-201ENST00000384387 107 ntBASIC1.1□□□□□ -2.23
MKS1Q9NXB0 Y_RNA.563-201ENST00000384707 108 ntBASIC1.1□□□□□ -2.23
MKS1Q9NXB0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
MKS1Q9NXB0 SNORD92-201ENST00000585078 85 ntBASIC1.1□□□□□ -2.23
MKS1Q9NXB0 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
MKS1Q9NXB0 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
MKS1Q9NXB0 snoU13.31-201ENST00000607291 104 ntBASIC1.1□□□□□ -2.23
MKS1Q9NXB0 AL157834.3-201ENST00000615543 103 ntBASIC1.1□□□□□ -2.23
MKS1Q9NXB0 AC105081.1-201ENST00000617727 106 ntBASIC1.1□□□□□ -2.23
MKS1Q9NXB0 MIR206-201ENST00000384872 86 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU1-119P-201ENST00000391122 165 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-447P-201ENST00000410293 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-1118P-201ENST00000410382 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-1076P-201ENST00000410397 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-355P-201ENST00000410427 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-791P-201ENST00000410467 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-705P-201ENST00000410601 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-1100P-201ENST00000410691 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-860P-201ENST00000410860 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-1217P-201ENST00000411276 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-785P-201ENST00000411324 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 AL603825.1-201ENST00000438481 80 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 SNORD33.1-201ENST00000516213 88 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 AC133485.1-201ENST00000567176 124 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 Y_RNA.773-201ENST00000607168 90 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 U6.90-201ENST00000614007 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 AL353770.2-201ENST00000620024 78 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 U6.70-201ENST00000620287 104 ntBASIC1.09□□□□□ -2.23
MKS1Q9NXB0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.09□□□□□ -2.23
MKS1Q9NXB0 RNU6-403P-201ENST00000363163 104 ntBASIC1.08□□□□□ -2.24
MKS1Q9NXB0 MIR520H-201ENST00000385126 88 ntBASIC1.08□□□□□ -2.24
MKS1Q9NXB0 RNU6-1168P-201ENST00000390831 104 ntBASIC1.08□□□□□ -2.24
MKS1Q9NXB0 AL606753.1-201ENST00000427435 87 ntBASIC1.08□□□□□ -2.24
MKS1Q9NXB0 RNU7-102P-201ENST00000458948 62 ntBASIC1.08□□□□□ -2.24
MKS1Q9NXB0 Y_RNA.649-201ENST00000459077 103 ntBASIC1.08□□□□□ -2.24
MKS1Q9NXB0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.08□□□□□ -2.24
MKS1Q9NXB0 RNU7-2P-201ENST00000516096 62 ntBASIC1.08□□□□□ -2.24
MKS1Q9NXB0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.08□□□□□ -2.24
MKS1Q9NXB0 MIR8066-201ENST00000617280 78 ntBASIC1.08□□□□□ -2.24
MKS1Q9NXB0 Y_RNA.353-201ENST00000365440 108 ntBASIC1.07□□□□□ -2.24
MKS1Q9NXB0 RNU6-1321P-201ENST00000390905 107 ntBASIC1.07□□□□□ -2.24
MKS1Q9NXB0 RPL39P28-201ENST00000465655 155 ntBASIC1.07□□□□□ -2.24
MKS1Q9NXB0 RNU6-479P-201ENST00000516348 105 ntBASIC1.07□□□□□ -2.24
MKS1Q9NXB0 Y_RNA.42-201ENST00000362660 108 ntBASIC1.06□□□□□ -2.24
MKS1Q9NXB0 SNORD115-35-201ENST00000365122 82 ntBASIC1.06□□□□□ -2.24
MKS1Q9NXB0 Y_RNA.344-201ENST00000365381 112 ntBASIC1.06□□□□□ -2.24
MKS1Q9NXB0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.06□□□□□ -2.24
MKS1Q9NXB0 MIR548A3-201ENST00000385297 97 ntBASIC1.06□□□□□ -2.24
MKS1Q9NXB0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
MKS1Q9NXB0 AC008608.1-201ENST00000603910 127 ntBASIC1.06□□□□□ -2.24
MKS1Q9NXB0 AL670379.3-201ENST00000605040 251 ntBASIC1.06□□□□□ -2.24
MKS1Q9NXB0 MIR6082-201ENST00000613604 109 ntBASIC1.06□□□□□ -2.24
MKS1Q9NXB0 MIR1255B1-201ENST00000636325 63 ntBASIC1.06□□□□□ -2.24
MKS1Q9NXB0 Y_RNA.13-201ENST00000362403 112 ntBASIC1.05□□□□□ -2.24
MKS1Q9NXB0 SNORA72.6-201ENST00000384520 129 ntBASIC1.05□□□□□ -2.24
MKS1Q9NXB0 RNU6-1154P-201ENST00000391001 104 ntBASIC1.05□□□□□ -2.24
MKS1Q9NXB0 SNORD99-201ENST00000408612 74 ntBASIC1.05□□□□□ -2.24
MKS1Q9NXB0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
MKS1Q9NXB0 AC108729.3-201ENST00000513484 108 ntBASIC1.05□□□□□ -2.24
MKS1Q9NXB0 AC138749.4-201ENST00000563970 127 ntBASIC1.05□□□□□ -2.24
MKS1Q9NXB0 MIR4498-201ENST00000577599 66 ntBASIC1.05□□□□□ -2.24
MKS1Q9NXB0 U6.109-201ENST00000636749 87 ntBASIC1.05□□□□□ -2.24
MKS1Q9NXB0 RNA5SP133-201ENST00000363368 119 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 RNA5SP205-201ENST00000364653 136 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 Y_RNA.362-201ENST00000365518 110 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 SNORA19-201ENST00000384737 128 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 RNU6-1307P-201ENST00000391012 103 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 RNU7-48P-201ENST00000458875 63 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 RNU6-313P-201ENST00000516317 112 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 SNORA25.16-201ENST00000516741 121 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 RNU6-765P-201ENST00000516916 99 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 AC007012.1-201ENST00000567192 175 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 MIR4679-2-201ENST00000578358 77 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 AL353765.1-201ENST00000605514 183 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 AL359821.1-201ENST00000605519 182 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
MKS1Q9NXB0 Y_RNA.98-201ENST00000363109 102 ntBASIC1.03□□□□□ -2.24
MKS1Q9NXB0 RNY1P2-201ENST00000364820 117 ntBASIC1.03□□□□□ -2.24
MKS1Q9NXB0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
MKS1Q9NXB0 MIR548A1-201ENST00000385041 97 ntBASIC1.03□□□□□ -2.24
MKS1Q9NXB0 RNU6-521P-201ENST00000516663 105 ntBASIC1.03□□□□□ -2.24
MKS1Q9NXB0 AC090897.1-201ENST00000580909 226 ntBASIC1.03□□□□□ -2.24
MKS1Q9NXB0 Y_RNA.328-201ENST00000365208 113 ntBASIC1.02□□□□□ -2.25
MKS1Q9NXB0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.02□□□□□ -2.25
MKS1Q9NXB0 RNU6-53P-201ENST00000365367 106 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms