Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 RNU7-95P-201ENST00000459222 64 ntBASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-322P-201ENST00000516010 103 ntBASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-917P-201ENST00000516294 104 ntBASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 RNU7-35P-201ENST00000517174 62 ntBASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 AL513043.2-201ENST00000573941 143 ntBASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 MIR4764-201ENST00000580680 88 ntBASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 U7.4-201ENST00000614961 63 ntBASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.23□□□□□ -2.05
CNTNAP4Q9C0A0 AC080100.1-201ENST00000624239 5356 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 Y_RNA.545-201ENST00000384652 105 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 MIR653-201ENST00000385279 96 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-447P-201ENST00000410293 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-1118P-201ENST00000410382 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-1076P-201ENST00000410397 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-355P-201ENST00000410427 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-791P-201ENST00000410467 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-705P-201ENST00000410601 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-1100P-201ENST00000410691 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-860P-201ENST00000410860 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-1086P-201ENST00000410930 100 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-1217P-201ENST00000411276 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-785P-201ENST00000411324 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 MIR5194-201ENST00000582634 120 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 U6.90-201ENST00000614007 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 U6.70-201ENST00000620287 104 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 AC008133.2-201ENST00000624540 351 ntBASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CNTNAP4Q9C0A0 RNU6-315P-201ENST00000362666 107 ntBASIC2.21□□□□□ -2.06
CNTNAP4Q9C0A0 Y_RNA.57-201ENST00000362806 113 ntBASIC2.21□□□□□ -2.06
CNTNAP4Q9C0A0 RNU6-590P-201ENST00000365039 107 ntBASIC2.21□□□□□ -2.06
CNTNAP4Q9C0A0 RNU1-52P-201ENST00000384190 164 ntBASIC2.21□□□□□ -2.06
CNTNAP4Q9C0A0 Y_RNA.567-201ENST00000384736 106 ntBASIC2.21□□□□□ -2.06
CNTNAP4Q9C0A0 MIR520C-201ENST00000385005 87 ntBASIC2.21□□□□□ -2.06
CNTNAP4Q9C0A0 AC087499.7-201ENST00000441958 109 ntBASIC2.21□□□□□ -2.06
CNTNAP4Q9C0A0 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
CNTNAP4Q9C0A0 MIR6734-201ENST00000621166 68 ntBASIC2.21□□□□□ -2.06
CNTNAP4Q9C0A0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CNTNAP4Q9C0A0 RNA5SP212-201ENST00000391223 107 ntBASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 MIR548G-201ENST00000408442 89 ntBASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 HMGN1P33-201ENST00000432945 451 ntBASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 AC245047.7-201ENST00000440265 293 ntBASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 AL450471.1-201ENST00000447509 127 ntBASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 RNU1-40P-201ENST00000516816 164 ntBASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 RNU1-97P-201ENST00000516872 164 ntBASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 SNORA31.17-201ENST00000516953 127 ntBASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 SNORD14A-201ENST00000606526 91 ntBASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 AP000648.3-201ENST00000623539 4507 ntBASIC2.2□□□□□ -2.06
CNTNAP4Q9C0A0 Y_RNA.173-201ENST00000363776 113 ntBASIC2.19□□□□□ -2.06
CNTNAP4Q9C0A0 MIR194-1-201ENST00000384892 85 ntBASIC2.19□□□□□ -2.06
CNTNAP4Q9C0A0 AC004965.1-201ENST00000413033 213 ntBASIC2.19□□□□□ -2.06
CNTNAP4Q9C0A0 SCARNA18B-201ENST00000458806 135 ntBASIC2.19□□□□□ -2.06
CNTNAP4Q9C0A0 AL078603.1-201ENST00000603824 313 ntBASIC2.19□□□□□ -2.06
CNTNAP4Q9C0A0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CNTNAP4Q9C0A0 MIR8065-201ENST00000620577 100 ntBASIC2.19□□□□□ -2.06
CNTNAP4Q9C0A0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CNTNAP4Q9C0A0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CNTNAP4Q9C0A0 SNORD114-10-201ENST00000363409 72 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 SNORA16.1-201ENST00000364597 132 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 MIR181B2-201ENST00000385004 89 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 RPS29P28-201ENST00000446439 141 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 SNORA25.13-201ENST00000516395 103 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 SNORD67.1-201ENST00000516618 108 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 CYP3A52P-201ENST00000563326 91 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 MIR3134-201ENST00000579433 74 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 AL512598.1-201ENST00000610158 273 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CNTNAP4Q9C0A0 Y_RNA.448-201ENST00000384185 108 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 SNORD38B-201ENST00000384690 67 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 RNU6-1321P-201ENST00000390905 107 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 RNU6-129P-201ENST00000391022 107 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 RNU6-602P-201ENST00000411155 105 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 RNA5SP220-201ENST00000516298 104 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 SNORD38B-202ENST00000625943 69 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 RNU6-624P-201ENST00000363411 107 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 SNORA2B-201ENST00000384583 137 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 RNU7-79P-201ENST00000516082 62 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 RNU2-19P-201ENST00000517288 84 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 MIR4452-201ENST00000583004 71 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 MIR3935-201ENST00000583472 104 ntBASIC2.17□□□□□ -2.06
CNTNAP4Q9C0A0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CNTNAP4Q9C0A0 RNA5SP133-201ENST00000363368 119 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 299.4 ms