Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 Y_RNA.119-201ENST00000363301 96 ntBASIC2.66□□□□□ -1.98
CNTNAP3BQ96NU0 RNU1-51P-201ENST00000365345 176 ntBASIC2.66□□□□□ -1.98
CNTNAP3BQ96NU0 RNU6-895P-201ENST00000384125 103 ntBASIC2.66□□□□□ -1.98
CNTNAP3BQ96NU0 RNU6-466P-201ENST00000391224 103 ntBASIC2.66□□□□□ -1.98
CNTNAP3BQ96NU0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.66□□□□□ -1.98
CNTNAP3BQ96NU0 MIR4764-201ENST00000580680 88 ntBASIC2.66□□□□□ -1.98
CNTNAP3BQ96NU0 MIR3675-201ENST00000583661 73 ntBASIC2.66□□□□□ -1.98
CNTNAP3BQ96NU0 U1.36-201ENST00000620684 176 ntBASIC2.66□□□□□ -1.98
CNTNAP3BQ96NU0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CNTNAP3BQ96NU0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.65□□□□□ -1.98
CNTNAP3BQ96NU0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.65□□□□□ -1.98
CNTNAP3BQ96NU0 SNORD115-22-201ENST00000364456 82 ntBASIC2.65□□□□□ -1.99
CNTNAP3BQ96NU0 RNU6-1051P-201ENST00000365471 102 ntBASIC2.65□□□□□ -1.99
CNTNAP3BQ96NU0 AL023284.1-201ENST00000403956 276 ntBASIC2.65□□□□□ -1.99
CNTNAP3BQ96NU0 SNORD88.1-201ENST00000408684 91 ntBASIC2.65□□□□□ -1.99
CNTNAP3BQ96NU0 snoU13.27-201ENST00000459278 104 ntBASIC2.65□□□□□ -1.99
CNTNAP3BQ96NU0 AP004217.1-201ENST00000480579 346 ntBASIC2.65□□□□□ -1.99
CNTNAP3BQ96NU0 RNVU1-2-201ENST00000516326 135 ntBASIC2.65□□□□□ -1.99
CNTNAP3BQ96NU0 SUB1P4-201ENST00000566062 339 ntBASIC2.65□□□□□ -1.99
CNTNAP3BQ96NU0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CNTNAP3BQ96NU0 AC073325.2-201ENST00000339545 159 ntBASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 RNU6-957P-201ENST00000363652 99 ntBASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 Y_RNA.207-201ENST00000364142 106 ntBASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 Y_RNA.371-201ENST00000365591 113 ntBASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 RNA5SP270-201ENST00000411361 118 ntBASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 RNU7-106P-201ENST00000459514 67 ntBASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 RPL23AP42-201ENST00000471152 471 ntBASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 RNU6-881P-201ENST00000516813 102 ntBASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 U4.3-201ENST00000621047 82 ntBASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CNTNAP3BQ96NU0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CNTNAP3BQ96NU0 Y_RNA.606-201ENST00000410579 103 ntBASIC2.63□□□□□ -1.99
CNTNAP3BQ96NU0 AC244023.1-201ENST00000426884 112 ntBASIC2.63□□□□□ -1.99
CNTNAP3BQ96NU0 AC099513.1-201ENST00000490423 301 ntBASIC2.63□□□□□ -1.99
CNTNAP3BQ96NU0 RNA5SP480-201ENST00000516840 109 ntBASIC2.63□□□□□ -1.99
CNTNAP3BQ96NU0 AC242498.1-201ENST00000604134 111 ntBASIC2.63□□□□□ -1.99
CNTNAP3BQ96NU0 MIR8053-201ENST00000613344 75 ntBASIC2.63□□□□□ -1.99
CNTNAP3BQ96NU0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CNTNAP3BQ96NU0 RNU6-112P-201ENST00000363599 104 ntBASIC2.62□□□□□ -1.99
CNTNAP3BQ96NU0 Y_RNA.236-201ENST00000364427 111 ntBASIC2.62□□□□□ -1.99
CNTNAP3BQ96NU0 Y_RNA.540-201ENST00000384638 111 ntBASIC2.62□□□□□ -1.99
CNTNAP3BQ96NU0 AL356320.1-201ENST00000429616 163 ntBASIC2.62□□□□□ -1.99
CNTNAP3BQ96NU0 snoU13.2-201ENST00000459201 104 ntBASIC2.62□□□□□ -1.99
CNTNAP3BQ96NU0 RNA5SP437-201ENST00000517249 129 ntBASIC2.62□□□□□ -1.99
CNTNAP3BQ96NU0 MIR4658-201ENST00000584344 65 ntBASIC2.62□□□□□ -1.99
CNTNAP3BQ96NU0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.61□□□□□ -1.99
CNTNAP3BQ96NU0 RNU6-829P-201ENST00000363700 112 ntBASIC2.61□□□□□ -1.99
CNTNAP3BQ96NU0 MIR563-201ENST00000385080 79 ntBASIC2.61□□□□□ -1.99
CNTNAP3BQ96NU0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.61□□□□□ -1.99
CNTNAP3BQ96NU0 RNA5SP21-201ENST00000410917 96 ntBASIC2.61□□□□□ -1.99
CNTNAP3BQ96NU0 RNA5SP501-201ENST00000410990 112 ntBASIC2.61□□□□□ -1.99
CNTNAP3BQ96NU0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CNTNAP3BQ96NU0 AC007318.2-201ENST00000620999 243 ntBASIC2.61□□□□□ -1.99
CNTNAP3BQ96NU0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CNTNAP3BQ96NU0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CNTNAP3BQ96NU0 RNU6-1216P-201ENST00000362590 107 ntBASIC2.6□□□□□ -1.99
CNTNAP3BQ96NU0 RNA5SP492-201ENST00000411330 114 ntBASIC2.6□□□□□ -1.99
CNTNAP3BQ96NU0 AL161431.1-201ENST00000618966 4205 ntBASIC2.59□□□□□ -1.99
CNTNAP3BQ96NU0 MIR520C-201ENST00000385005 87 ntBASIC2.59□□□□□ -1.99
CNTNAP3BQ96NU0 MIR1273D-201ENST00000577266 86 ntBASIC2.59□□□□□ -1.99
CNTNAP3BQ96NU0 MIR3935-201ENST00000583472 104 ntBASIC2.59□□□□□ -1.99
CNTNAP3BQ96NU0 MIR4251-201ENST00000635819 61 ntBASIC2.59□□□□□ -1.99
CNTNAP3BQ96NU0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CNTNAP3BQ96NU0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CNTNAP3BQ96NU0 MIR424-201ENST00000362227 98 ntBASIC2.58□□□□□ -2
CNTNAP3BQ96NU0 SNORD45.1-201ENST00000363181 77 ntBASIC2.58□□□□□ -2
CNTNAP3BQ96NU0 SNORD113.1-201ENST00000363280 73 ntBASIC2.58□□□□□ -2
CNTNAP3BQ96NU0 SNORA64-201ENST00000384674 134 ntBASIC2.58□□□□□ -2
CNTNAP3BQ96NU0 RNA5SP274-201ENST00000410484 108 ntBASIC2.58□□□□□ -2
CNTNAP3BQ96NU0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.58□□□□□ -2
CNTNAP3BQ96NU0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.58□□□□□ -2
CNTNAP3BQ96NU0 ZNF209P-201ENST00000593450 2304 ntBASIC2.58□□□□□ -2
CNTNAP3BQ96NU0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.57□□□□□ -2
CNTNAP3BQ96NU0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CNTNAP3BQ96NU0 SNORA40.6-201ENST00000391153 128 ntBASIC2.57□□□□□ -2
CNTNAP3BQ96NU0 RNU6-1194P-201ENST00000516208 104 ntBASIC2.57□□□□□ -2
CNTNAP3BQ96NU0 RNU2-19P-201ENST00000517288 84 ntBASIC2.57□□□□□ -2
CNTNAP3BQ96NU0 snoU13.31-201ENST00000607291 104 ntBASIC2.57□□□□□ -2
CNTNAP3BQ96NU0 AL096861.1-201ENST00000610899 123 ntBASIC2.57□□□□□ -2
CNTNAP3BQ96NU0 AC069503.3-201ENST00000618674 145 ntBASIC2.57□□□□□ -2
CNTNAP3BQ96NU0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CNTNAP3BQ96NU0 RNU1-17P-201ENST00000363022 152 ntBASIC2.56□□□□□ -2
CNTNAP3BQ96NU0 RNY4P3-201ENST00000365254 95 ntBASIC2.56□□□□□ -2
CNTNAP3BQ96NU0 RNU6-321P-201ENST00000410912 106 ntBASIC2.56□□□□□ -2
CNTNAP3BQ96NU0 SNORD63B-201ENST00000411005 70 ntBASIC2.56□□□□□ -2
CNTNAP3BQ96NU0 RN7SL633P-201ENST00000488974 297 ntBASIC2.56□□□□□ -2
CNTNAP3BQ96NU0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.56□□□□□ -2
CNTNAP3BQ96NU0 U6.81-201ENST00000612550 106 ntBASIC2.56□□□□□ -2
CNTNAP3BQ96NU0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.56□□□□□ -2
CNTNAP3BQ96NU0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.55□□□□□ -2
CNTNAP3BQ96NU0 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
CNTNAP3BQ96NU0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
CNTNAP3BQ96NU0 MIR30D-201ENST00000362283 70 ntBASIC2.55□□□□□ -2
CNTNAP3BQ96NU0 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.55□□□□□ -2
CNTNAP3BQ96NU0 AC009474.2-201ENST00000451383 136 ntBASIC2.55□□□□□ -2
CNTNAP3BQ96NU0 RNU7-41P-201ENST00000515917 61 ntBASIC2.55□□□□□ -2
CNTNAP3BQ96NU0 MIR4529-201ENST00000578110 78 ntBASIC2.55□□□□□ -2
CNTNAP3BQ96NU0 MIR3140-201ENST00000583685 90 ntBASIC2.55□□□□□ -2
CNTNAP3BQ96NU0 SNORA4-201ENST00000584302 138 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms