Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.71□□□□□ -2.3
PCGF1Q9BSM1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.71□□□□□ -2.3
PCGF1Q9BSM1 MIR548I1-201ENST00000408810 149 ntBASIC0.71□□□□□ -2.3
PCGF1Q9BSM1 Y_RNA.692-201ENST00000516627 105 ntBASIC0.71□□□□□ -2.3
PCGF1Q9BSM1 AP001328.1-201ENST00000528550 176 ntBASIC0.71□□□□□ -2.3
PCGF1Q9BSM1 MIR151B-201ENST00000584249 96 ntBASIC0.71□□□□□ -2.3
PCGF1Q9BSM1 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
PCGF1Q9BSM1 MIR8066-201ENST00000617280 78 ntBASIC0.71□□□□□ -2.3
PCGF1Q9BSM1 MIR6788-201ENST00000618842 66 ntBASIC0.71□□□□□ -2.3
PCGF1Q9BSM1 AL589743.1-201ENST00000551932 2712 ntBASIC0.7□□□□□ -2.3
PCGF1Q9BSM1 MIR373-201ENST00000362273 69 ntBASIC0.7□□□□□ -2.3
PCGF1Q9BSM1 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
PCGF1Q9BSM1 Y_RNA.488-201ENST00000384403 102 ntBASIC0.7□□□□□ -2.3
PCGF1Q9BSM1 RNU6-110P-201ENST00000384508 104 ntBASIC0.7□□□□□ -2.3
PCGF1Q9BSM1 MIR1270-201ENST00000459320 83 ntBASIC0.7□□□□□ -2.3
PCGF1Q9BSM1 RNY4P20-201ENST00000516678 93 ntBASIC0.7□□□□□ -2.3
PCGF1Q9BSM1 AC090897.1-201ENST00000580909 226 ntBASIC0.7□□□□□ -2.3
PCGF1Q9BSM1 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
PCGF1Q9BSM1 Y_RNA.42-201ENST00000362660 108 ntBASIC0.69□□□□□ -2.3
PCGF1Q9BSM1 RNU6-209P-201ENST00000384118 107 ntBASIC0.69□□□□□ -2.3
PCGF1Q9BSM1 snoU13.18-201ENST00000459483 104 ntBASIC0.69□□□□□ -2.3
PCGF1Q9BSM1 RNA5SP272-201ENST00000516095 111 ntBASIC0.69□□□□□ -2.3
PCGF1Q9BSM1 RNU6-426P-201ENST00000516464 97 ntBASIC0.69□□□□□ -2.3
PCGF1Q9BSM1 MIR3612-201ENST00000579753 87 ntBASIC0.69□□□□□ -2.3
PCGF1Q9BSM1 MIR4491-201ENST00000581087 68 ntBASIC0.69□□□□□ -2.3
PCGF1Q9BSM1 FAM71BP1-201ENST00000604431 523 ntBASIC0.69□□□□□ -2.3
PCGF1Q9BSM1 Y_RNA.114-201ENST00000363265 113 ntBASIC0.68□□□□□ -2.3
PCGF1Q9BSM1 Y_RNA.294-201ENST00000364916 102 ntBASIC0.68□□□□□ -2.3
PCGF1Q9BSM1 RNA5SP222-201ENST00000411039 105 ntBASIC0.68□□□□□ -2.3
PCGF1Q9BSM1 COX6CP6-201ENST00000490840 228 ntBASIC0.68□□□□□ -2.3
PCGF1Q9BSM1 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
PCGF1Q9BSM1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.68□□□□□ -2.3
PCGF1Q9BSM1 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.68□□□□□ -2.3
PCGF1Q9BSM1 IGKV1-22-201ENST00000524313 326 ntBASIC0.68□□□□□ -2.3
PCGF1Q9BSM1 AC022523.2-201ENST00000561045 150 ntBASIC0.68□□□□□ -2.3
PCGF1Q9BSM1 Y_RNA.13-201ENST00000362403 112 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 RNU6-403P-201ENST00000363163 104 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 Y_RNA.280-201ENST00000364765 112 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 Y_RNA.506-201ENST00000384494 102 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 MT-TR-201ENST00000387439 65 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 SNORD100-201ENST00000408573 76 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 RNU4-69P-201ENST00000410677 143 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 SNORD67.1-201ENST00000516618 108 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 AL359881.1-201ENST00000602916 267 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 MIR6082-201ENST00000613604 109 ntBASIC0.67□□□□□ -2.3
PCGF1Q9BSM1 RNY1P5-201ENST00000383890 115 ntBASIC0.66□□□□□ -2.3
PCGF1Q9BSM1 RNY1P8-201ENST00000383970 114 ntBASIC0.66□□□□□ -2.3
PCGF1Q9BSM1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.66□□□□□ -2.3
PCGF1Q9BSM1 RNU6-346P-201ENST00000516288 111 ntBASIC0.66□□□□□ -2.3
PCGF1Q9BSM1 RNU7-137P-201ENST00000516788 62 ntBASIC0.66□□□□□ -2.3
PCGF1Q9BSM1 RNU6-448P-201ENST00000517052 107 ntBASIC0.66□□□□□ -2.3
PCGF1Q9BSM1 U7.2-201ENST00000607576 63 ntBASIC0.66□□□□□ -2.3
PCGF1Q9BSM1 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
PCGF1Q9BSM1 MIR18A-201ENST00000362310 71 ntBASIC0.65□□□□□ -2.31
PCGF1Q9BSM1 Y_RNA.299-201ENST00000364973 94 ntBASIC0.65□□□□□ -2.31
PCGF1Q9BSM1 SNORA72.6-201ENST00000384520 129 ntBASIC0.65□□□□□ -2.31
PCGF1Q9BSM1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.65□□□□□ -2.31
PCGF1Q9BSM1 AC002350.1-201ENST00000490759 375 ntBASIC0.65□□□□□ -2.31
PCGF1Q9BSM1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.65□□□□□ -2.31
PCGF1Q9BSM1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.65□□□□□ -2.31
PCGF1Q9BSM1 RNU6-647P-201ENST00000364243 107 ntBASIC0.64□□□□□ -2.31
PCGF1Q9BSM1 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
PCGF1Q9BSM1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.64□□□□□ -2.31
PCGF1Q9BSM1 SNORA25.16-201ENST00000516741 121 ntBASIC0.64□□□□□ -2.31
PCGF1Q9BSM1 RNU6-765P-201ENST00000516916 99 ntBASIC0.64□□□□□ -2.31
PCGF1Q9BSM1 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
PCGF1Q9BSM1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
PCGF1Q9BSM1 RN7SKP19-201ENST00000516016 252 ntBASIC0.63□□□□□ -2.31
PCGF1Q9BSM1 AP003327.1-201ENST00000529684 127 ntBASIC0.63□□□□□ -2.31
PCGF1Q9BSM1 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
PCGF1Q9BSM1 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
PCGF1Q9BSM1 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
PCGF1Q9BSM1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
PCGF1Q9BSM1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.62□□□□□ -2.31
PCGF1Q9BSM1 SNORD114-10-201ENST00000363409 72 ntBASIC0.62□□□□□ -2.31
PCGF1Q9BSM1 Y_RNA.343-201ENST00000365354 112 ntBASIC0.62□□□□□ -2.31
PCGF1Q9BSM1 RNU4-45P-201ENST00000365469 141 ntBASIC0.62□□□□□ -2.31
PCGF1Q9BSM1 Y_RNA.568-201ENST00000384742 113 ntBASIC0.62□□□□□ -2.31
PCGF1Q9BSM1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
PCGF1Q9BSM1 MTND4LP9-201ENST00000427694 174 ntBASIC0.62□□□□□ -2.31
PCGF1Q9BSM1 AL158147.1-201ENST00000443970 75 ntBASIC0.62□□□□□ -2.31
PCGF1Q9BSM1 MIR6515-201ENST00000619843 57 ntBASIC0.62□□□□□ -2.31
PCGF1Q9BSM1 RNA5SP133-201ENST00000363368 119 ntBASIC0.61□□□□□ -2.31
PCGF1Q9BSM1 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
PCGF1Q9BSM1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.61□□□□□ -2.31
PCGF1Q9BSM1 AC138749.4-201ENST00000563970 127 ntBASIC0.61□□□□□ -2.31
PCGF1Q9BSM1 AC022709.1-201ENST00000615967 87 ntBASIC0.61□□□□□ -2.31
PCGF1Q9BSM1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.61□□□□□ -2.31
PCGF1Q9BSM1 AC105081.1-201ENST00000617727 106 ntBASIC0.61□□□□□ -2.31
PCGF1Q9BSM1 MIR7111-201ENST00000619751 72 ntBASIC0.61□□□□□ -2.31
PCGF1Q9BSM1 U6.109-201ENST00000636749 87 ntBASIC0.61□□□□□ -2.31
PCGF1Q9BSM1 RNA5SP117-201ENST00000365294 118 ntBASIC0.6□□□□□ -2.31
PCGF1Q9BSM1 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
PCGF1Q9BSM1 MIR489-201ENST00000384923 84 ntBASIC0.6□□□□□ -2.31
PCGF1Q9BSM1 MT-TI-201ENST00000387365 69 ntBASIC0.6□□□□□ -2.31
PCGF1Q9BSM1 SNORD77B-201ENST00000391112 67 ntBASIC0.6□□□□□ -2.31
PCGF1Q9BSM1 RNU6-257P-201ENST00000410238 98 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 248.7 ms