Protein–RNA interactions for Protein: Q9H4Z3

PCIF1, Phosphorylated CTD-interacting factor 1, humanhuman

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1Q9H4Z3 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
PCIF1Q9H4Z3 MIR5009-201ENST00000578736 100 ntBASIC1.46□□□□□ -2.18
PCIF1Q9H4Z3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.46□□□□□ -2.18
PCIF1Q9H4Z3 AC105081.1-201ENST00000617727 106 ntBASIC1.46□□□□□ -2.18
PCIF1Q9H4Z3 AC012676.2-201ENST00000619258 186 ntBASIC1.46□□□□□ -2.18
PCIF1Q9H4Z3 AC008163.1-202ENST00000636004 2889 ntBASIC1.46□□□□□ -2.18
PCIF1Q9H4Z3 SNORD26-201ENST00000384147 75 ntBASIC1.45□□□□□ -2.18
PCIF1Q9H4Z3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.45□□□□□ -2.18
PCIF1Q9H4Z3 MIR222-201ENST00000384992 110 ntBASIC1.45□□□□□ -2.18
PCIF1Q9H4Z3 RNU6-554P-201ENST00000410466 106 ntBASIC1.45□□□□□ -2.18
PCIF1Q9H4Z3 PDCD5P2-201ENST00000507570 312 ntBASIC1.45□□□□□ -2.18
PCIF1Q9H4Z3 AL359821.1-201ENST00000605519 182 ntBASIC1.45□□□□□ -2.18
PCIF1Q9H4Z3 RNU6-94P-201ENST00000607728 107 ntBASIC1.45□□□□□ -2.18
PCIF1Q9H4Z3 AC106800.4-201ENST00000614905 153 ntBASIC1.45□□□□□ -2.18
PCIF1Q9H4Z3 SNORD114-10-201ENST00000363409 72 ntBASIC1.44□□□□□ -2.18
PCIF1Q9H4Z3 SNORA7.1-201ENST00000363750 139 ntBASIC1.44□□□□□ -2.18
PCIF1Q9H4Z3 SNORD115-35-201ENST00000365122 82 ntBASIC1.44□□□□□ -2.18
PCIF1Q9H4Z3 Y_RNA.448-201ENST00000384185 108 ntBASIC1.44□□□□□ -2.18
PCIF1Q9H4Z3 SNORA25-201ENST00000384384 134 ntBASIC1.44□□□□□ -2.18
PCIF1Q9H4Z3 RNU6-106P-201ENST00000384405 107 ntBASIC1.44□□□□□ -2.18
PCIF1Q9H4Z3 RNU6-679P-201ENST00000391003 106 ntBASIC1.44□□□□□ -2.18
PCIF1Q9H4Z3 SNORA7.5-201ENST00000410672 110 ntBASIC1.44□□□□□ -2.18
PCIF1Q9H4Z3 SNORD83.1-201ENST00000411362 77 ntBASIC1.44□□□□□ -2.18
PCIF1Q9H4Z3 Y_RNA.155-201ENST00000363632 101 ntBASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 RNU6-409P-201ENST00000384114 104 ntBASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 MIR605-201ENST00000385078 83 ntBASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 RNU6-1321P-201ENST00000390905 107 ntBASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 U8.15-201ENST00000390947 134 ntBASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 SNORD12-201ENST00000391002 90 ntBASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 AC096949.1-201ENST00000412047 152 ntBASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 AC004223.1-201ENST00000479840 271 ntBASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.43□□□□□ -2.18
PCIF1Q9H4Z3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 SNORD111-201ENST00000408139 94 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 RNU6-733P-201ENST00000410759 104 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 RNU6-321P-201ENST00000410912 106 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 RNA5SP247-201ENST00000411181 105 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 AC015818.7-201ENST00000428754 109 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 AC087499.7-201ENST00000441958 109 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 MIR18B-201ENST00000454574 71 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 TRMT112P2-201ENST00000512910 132 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 AC068338.1-201ENST00000565567 176 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 MIR4781-201ENST00000585250 76 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 AC027335.2-201ENST00000624030 375 ntBASIC1.42□□□□□ -2.18
PCIF1Q9H4Z3 RNU6-153P-201ENST00000364422 104 ntBASIC1.41□□□□□ -2.18
PCIF1Q9H4Z3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.41□□□□□ -2.18
PCIF1Q9H4Z3 MIR758-201ENST00000390227 88 ntBASIC1.41□□□□□ -2.18
PCIF1Q9H4Z3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
PCIF1Q9H4Z3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.41□□□□□ -2.18
PCIF1Q9H4Z3 RNU7-40P-201ENST00000516397 64 ntBASIC1.41□□□□□ -2.18
PCIF1Q9H4Z3 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
PCIF1Q9H4Z3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
PCIF1Q9H4Z3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.4□□□□□ -2.19
PCIF1Q9H4Z3 AC002429.1-201ENST00000437672 148 ntBASIC1.4□□□□□ -2.19
PCIF1Q9H4Z3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PCIF1Q9H4Z3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 MIR450A1-201ENST00000362262 91 ntBASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-1313P-201ENST00000362622 102 ntBASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 SNORA40.6-201ENST00000391153 128 ntBASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 SNORA19.1-201ENST00000410656 129 ntBASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 AC133485.1-201ENST00000567176 124 ntBASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 MIR4771-2-201ENST00000577758 74 ntBASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 MIR4771-1-201ENST00000582617 74 ntBASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 AL157834.3-201ENST00000615543 103 ntBASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 AC023934.1-201ENST00000574529 2389 ntBASIC1.39□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-865P-201ENST00000364772 107 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-934P-201ENST00000365154 107 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 MIR34C-201ENST00000384831 77 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 MIR577-201ENST00000385196 96 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 MIR1302-5-201ENST00000408164 150 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 AL031737.1-201ENST00000450125 223 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 RNU7-48P-201ENST00000458875 63 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 RNU7-185P-201ENST00000459215 60 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 UBL5P1-201ENST00000507979 193 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 AC019288.1-201ENST00000557918 224 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 MIR4694-201ENST00000578534 80 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 MIR376B-201ENST00000614515 100 ntBASIC1.38□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-369P-201ENST00000362515 102 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-147P-201ENST00000383983 107 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-1201P-201ENST00000384227 107 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 SNORD93-201ENST00000408813 74 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-447P-201ENST00000410293 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-355P-201ENST00000410427 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-791P-201ENST00000410467 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-994P-201ENST00000410507 111 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-705P-201ENST00000410601 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-860P-201ENST00000410860 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 322.3 ms