Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU6-1335P-201ENST00000365426 107 ntBASIC1.08□□□□□ -2.24
CDK5RAP3Q96JB5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CDK5RAP3Q96JB5 MIR938-201ENST00000401216 83 ntBASIC1.08□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-735P-201ENST00000410612 107 ntBASIC1.08□□□□□ -2.24
CDK5RAP3Q96JB5 ACA64.5-201ENST00000516207 127 ntBASIC1.08□□□□□ -2.24
CDK5RAP3Q96JB5 RNU7-137P-201ENST00000516788 62 ntBASIC1.08□□□□□ -2.24
CDK5RAP3Q96JB5 AL359881.1-201ENST00000602916 267 ntBASIC1.08□□□□□ -2.24
CDK5RAP3Q96JB5 FAM71BP1-201ENST00000604431 523 ntBASIC1.08□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-403P-201ENST00000363163 104 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 RNY1P10-201ENST00000363268 113 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-364P-201ENST00000384387 107 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 RNU4-83P-201ENST00000410863 133 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 AC008267.6-201ENST00000441664 139 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-789P-201ENST00000517105 102 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 RNU7-156P-201ENST00000517214 74 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 RMST_2.1-201ENST00000617263 136 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 AC105081.1-201ENST00000617727 106 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 AC087741.2-201ENST00000619415 172 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 MIR3914-2-201ENST00000637339 95 ntBASIC1.07□□□□□ -2.24
CDK5RAP3Q96JB5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDK5RAP3Q96JB5 SNORD114-10-201ENST00000363409 72 ntBASIC1.06□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-616P-201ENST00000384353 107 ntBASIC1.06□□□□□ -2.24
CDK5RAP3Q96JB5 SNORD105-201ENST00000386910 85 ntBASIC1.06□□□□□ -2.24
CDK5RAP3Q96JB5 AC025627.3-201ENST00000582078 182 ntBASIC1.06□□□□□ -2.24
CDK5RAP3Q96JB5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.06□□□□□ -2.24
CDK5RAP3Q96JB5 AL365222.1-201ENST00000614661 98 ntBASIC1.06□□□□□ -2.24
CDK5RAP3Q96JB5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.06□□□□□ -2.24
CDK5RAP3Q96JB5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 Y_RNA.261-201ENST00000364631 102 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-1117P-201ENST00000384525 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-447P-201ENST00000410293 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-1118P-201ENST00000410382 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-1076P-201ENST00000410397 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-355P-201ENST00000410427 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-791P-201ENST00000410467 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-705P-201ENST00000410601 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-1100P-201ENST00000410691 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-860P-201ENST00000410860 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-1217P-201ENST00000411276 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-785P-201ENST00000411324 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 AC096949.1-201ENST00000412047 152 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 MIR4491-201ENST00000581087 68 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 U6.90-201ENST00000614007 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 U6.70-201ENST00000620287 104 ntBASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
CDK5RAP3Q96JB5 MIR337-201ENST00000362281 93 ntBASIC1.04□□□□□ -2.24
CDK5RAP3Q96JB5 RNY4P6-201ENST00000363667 96 ntBASIC1.04□□□□□ -2.24
CDK5RAP3Q96JB5 SNORA72.6-201ENST00000384520 129 ntBASIC1.04□□□□□ -2.24
CDK5RAP3Q96JB5 MIR520H-201ENST00000385126 88 ntBASIC1.04□□□□□ -2.24
CDK5RAP3Q96JB5 RNU1-119P-201ENST00000391122 165 ntBASIC1.04□□□□□ -2.24
CDK5RAP3Q96JB5 RNU7-56P-201ENST00000458744 62 ntBASIC1.04□□□□□ -2.24
CDK5RAP3Q96JB5 AC133485.1-201ENST00000567176 124 ntBASIC1.04□□□□□ -2.24
CDK5RAP3Q96JB5 U6.95-201ENST00000636931 70 ntBASIC1.04□□□□□ -2.24
CDK5RAP3Q96JB5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
CDK5RAP3Q96JB5 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
CDK5RAP3Q96JB5 MIR206-201ENST00000384872 86 ntBASIC1.03□□□□□ -2.24
CDK5RAP3Q96JB5 MIR548D2-201ENST00000384955 97 ntBASIC1.03□□□□□ -2.24
CDK5RAP3Q96JB5 Y_RNA.588-201ENST00000391254 102 ntBASIC1.03□□□□□ -2.24
CDK5RAP3Q96JB5 RNU7-102P-201ENST00000458948 62 ntBASIC1.03□□□□□ -2.24
CDK5RAP3Q96JB5 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
CDK5RAP3Q96JB5 SNORD33.1-201ENST00000516213 88 ntBASIC1.03□□□□□ -2.24
CDK5RAP3Q96JB5 RNU6-62P-201ENST00000516526 102 ntBASIC1.03□□□□□ -2.24
CDK5RAP3Q96JB5 SNORD92-201ENST00000585078 85 ntBASIC1.03□□□□□ -2.24
CDK5RAP3Q96JB5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CDK5RAP3Q96JB5 RNU6-22P-201ENST00000384355 107 ntBASIC1.02□□□□□ -2.25
CDK5RAP3Q96JB5 Y_RNA.649-201ENST00000459077 103 ntBASIC1.02□□□□□ -2.25
CDK5RAP3Q96JB5 RNU7-2P-201ENST00000516096 62 ntBASIC1.02□□□□□ -2.25
CDK5RAP3Q96JB5 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
CDK5RAP3Q96JB5 Y_RNA.773-201ENST00000607168 90 ntBASIC1.02□□□□□ -2.25
CDK5RAP3Q96JB5 U6.109-201ENST00000636749 87 ntBASIC1.02□□□□□ -2.25
CDK5RAP3Q96JB5 Y_RNA.13-201ENST00000362403 112 ntBASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 SNORD115-19-201ENST00000363098 82 ntBASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 SNORD115-18-201ENST00000363293 82 ntBASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 SNORD115-17-201ENST00000364612 82 ntBASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 Y_RNA.448-201ENST00000384185 108 ntBASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 RNU6-1321P-201ENST00000390905 107 ntBASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 SNORD99-201ENST00000408612 74 ntBASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 AL606753.1-201ENST00000427435 87 ntBASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 DEFB131E-201ENST00000532329 154 ntBASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 AC008608.1-201ENST00000603910 127 ntBASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CDK5RAP3Q96JB5 RNA5SP133-201ENST00000363368 119 ntBASIC1□□□□□ -2.25
CDK5RAP3Q96JB5 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
CDK5RAP3Q96JB5 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
CDK5RAP3Q96JB5 MIR548A3-201ENST00000385297 97 ntBASIC1□□□□□ -2.25
CDK5RAP3Q96JB5 PSMC1P5-201ENST00000512850 177 ntBASIC1□□□□□ -2.25
CDK5RAP3Q96JB5 RNU6-406P-201ENST00000516470 107 ntBASIC1□□□□□ -2.25
CDK5RAP3Q96JB5 SNORA25.16-201ENST00000516741 121 ntBASIC1□□□□□ -2.25
CDK5RAP3Q96JB5 MIR8066-201ENST00000617280 78 ntBASIC1□□□□□ -2.25
CDK5RAP3Q96JB5 MIR1255B1-201ENST00000636325 63 ntBASIC1□□□□□ -2.25
CDK5RAP3Q96JB5 SNORD115-35-201ENST00000365122 82 ntBASIC0.99□□□□□ -2.25
CDK5RAP3Q96JB5 Y_RNA.344-201ENST00000365381 112 ntBASIC0.99□□□□□ -2.25
CDK5RAP3Q96JB5 MIR6082-201ENST00000613604 109 ntBASIC0.99□□□□□ -2.25
CDK5RAP3Q96JB5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CDK5RAP3Q96JB5 Y_RNA.42-201ENST00000362660 108 ntBASIC0.98□□□□□ -2.25
CDK5RAP3Q96JB5 SNORD113-1-201ENST00000365321 69 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 296.9 ms