Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RNU6-865P-201ENST00000364772 107 ntBASIC1.88□□□□□ -2.11
VPS11Q9H270 MIR660-201ENST00000385235 97 ntBASIC1.88□□□□□ -2.11
VPS11Q9H270 SPINT5P-201ENST00000448174 155 ntBASIC1.88□□□□□ -2.11
VPS11Q9H270 RNU1-41P-201ENST00000516161 162 ntBASIC1.88□□□□□ -2.11
VPS11Q9H270 RNU1-48P-201ENST00000516400 162 ntBASIC1.88□□□□□ -2.11
VPS11Q9H270 AC015688.6-201ENST00000577737 104 ntBASIC1.88□□□□□ -2.11
VPS11Q9H270 AC012676.2-201ENST00000619258 186 ntBASIC1.88□□□□□ -2.11
VPS11Q9H270 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.88□□□□□ -2.11
VPS11Q9H270 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.88□□□□□ -2.11
VPS11Q9H270 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS11Q9H270 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
VPS11Q9H270 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
VPS11Q9H270 HSPE1P24-201ENST00000450782 238 ntBASIC1.87□□□□□ -2.11
VPS11Q9H270 RNU7-48P-201ENST00000458875 63 ntBASIC1.87□□□□□ -2.11
VPS11Q9H270 SNORA74.3-201ENST00000517108 154 ntBASIC1.87□□□□□ -2.11
VPS11Q9H270 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS11Q9H270 MIR302D-201ENST00000362275 68 ntBASIC1.86□□□□□ -2.11
VPS11Q9H270 SNORD114-10-201ENST00000363409 72 ntBASIC1.86□□□□□ -2.11
VPS11Q9H270 RNY1P13-201ENST00000365030 105 ntBASIC1.86□□□□□ -2.11
VPS11Q9H270 MIR1261-201ENST00000408659 82 ntBASIC1.86□□□□□ -2.11
VPS11Q9H270 MIR4648-201ENST00000580107 72 ntBASIC1.86□□□□□ -2.11
VPS11Q9H270 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS11Q9H270 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
VPS11Q9H270 SNORD33-201ENST00000362761 85 ntBASIC1.85□□□□□ -2.11
VPS11Q9H270 MIR513A1-201ENST00000385138 129 ntBASIC1.85□□□□□ -2.11
VPS11Q9H270 MIR548AO-201ENST00000579992 96 ntBASIC1.85□□□□□ -2.11
VPS11Q9H270 MIR4422-201ENST00000581938 83 ntBASIC1.85□□□□□ -2.11
VPS11Q9H270 MIR8063-201ENST00000621930 81 ntBASIC1.85□□□□□ -2.11
VPS11Q9H270 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS11Q9H270 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
VPS11Q9H270 RNU6-315P-201ENST00000362666 107 ntBASIC1.84□□□□□ -2.11
VPS11Q9H270 Y_RNA.57-201ENST00000362806 113 ntBASIC1.84□□□□□ -2.11
VPS11Q9H270 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
VPS11Q9H270 RNU1-78P-201ENST00000391248 165 ntBASIC1.84□□□□□ -2.11
VPS11Q9H270 RNU4-83P-201ENST00000410863 133 ntBASIC1.84□□□□□ -2.11
VPS11Q9H270 AL450471.1-201ENST00000447509 127 ntBASIC1.84□□□□□ -2.11
VPS11Q9H270 RNU6-917P-201ENST00000516294 104 ntBASIC1.84□□□□□ -2.11
VPS11Q9H270 SNORA25.13-201ENST00000516395 103 ntBASIC1.84□□□□□ -2.11
VPS11Q9H270 AC008133.2-201ENST00000624540 351 ntBASIC1.84□□□□□ -2.11
VPS11Q9H270 AP001362.1-201ENST00000625165 124 ntBASIC1.84□□□□□ -2.11
VPS11Q9H270 ZNF355P-201ENST00000427301 3216 ntBASIC1.84□□□□□ -2.12
VPS11Q9H270 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VPS11Q9H270 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VPS11Q9H270 HSBP1P2-201ENST00000299671 229 ntBASIC1.83□□□□□ -2.12
VPS11Q9H270 SNORD1A-201ENST00000364968 72 ntBASIC1.83□□□□□ -2.12
VPS11Q9H270 RNU7-85P-201ENST00000458851 63 ntBASIC1.83□□□□□ -2.12
VPS11Q9H270 SNORD4B-201ENST00000459083 72 ntBASIC1.83□□□□□ -2.12
VPS11Q9H270 RNA5SP445-201ENST00000515889 115 ntBASIC1.83□□□□□ -2.12
VPS11Q9H270 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
VPS11Q9H270 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
VPS11Q9H270 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.83□□□□□ -2.12
VPS11Q9H270 MIR4764-201ENST00000580680 88 ntBASIC1.83□□□□□ -2.12
VPS11Q9H270 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.83□□□□□ -2.12
VPS11Q9H270 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VPS11Q9H270 Y_RNA.98-201ENST00000363109 102 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-1237P-201ENST00000384777 107 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-447P-201ENST00000410293 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-1118P-201ENST00000410382 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-1076P-201ENST00000410397 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-355P-201ENST00000410427 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-791P-201ENST00000410467 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-705P-201ENST00000410601 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-1100P-201ENST00000410691 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-860P-201ENST00000410860 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-1217P-201ENST00000411276 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 RNU6-785P-201ENST00000411324 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VPS11Q9H270 AC079140.2-201ENST00000506193 142 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 MTND5P40-201ENST00000559945 246 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.82□□□□□ -2.12
VPS11Q9H270 U6.90-201ENST00000614007 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 U6.70-201ENST00000620287 104 ntBASIC1.82□□□□□ -2.12
VPS11Q9H270 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
VPS11Q9H270 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VPS11Q9H270 RNU6-624P-201ENST00000363411 107 ntBASIC1.81□□□□□ -2.12
VPS11Q9H270 Y_RNA.354-201ENST00000365448 111 ntBASIC1.81□□□□□ -2.12
VPS11Q9H270 RNA5SP259-201ENST00000365541 109 ntBASIC1.81□□□□□ -2.12
VPS11Q9H270 RNU6-129P-201ENST00000391022 107 ntBASIC1.81□□□□□ -2.12
VPS11Q9H270 RNU6-519P-201ENST00000410590 108 ntBASIC1.81□□□□□ -2.12
VPS11Q9H270 AC245517.4-201ENST00000448601 281 ntBASIC1.81□□□□□ -2.12
VPS11Q9H270 AC141846.1-201ENST00000568348 142 ntBASIC1.81□□□□□ -2.12
VPS11Q9H270 DEFB122-202ENST00000569013 197 ntBASIC1.81□□□□□ -2.12
VPS11Q9H270 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.81□□□□□ -2.12
VPS11Q9H270 U7.4-201ENST00000614961 63 ntBASIC1.81□□□□□ -2.12
VPS11Q9H270 RNU4-32P-201ENST00000363404 141 ntBASIC1.8□□□□□ -2.12
VPS11Q9H270 SNORD115-37-201ENST00000363768 82 ntBASIC1.8□□□□□ -2.12
VPS11Q9H270 RNU6-480P-201ENST00000384332 107 ntBASIC1.8□□□□□ -2.12
VPS11Q9H270 RNU7-41P-201ENST00000515917 61 ntBASIC1.8□□□□□ -2.12
VPS11Q9H270 RNU7-43P-201ENST00000516554 64 ntBASIC1.8□□□□□ -2.12
VPS11Q9H270 CYP3A52P-201ENST00000563326 91 ntBASIC1.8□□□□□ -2.12
VPS11Q9H270 MIR4285-201ENST00000581001 85 ntBASIC1.8□□□□□ -2.12
VPS11Q9H270 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.8□□□□□ -2.12
VPS11Q9H270 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS11Q9H270 WWP1P1-201ENST00000466609 2769 ntBASIC1.79□□□□□ -2.12
VPS11Q9H270 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
VPS11Q9H270 Y_RNA.168-201ENST00000363740 102 ntBASIC1.79□□□□□ -2.12
VPS11Q9H270 SNORD38.2-201ENST00000384470 69 ntBASIC1.79□□□□□ -2.12
VPS11Q9H270 Y_RNA.532-201ENST00000384590 113 ntBASIC1.79□□□□□ -2.12
VPS11Q9H270 Y_RNA.545-201ENST00000384652 105 ntBASIC1.79□□□□□ -2.12
VPS11Q9H270 AC003989.2-201ENST00000440224 169 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms