Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 RNU6-617P-201ENST00000516147 107 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 RNU6-473P-201ENST00000516164 107 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 RNU6-1049P-201ENST00000516414 107 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
KLHDC3Q9BQ90 SNORD115-2-201ENST00000362842 82 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.65-201ENST00000362846 100 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 SNORD115-20-201ENST00000365099 82 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.478-201ENST00000384358 107 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 MIRLET7F2-201ENST00000385277 83 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 MIR1302-3-201ENST00000408128 138 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 MTCYBP9-201ENST00000431021 303 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 DEFB131E-201ENST00000532329 154 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 MIR4305-201ENST00000583252 102 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.05□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.52-201ENST00000362760 96 ntBASIC0.04□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.350-201ENST00000365409 98 ntBASIC0.04□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.412-201ENST00000384001 104 ntBASIC0.04□□□□□ -2.4
KLHDC3Q9BQ90 RNU6-1126P-201ENST00000384002 107 ntBASIC0.04□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.470-201ENST00000384307 117 ntBASIC0.04□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.521-201ENST00000384560 114 ntBASIC0.04□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.668-201ENST00000516233 93 ntBASIC0.04□□□□□ -2.4
KLHDC3Q9BQ90 AL360085.1-201ENST00000604713 532 ntBASIC0.04□□□□□ -2.4
KLHDC3Q9BQ90 MIR6755-201ENST00000619993 66 ntBASIC0.04□□□□□ -2.4
KLHDC3Q9BQ90 RNA5SP133-201ENST00000363368 119 ntBASIC0.03□□□□□ -2.4
KLHDC3Q9BQ90 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
KLHDC3Q9BQ90 RNA5SP236-201ENST00000516169 116 ntBASIC0.03□□□□□ -2.4
KLHDC3Q9BQ90 RNU4-71P-201ENST00000516258 113 ntBASIC0.03□□□□□ -2.4
KLHDC3Q9BQ90 RNA5SP33-201ENST00000516687 98 ntBASIC0.03□□□□□ -2.4
KLHDC3Q9BQ90 RNU6-531P-201ENST00000516694 104 ntBASIC0.03□□□□□ -2.4
KLHDC3Q9BQ90 RNA5SP330-201ENST00000517096 96 ntBASIC0.03□□□□□ -2.4
KLHDC3Q9BQ90 MIR6779-201ENST00000617283 64 ntBASIC0.03□□□□□ -2.4
KLHDC3Q9BQ90 AC244669.1-204ENST00000621564 178 ntBASIC0.03□□□□□ -2.4
KLHDC3Q9BQ90 Y_RNA.435-201ENST00000384095 112 ntBASIC0.02□□□□□ -2.41
KLHDC3Q9BQ90 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.02□□□□□ -2.41
KLHDC3Q9BQ90 AC098479.1-201ENST00000609225 154 ntBASIC0.02□□□□□ -2.41
KLHDC3Q9BQ90 AC011603.4-201ENST00000611325 277 ntBASIC0.02□□□□□ -2.41
KLHDC3Q9BQ90 MIR2909-201ENST00000617113 69 ntBASIC0.02□□□□□ -2.41
KLHDC3Q9BQ90 TUG1_4.1-201ENST00000619464 181 ntBASIC0.02□□□□□ -2.41
KLHDC3Q9BQ90 U6.106-201ENST00000636360 105 ntBASIC0.02□□□□□ -2.41
KLHDC3Q9BQ90 MIR101-2-201ENST00000362195 79 ntBASIC0.01□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.120-201ENST00000363304 110 ntBASIC0.01□□□□□ -2.41
KLHDC3Q9BQ90 RNU6-690P-201ENST00000365242 106 ntBASIC0.01□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.477-201ENST00000384352 108 ntBASIC0.01□□□□□ -2.41
KLHDC3Q9BQ90 RNU6-1011P-201ENST00000384668 107 ntBASIC0.01□□□□□ -2.41
KLHDC3Q9BQ90 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.01□□□□□ -2.41
KLHDC3Q9BQ90 U6.109-201ENST00000636749 87 ntBASIC0.01□□□□□ -2.41
KLHDC3Q9BQ90 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.115-201ENST00000363272 98 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 RNA5SP214-201ENST00000363378 118 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.133-201ENST00000363428 110 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.251-201ENST00000364551 99 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.362-201ENST00000365518 110 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 RNU6-1336P-201ENST00000383886 109 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.423-201ENST00000384057 113 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 MIR1197-201ENST00000408818 88 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 RNU7-137P-201ENST00000516788 62 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 AL109933.3-201ENST00000619095 188 ntBASIC0□□□□□ -2.41
KLHDC3Q9BQ90 SNORD114-10-201ENST00000363409 72 ntBASIC-0.01□□□□□ -2.41
KLHDC3Q9BQ90 SNORA32-201ENST00000384072 121 ntBASIC-0.01□□□□□ -2.41
KLHDC3Q9BQ90 RNU6-187P-201ENST00000384139 106 ntBASIC-0.01□□□□□ -2.41
KLHDC3Q9BQ90 RNU6-768P-201ENST00000384683 107 ntBASIC-0.01□□□□□ -2.41
KLHDC3Q9BQ90 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
KLHDC3Q9BQ90 PCNPP3-201ENST00000393579 471 ntBASIC-0.01□□□□□ -2.41
KLHDC3Q9BQ90 AC107027.2-201ENST00000512197 115 ntBASIC-0.01□□□□□ -2.41
KLHDC3Q9BQ90 AC138749.4-201ENST00000563970 127 ntBASIC-0.01□□□□□ -2.41
KLHDC3Q9BQ90 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 SNORA63.5-201ENST00000363548 123 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 RNA5SP245-201ENST00000364239 121 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 RNU6-818P-201ENST00000364837 108 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 RNU6-918P-201ENST00000391219 106 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 MTATP6P21-201ENST00000440681 189 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 SNORD67.1-201ENST00000516618 108 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 MIR3128-201ENST00000581957 66 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 MIR548AE2-201ENST00000583456 67 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 MIR3149-201ENST00000584629 83 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 AC062037.2-201ENST00000610137 73 ntBASIC-0.02□□□□□ -2.41
KLHDC3Q9BQ90 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
KLHDC3Q9BQ90 RNU6-302P-201ENST00000365249 107 ntBASIC-0.03□□□□□ -2.41
KLHDC3Q9BQ90 RNA5SP128-201ENST00000365305 116 ntBASIC-0.03□□□□□ -2.41
KLHDC3Q9BQ90 SNORA2A-201ENST00000383885 135 ntBASIC-0.03□□□□□ -2.41
KLHDC3Q9BQ90 MIR568-201ENST00000385036 95 ntBASIC-0.03□□□□□ -2.41
KLHDC3Q9BQ90 MIR610-201ENST00000385139 96 ntBASIC-0.03□□□□□ -2.41
KLHDC3Q9BQ90 SNORA75.5-201ENST00000391291 81 ntBASIC-0.03□□□□□ -2.41
KLHDC3Q9BQ90 AC244505.6-201ENST00000452829 130 ntBASIC-0.03□□□□□ -2.41
KLHDC3Q9BQ90 RNU7-129P-201ENST00000516128 62 ntBASIC-0.03□□□□□ -2.41
KLHDC3Q9BQ90 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.04□□□□□ -2.42
KLHDC3Q9BQ90 RNA5SP257-201ENST00000363023 116 ntBASIC-0.04□□□□□ -2.42
KLHDC3Q9BQ90 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms