Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MIR5009-201ENST00000578736 100 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 AL157834.3-201ENST00000615543 103 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SNX18Q96RF0 MIR377-201ENST00000362145 69 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 RNU6-755P-201ENST00000364400 103 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 RNU6-106P-201ENST00000384405 107 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 MIR206-201ENST00000384872 86 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 MIR563-201ENST00000385080 79 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 MIR1912-201ENST00000410389 80 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 RNU6-554P-201ENST00000410466 106 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 RNU6-521P-201ENST00000516663 105 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 RNU7-137P-201ENST00000516788 62 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 AC105081.1-201ENST00000617727 106 ntBASIC1.25□□□□□ -2.21
SNX18Q96RF0 MIR30D-201ENST00000362283 70 ntBASIC1.24□□□□□ -2.21
SNX18Q96RF0 RNU6-363P-201ENST00000362895 105 ntBASIC1.24□□□□□ -2.21
SNX18Q96RF0 Y_RNA.323-201ENST00000365157 109 ntBASIC1.24□□□□□ -2.21
SNX18Q96RF0 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
SNX18Q96RF0 MTATP6P29-201ENST00000415057 132 ntBASIC1.24□□□□□ -2.21
SNX18Q96RF0 MRPL35P3-201ENST00000421557 364 ntBASIC1.24□□□□□ -2.21
SNX18Q96RF0 snoU13.18-201ENST00000459483 104 ntBASIC1.24□□□□□ -2.21
SNX18Q96RF0 SNORD79.1-201ENST00000516069 84 ntBASIC1.24□□□□□ -2.21
SNX18Q96RF0 RNU7-2P-201ENST00000516096 62 ntBASIC1.24□□□□□ -2.21
SNX18Q96RF0 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
SNX18Q96RF0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.24□□□□□ -2.21
SNX18Q96RF0 Y_RNA.163-201ENST00000363702 113 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 Y_RNA.168-201ENST00000363740 102 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 RNU6-153P-201ENST00000364422 104 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 RNU6-580P-201ENST00000365159 107 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 RNU6-949P-201ENST00000384040 107 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 RNU6-409P-201ENST00000384114 104 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 MIR605-201ENST00000385078 83 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 snoU13.21-201ENST00000459368 105 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 RNU7-21P-201ENST00000459430 62 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 AC036111.3-201ENST00000526389 112 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 SNORA4-201ENST00000584302 138 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 RNU6-94P-201ENST00000607728 107 ntBASIC1.23□□□□□ -2.21
SNX18Q96RF0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SNX18Q96RF0 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 MIR450A1-201ENST00000362262 91 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 SNORD114-10-201ENST00000363409 72 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 SNORD113.3-201ENST00000364630 78 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 SNORD115-35-201ENST00000365122 82 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 Y_RNA.448-201ENST00000384185 108 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 RNU6-1307P-201ENST00000391012 103 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 MIR1302-5-201ENST00000408164 150 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 RNU6-733P-201ENST00000410759 104 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 AL031737.1-201ENST00000450125 223 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.22□□□□□ -2.21
SNX18Q96RF0 AC008163.1-202ENST00000636004 2889 ntBASIC1.21□□□□□ -2.22
SNX18Q96RF0 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
SNX18Q96RF0 RNU6-1321P-201ENST00000390905 107 ntBASIC1.21□□□□□ -2.22
SNX18Q96RF0 RNU6-679P-201ENST00000391003 106 ntBASIC1.21□□□□□ -2.22
SNX18Q96RF0 AL353813.1-201ENST00000440700 253 ntBASIC1.21□□□□□ -2.22
SNX18Q96RF0 RNU7-90P-201ENST00000459216 62 ntBASIC1.21□□□□□ -2.22
SNX18Q96RF0 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
SNX18Q96RF0 AC012676.2-201ENST00000619258 186 ntBASIC1.21□□□□□ -2.22
SNX18Q96RF0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
SNX18Q96RF0 Y_RNA.360-201ENST00000365512 102 ntBASIC1.2□□□□□ -2.22
SNX18Q96RF0 RNU6-147P-201ENST00000383983 107 ntBASIC1.2□□□□□ -2.22
SNX18Q96RF0 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
SNX18Q96RF0 MT-TF-201ENST00000387314 71 ntBASIC1.2□□□□□ -2.22
SNX18Q96RF0 U8.15-201ENST00000390947 134 ntBASIC1.2□□□□□ -2.22
SNX18Q96RF0 SNORD12-201ENST00000391002 90 ntBASIC1.2□□□□□ -2.22
SNX18Q96RF0 SNORD83.1-201ENST00000411362 77 ntBASIC1.2□□□□□ -2.22
SNX18Q96RF0 AC141557.1-201ENST00000540982 400 ntBASIC1.2□□□□□ -2.22
SNX18Q96RF0 SNORA51.5-201ENST00000384126 131 ntBASIC1.19□□□□□ -2.22
SNX18Q96RF0 SNORA19.1-201ENST00000410656 129 ntBASIC1.19□□□□□ -2.22
SNX18Q96RF0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.19□□□□□ -2.22
SNX18Q96RF0 AC015818.7-201ENST00000428754 109 ntBASIC1.19□□□□□ -2.22
SNX18Q96RF0 AC087499.7-201ENST00000441958 109 ntBASIC1.19□□□□□ -2.22
SNX18Q96RF0 AC019288.1-201ENST00000557918 224 ntBASIC1.19□□□□□ -2.22
SNX18Q96RF0 AC106800.4-201ENST00000614905 153 ntBASIC1.19□□□□□ -2.22
SNX18Q96RF0 AL353770.2-201ENST00000620024 78 ntBASIC1.19□□□□□ -2.22
SNX18Q96RF0 AL512310.12-203ENST00000640543 90 ntBASIC1.19□□□□□ -2.22
SNX18Q96RF0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SNX18Q96RF0 RNU6-865P-201ENST00000364772 107 ntBASIC1.18□□□□□ -2.22
SNX18Q96RF0 RNU6-756P-201ENST00000383997 107 ntBASIC1.18□□□□□ -2.22
SNX18Q96RF0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SNX18Q96RF0 SNORD111-201ENST00000408139 94 ntBASIC1.18□□□□□ -2.22
SNX18Q96RF0 MIR18B-201ENST00000454574 71 ntBASIC1.18□□□□□ -2.22
SNX18Q96RF0 AC133485.1-201ENST00000567176 124 ntBASIC1.18□□□□□ -2.22
SNX18Q96RF0 AC023934.1-201ENST00000574529 2389 ntBASIC1.17□□□□□ -2.22
SNX18Q96RF0 RNU6-392P-201ENST00000364926 101 ntBASIC1.17□□□□□ -2.22
SNX18Q96RF0 RNU6-934P-201ENST00000365154 107 ntBASIC1.17□□□□□ -2.22
SNX18Q96RF0 Y_RNA.328-201ENST00000365208 113 ntBASIC1.17□□□□□ -2.22
SNX18Q96RF0 MIR34C-201ENST00000384831 77 ntBASIC1.17□□□□□ -2.22
SNX18Q96RF0 MIR489-201ENST00000384923 84 ntBASIC1.17□□□□□ -2.22
SNX18Q96RF0 MIR577-201ENST00000385196 96 ntBASIC1.17□□□□□ -2.22
SNX18Q96RF0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.17□□□□□ -2.22
SNX18Q96RF0 SNORD93-201ENST00000408813 74 ntBASIC1.17□□□□□ -2.22
SNX18Q96RF0 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
SNX18Q96RF0 RNU7-48P-201ENST00000458875 63 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms