Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNA5SP222-201ENST00000411039 105 ntBASIC0.69□□□□□ -2.3
SLC6A13Q9NSD5 AL512326.2-201ENST00000426359 151 ntBASIC0.69□□□□□ -2.3
SLC6A13Q9NSD5 RNU7-164P-201ENST00000459221 62 ntBASIC0.69□□□□□ -2.3
SLC6A13Q9NSD5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
SLC6A13Q9NSD5 AC008608.1-201ENST00000603910 127 ntBASIC0.69□□□□□ -2.3
SLC6A13Q9NSD5 Y_RNA.400-201ENST00000383963 111 ntBASIC0.68□□□□□ -2.3
SLC6A13Q9NSD5 MIR7-2-201ENST00000384970 110 ntBASIC0.68□□□□□ -2.3
SLC6A13Q9NSD5 RNU6-460P-201ENST00000391158 108 ntBASIC0.68□□□□□ -2.3
SLC6A13Q9NSD5 AC096949.1-201ENST00000412047 152 ntBASIC0.68□□□□□ -2.3
SLC6A13Q9NSD5 RNU7-79P-201ENST00000516082 62 ntBASIC0.68□□□□□ -2.3
SLC6A13Q9NSD5 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.68□□□□□ -2.3
SLC6A13Q9NSD5 MIR3612-201ENST00000579753 87 ntBASIC0.68□□□□□ -2.3
SLC6A13Q9NSD5 MIR548X2-201ENST00000579776 100 ntBASIC0.68□□□□□ -2.3
SLC6A13Q9NSD5 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 Y_RNA.42-201ENST00000362660 108 ntBASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 Y_RNA.180-201ENST00000363867 113 ntBASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 RNU6-915P-201ENST00000364943 103 ntBASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 Y_RNA.366-201ENST00000365540 102 ntBASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 SNORD100-201ENST00000408573 76 ntBASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 RNU7-123P-201ENST00000515911 60 ntBASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 SNORA25.12-201ENST00000516202 82 ntBASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 MIR548AE2-201ENST00000583456 67 ntBASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 MIR8066-201ENST00000617280 78 ntBASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SLC6A13Q9NSD5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 RNU6-403P-201ENST00000363163 104 ntBASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 Y_RNA.298-201ENST00000364960 107 ntBASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 SNORA32-201ENST00000384072 121 ntBASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 Y_RNA.588-201ENST00000391254 102 ntBASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 RNU6-448P-201ENST00000517052 107 ntBASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 AP003327.1-201ENST00000529684 127 ntBASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 MIR4491-201ENST00000581087 68 ntBASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 MIR3668-201ENST00000582138 75 ntBASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
SLC6A13Q9NSD5 MIR18A-201ENST00000362310 71 ntBASIC0.65□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.215-201ENST00000364204 112 ntBASIC0.65□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.464-201ENST00000384282 110 ntBASIC0.65□□□□□ -2.31
SLC6A13Q9NSD5 AC004941.2-201ENST00000427009 228 ntBASIC0.65□□□□□ -2.31
SLC6A13Q9NSD5 RNU5E-3P-201ENST00000515913 68 ntBASIC0.65□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.692-201ENST00000516627 105 ntBASIC0.65□□□□□ -2.31
SLC6A13Q9NSD5 RNU6-765P-201ENST00000516916 99 ntBASIC0.65□□□□□ -2.31
SLC6A13Q9NSD5 AL137067.1-201ENST00000615933 120 ntBASIC0.65□□□□□ -2.31
SLC6A13Q9NSD5 AP001340.1-201ENST00000624405 217 ntBASIC0.65□□□□□ -2.31
SLC6A13Q9NSD5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
SLC6A13Q9NSD5 AL589743.1-201ENST00000551932 2712 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.13-201ENST00000362403 112 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 SNORD114-26-201ENST00000363543 72 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.299-201ENST00000364973 94 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 RNU6-1212P-201ENST00000517023 104 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 MTND5P41-201ENST00000517498 206 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 AP001328.1-201ENST00000528550 176 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 MIR3121-201ENST00000579680 77 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 AC108081.1-201ENST00000604358 221 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 MIR6082-201ENST00000613604 109 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 AC021753.1-201ENST00000635724 168 ntBASIC0.64□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.36-201ENST00000362602 112 ntBASIC0.63□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.420-201ENST00000384043 110 ntBASIC0.63□□□□□ -2.31
SLC6A13Q9NSD5 RNY4P20-201ENST00000516678 93 ntBASIC0.63□□□□□ -2.31
SLC6A13Q9NSD5 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
SLC6A13Q9NSD5 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
SLC6A13Q9NSD5 SNORA72.6-201ENST00000384520 129 ntBASIC0.62□□□□□ -2.31
SLC6A13Q9NSD5 MIR569-201ENST00000385228 96 ntBASIC0.62□□□□□ -2.31
SLC6A13Q9NSD5 MIR140-201ENST00000385282 100 ntBASIC0.62□□□□□ -2.31
SLC6A13Q9NSD5 RNU4-69P-201ENST00000410677 143 ntBASIC0.62□□□□□ -2.31
SLC6A13Q9NSD5 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
SLC6A13Q9NSD5 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.170-201ENST00000363746 110 ntBASIC0.61□□□□□ -2.31
SLC6A13Q9NSD5 RNA5SP117-201ENST00000365294 118 ntBASIC0.61□□□□□ -2.31
SLC6A13Q9NSD5 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
SLC6A13Q9NSD5 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
SLC6A13Q9NSD5 SNORD67.1-201ENST00000516618 108 ntBASIC0.61□□□□□ -2.31
SLC6A13Q9NSD5 RNU7-137P-201ENST00000516788 62 ntBASIC0.61□□□□□ -2.31
SLC6A13Q9NSD5 SNORD114-10-201ENST00000363409 72 ntBASIC0.6□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.488-201ENST00000384403 102 ntBASIC0.6□□□□□ -2.31
SLC6A13Q9NSD5 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
SLC6A13Q9NSD5 MIR1270-201ENST00000459320 83 ntBASIC0.6□□□□□ -2.31
SLC6A13Q9NSD5 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
SLC6A13Q9NSD5 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
SLC6A13Q9NSD5 MIR216A-201ENST00000385063 110 ntBASIC0.59□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.617-201ENST00000410920 90 ntBASIC0.59□□□□□ -2.31
SLC6A13Q9NSD5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.59□□□□□ -2.31
SLC6A13Q9NSD5 RNU7-200P-201ENST00000516105 62 ntBASIC0.59□□□□□ -2.31
SLC6A13Q9NSD5 RNU6-1194P-201ENST00000516208 104 ntBASIC0.59□□□□□ -2.31
SLC6A13Q9NSD5 AL359881.1-201ENST00000602916 267 ntBASIC0.59□□□□□ -2.31
SLC6A13Q9NSD5 U7.2-201ENST00000607576 63 ntBASIC0.59□□□□□ -2.31
SLC6A13Q9NSD5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.59□□□□□ -2.31
SLC6A13Q9NSD5 MIR6779-201ENST00000617283 64 ntBASIC0.59□□□□□ -2.31
SLC6A13Q9NSD5 Y_RNA.114-201ENST00000363265 113 ntBASIC0.58□□□□□ -2.32
SLC6A13Q9NSD5 RNU6-647P-201ENST00000364243 107 ntBASIC0.58□□□□□ -2.32
SLC6A13Q9NSD5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SLC6A13Q9NSD5 SNORD77B-201ENST00000391112 67 ntBASIC0.58□□□□□ -2.32
SLC6A13Q9NSD5 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
SLC6A13Q9NSD5 SNORA25.16-201ENST00000516741 121 ntBASIC0.58□□□□□ -2.32
SLC6A13Q9NSD5 AC022523.2-201ENST00000561045 150 ntBASIC0.58□□□□□ -2.32
SLC6A13Q9NSD5 RN7SL793P-201ENST00000583259 296 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms