Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RPS29P23-201ENST00000458635 123 ntBASIC2.64□□□□□ -1.99
RTN4Q9NQC3 RPL23AP94-201ENST00000512518 302 ntBASIC2.64□□□□□ -1.99
RTN4Q9NQC3 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
RTN4Q9NQC3 Y_RNA.588-201ENST00000391254 102 ntBASIC2.63□□□□□ -1.99
RTN4Q9NQC3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.63□□□□□ -1.99
RTN4Q9NQC3 RNY4P30-201ENST00000410216 95 ntBASIC2.63□□□□□ -1.99
RTN4Q9NQC3 RNU6-887P-201ENST00000410660 100 ntBASIC2.63□□□□□ -1.99
RTN4Q9NQC3 AC109327.2-201ENST00000448339 378 ntBASIC2.63□□□□□ -1.99
RTN4Q9NQC3 MIR4777-201ENST00000583710 86 ntBASIC2.63□□□□□ -1.99
RTN4Q9NQC3 U4.3-201ENST00000621047 82 ntBASIC2.63□□□□□ -1.99
RTN4Q9NQC3 Y_RNA.247-201ENST00000364500 92 ntBASIC2.62□□□□□ -1.99
RTN4Q9NQC3 FABP5P4-201ENST00000437203 171 ntBASIC2.62□□□□□ -1.99
RTN4Q9NQC3 AC002429.1-201ENST00000437672 148 ntBASIC2.62□□□□□ -1.99
RTN4Q9NQC3 AL033523.1-201ENST00000605153 153 ntBASIC2.62□□□□□ -1.99
RTN4Q9NQC3 RNU6-1298P-201ENST00000362456 101 ntBASIC2.61□□□□□ -1.99
RTN4Q9NQC3 Y_RNA.173-201ENST00000363776 113 ntBASIC2.61□□□□□ -1.99
RTN4Q9NQC3 RNU6-364P-201ENST00000384387 107 ntBASIC2.61□□□□□ -1.99
RTN4Q9NQC3 MIR938-201ENST00000401216 83 ntBASIC2.61□□□□□ -1.99
RTN4Q9NQC3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.61□□□□□ -1.99
RTN4Q9NQC3 MIR4513-201ENST00000581077 86 ntBASIC2.61□□□□□ -1.99
RTN4Q9NQC3 AC012493.3-201ENST00000604494 112 ntBASIC2.61□□□□□ -1.99
RTN4Q9NQC3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
RTN4Q9NQC3 RNA5SP327-201ENST00000362494 101 ntBASIC2.6□□□□□ -1.99
RTN4Q9NQC3 Y_RNA.369-201ENST00000365568 117 ntBASIC2.6□□□□□ -1.99
RTN4Q9NQC3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.6□□□□□ -1.99
RTN4Q9NQC3 MIR196B-201ENST00000384852 84 ntBASIC2.6□□□□□ -1.99
RTN4Q9NQC3 SNRPGP12-201ENST00000449481 213 ntBASIC2.6□□□□□ -1.99
RTN4Q9NQC3 snoU13.21-201ENST00000459368 105 ntBASIC2.6□□□□□ -1.99
RTN4Q9NQC3 RNU7-40P-201ENST00000516397 64 ntBASIC2.6□□□□□ -1.99
RTN4Q9NQC3 MIR6082-201ENST00000613604 109 ntBASIC2.6□□□□□ -1.99
RTN4Q9NQC3 MIR101-2-201ENST00000362195 79 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 RNU6-1163P-201ENST00000364516 107 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 SNORA25.8-201ENST00000364831 128 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 MIR200A-201ENST00000384875 90 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 MIR100-201ENST00000385259 80 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 RNA5SP184-201ENST00000411071 108 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 RNU6-977P-201ENST00000516411 103 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 MIR4676-201ENST00000583078 72 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 AC027335.2-201ENST00000624030 375 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 MIR1291-201ENST00000627649 87 ntBASIC2.59□□□□□ -1.99
RTN4Q9NQC3 MIR19B1-201ENST00000384829 87 ntBASIC2.58□□□□□ -2
RTN4Q9NQC3 MIR4781-201ENST00000585250 76 ntBASIC2.58□□□□□ -2
RTN4Q9NQC3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.58□□□□□ -2
RTN4Q9NQC3 MALAT1.1-201ENST00000618249 95 ntBASIC2.58□□□□□ -2
RTN4Q9NQC3 RNU7-61P-201ENST00000515897 61 ntBASIC2.57□□□□□ -2
RTN4Q9NQC3 RNU7-156P-201ENST00000517214 74 ntBASIC2.57□□□□□ -2
RTN4Q9NQC3 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
RTN4Q9NQC3 MIR4298-201ENST00000584380 73 ntBASIC2.57□□□□□ -2
RTN4Q9NQC3 AC091304.10-201ENST00000641554 121 ntBASIC2.57□□□□□ -2
RTN4Q9NQC3 SNORD116-10-201ENST00000363791 102 ntBASIC2.56□□□□□ -2
RTN4Q9NQC3 SNORD114-30-201ENST00000364448 72 ntBASIC2.56□□□□□ -2
RTN4Q9NQC3 RNU6-644P-201ENST00000391155 98 ntBASIC2.56□□□□□ -2
RTN4Q9NQC3 MIR548H5-201ENST00000580314 60 ntBASIC2.56□□□□□ -2
RTN4Q9NQC3 AC062016.1-201ENST00000355719 319 ntBASIC2.55□□□□□ -2
RTN4Q9NQC3 RNU6-1244P-201ENST00000363614 108 ntBASIC2.55□□□□□ -2
RTN4Q9NQC3 RNU6-531P-201ENST00000516694 104 ntBASIC2.55□□□□□ -2
RTN4Q9NQC3 SNORD92-201ENST00000585078 85 ntBASIC2.55□□□□□ -2
RTN4Q9NQC3 AC006254.2-201ENST00000603259 279 ntBASIC2.55□□□□□ -2
RTN4Q9NQC3 RNU6-86P-201ENST00000606534 107 ntBASIC2.55□□□□□ -2
RTN4Q9NQC3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.54□□□□□ -2
RTN4Q9NQC3 SNORA25.16-201ENST00000516741 121 ntBASIC2.54□□□□□ -2
RTN4Q9NQC3 MIR8066-201ENST00000617280 78 ntBASIC2.54□□□□□ -2
RTN4Q9NQC3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
RTN4Q9NQC3 RNU6-1255P-201ENST00000363434 112 ntBASIC2.53□□□□□ -2
RTN4Q9NQC3 RNA5SP68-201ENST00000363885 119 ntBASIC2.53□□□□□ -2
RTN4Q9NQC3 Y_RNA.467-201ENST00000384297 102 ntBASIC2.53□□□□□ -2
RTN4Q9NQC3 MIR1827-201ENST00000408549 66 ntBASIC2.53□□□□□ -2
RTN4Q9NQC3 AP003327.1-201ENST00000529684 127 ntBASIC2.53□□□□□ -2
RTN4Q9NQC3 MIR5582-201ENST00000579697 68 ntBASIC2.53□□□□□ -2
RTN4Q9NQC3 AL359821.1-201ENST00000605519 182 ntBASIC2.53□□□□□ -2
RTN4Q9NQC3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RTN4Q9NQC3 Y_RNA.342-201ENST00000365352 113 ntBASIC2.52□□□□□ -2.01
RTN4Q9NQC3 RNU1-119P-201ENST00000391122 165 ntBASIC2.52□□□□□ -2.01
RTN4Q9NQC3 RNA5SP148-201ENST00000516527 94 ntBASIC2.52□□□□□ -2.01
RTN4Q9NQC3 MIR5007-201ENST00000583098 95 ntBASIC2.52□□□□□ -2.01
RTN4Q9NQC3 MIR5002-201ENST00000584713 97 ntBASIC2.52□□□□□ -2.01
RTN4Q9NQC3 AC020891.4-201ENST00000605745 93 ntBASIC2.52□□□□□ -2.01
RTN4Q9NQC3 AC046143.2-201ENST00000609789 160 ntBASIC2.52□□□□□ -2.01
RTN4Q9NQC3 MIR6817-201ENST00000615588 66 ntBASIC2.52□□□□□ -2.01
RTN4Q9NQC3 MIR6766-201ENST00000622641 72 ntBASIC2.52□□□□□ -2.01
RTN4Q9NQC3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTN4Q9NQC3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTN4Q9NQC3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.51□□□□□ -2.01
RTN4Q9NQC3 Y_RNA.13-201ENST00000362403 112 ntBASIC2.51□□□□□ -2.01
RTN4Q9NQC3 RNU6-1110P-201ENST00000516462 101 ntBASIC2.51□□□□□ -2.01
RTN4Q9NQC3 RNU6-850P-201ENST00000516934 103 ntBASIC2.51□□□□□ -2.01
RTN4Q9NQC3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTN4Q9NQC3 AC019288.1-201ENST00000557918 224 ntBASIC2.5□□□□□ -2.01
RTN4Q9NQC3 MIR4804-201ENST00000581683 73 ntBASIC2.5□□□□□ -2.01
RTN4Q9NQC3 MIR3162-201ENST00000581818 82 ntBASIC2.5□□□□□ -2.01
RTN4Q9NQC3 U7.3-201ENST00000616123 62 ntBASIC2.5□□□□□ -2.01
RTN4Q9NQC3 Y_RNA.56-201ENST00000362798 112 ntBASIC2.49□□□□□ -2.01
RTN4Q9NQC3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RTN4Q9NQC3 Y_RNA.42-201ENST00000362660 108 ntBASIC2.48□□□□□ -2.01
RTN4Q9NQC3 Y_RNA.57-201ENST00000362806 113 ntBASIC2.48□□□□□ -2.01
RTN4Q9NQC3 U7.7-201ENST00000459276 60 ntBASIC2.48□□□□□ -2.01
RTN4Q9NQC3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.48□□□□□ -2.01
RTN4Q9NQC3 BX276092.1-201ENST00000427368 251 ntBASIC2.47□□□□□ -2.01
RTN4Q9NQC3 AC103810.7-201ENST00000607821 91 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms