Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 RNU6-785P-201ENST00000411324 104 ntBASIC2.08□□□□□ -2.08
SHISA4Q96DD7 AC004965.1-201ENST00000413033 213 ntBASIC2.08□□□□□ -2.08
SHISA4Q96DD7 RNU6-322P-201ENST00000516010 103 ntBASIC2.08□□□□□ -2.08
SHISA4Q96DD7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.08□□□□□ -2.08
SHISA4Q96DD7 U6.90-201ENST00000614007 104 ntBASIC2.08□□□□□ -2.08
SHISA4Q96DD7 U6.70-201ENST00000620287 104 ntBASIC2.08□□□□□ -2.08
SHISA4Q96DD7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.08□□□□□ -2.08
SHISA4Q96DD7 SNORD114-10-201ENST00000363409 72 ntBASIC2.07□□□□□ -2.08
SHISA4Q96DD7 Y_RNA.247-201ENST00000364500 92 ntBASIC2.07□□□□□ -2.08
SHISA4Q96DD7 SNORA16.1-201ENST00000364597 132 ntBASIC2.07□□□□□ -2.08
SHISA4Q96DD7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.07□□□□□ -2.08
SHISA4Q96DD7 SNORD67.1-201ENST00000516618 108 ntBASIC2.07□□□□□ -2.08
SHISA4Q96DD7 SNORA31.17-201ENST00000516953 127 ntBASIC2.07□□□□□ -2.08
SHISA4Q96DD7 RNU6-1006P-201ENST00000516998 103 ntBASIC2.07□□□□□ -2.08
SHISA4Q96DD7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.07□□□□□ -2.08
SHISA4Q96DD7 MIR4668-201ENST00000582284 70 ntBASIC2.07□□□□□ -2.08
SHISA4Q96DD7 AC103810.7-201ENST00000607821 91 ntBASIC2.07□□□□□ -2.08
SHISA4Q96DD7 AL512598.1-201ENST00000610158 273 ntBASIC2.07□□□□□ -2.08
SHISA4Q96DD7 RNU6-776P-201ENST00000364403 104 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 RNU6-1163P-201ENST00000364516 107 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 RNU6-1022P-201ENST00000365049 104 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 Y_RNA.448-201ENST00000384185 108 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 RNU6-24P-201ENST00000384440 107 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 SNORD38.2-201ENST00000384470 69 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 SNORD38B-201ENST00000384690 67 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 MIR34C-201ENST00000384831 77 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 MIR676-201ENST00000390702 67 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 RNA5SP450-201ENST00000411206 102 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 RNU6-917P-201ENST00000516294 104 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 MIR4448-201ENST00000584360 86 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 RNU6-90P-201ENST00000606352 106 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 SNORD38B-202ENST00000625943 69 ntBASIC2.06□□□□□ -2.08
SHISA4Q96DD7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHISA4Q96DD7 Y_RNA.98-201ENST00000363109 102 ntBASIC2.05□□□□□ -2.08
SHISA4Q96DD7 RNA5SP325-201ENST00000363756 130 ntBASIC2.05□□□□□ -2.08
SHISA4Q96DD7 Y_RNA.426-201ENST00000384068 113 ntBASIC2.05□□□□□ -2.08
SHISA4Q96DD7 RNU6-42P-201ENST00000384165 107 ntBASIC2.05□□□□□ -2.08
SHISA4Q96DD7 MIR889-201ENST00000401280 79 ntBASIC2.05□□□□□ -2.08
SHISA4Q96DD7 Y_RNA.620-201ENST00000411009 88 ntBASIC2.05□□□□□ -2.08
SHISA4Q96DD7 HMGN2P19-201ENST00000425149 265 ntBASIC2.05□□□□□ -2.08
SHISA4Q96DD7 MIR4419B-201ENST00000577260 68 ntBASIC2.05□□□□□ -2.08
SHISA4Q96DD7 MIR4251-201ENST00000635819 61 ntBASIC2.05□□□□□ -2.08
SHISA4Q96DD7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SHISA4Q96DD7 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
SHISA4Q96DD7 Y_RNA.191-201ENST00000363972 113 ntBASIC2.04□□□□□ -2.08
SHISA4Q96DD7 RNU6-652P-201ENST00000365488 107 ntBASIC2.04□□□□□ -2.08
SHISA4Q96DD7 RNY1P4-201ENST00000384595 115 ntBASIC2.04□□□□□ -2.08
SHISA4Q96DD7 Y_RNA.567-201ENST00000384736 106 ntBASIC2.04□□□□□ -2.08
SHISA4Q96DD7 MIR548G-201ENST00000408442 89 ntBASIC2.04□□□□□ -2.08
SHISA4Q96DD7 SNORA31.25-201ENST00000517242 134 ntBASIC2.04□□□□□ -2.08
SHISA4Q96DD7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.04□□□□□ -2.08
SHISA4Q96DD7 MIR548AO-201ENST00000579992 96 ntBASIC2.04□□□□□ -2.08
SHISA4Q96DD7 MIR6779-201ENST00000617283 64 ntBASIC2.04□□□□□ -2.08
SHISA4Q96DD7 AC006160.2-201ENST00000637708 154 ntBASIC2.04□□□□□ -2.08
SHISA4Q96DD7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHISA4Q96DD7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SHISA4Q96DD7 RNU6-1307P-201ENST00000391012 103 ntBASIC2.03□□□□□ -2.08
SHISA4Q96DD7 RPL31P63-201ENST00000422565 375 ntBASIC2.03□□□□□ -2.08
SHISA4Q96DD7 SPINT5P-201ENST00000448174 155 ntBASIC2.03□□□□□ -2.08
SHISA4Q96DD7 RNU7-137P-201ENST00000516788 62 ntBASIC2.03□□□□□ -2.08
SHISA4Q96DD7 AC019288.1-201ENST00000557918 224 ntBASIC2.03□□□□□ -2.08
SHISA4Q96DD7 MIR4452-201ENST00000583004 71 ntBASIC2.03□□□□□ -2.08
SHISA4Q96DD7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SHISA4Q96DD7 Y_RNA.94-201ENST00000363068 106 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 SNORA16B-201ENST00000364674 135 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 RNU6-203P-201ENST00000384038 104 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 RNU6-1237P-201ENST00000384777 107 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 MIR653-201ENST00000385279 96 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 RNU6-1321P-201ENST00000390905 107 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 RNU6-788P-201ENST00000390967 104 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 RNA5SP237-201ENST00000410414 113 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 RNU7-48P-201ENST00000458875 63 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.02□□□□□ -2.09
SHISA4Q96DD7 AC055731.1-201ENST00000474387 401 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.02□□□□□ -2.09
SHISA4Q96DD7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.02□□□□□ -2.09
SHISA4Q96DD7 AC105081.1-201ENST00000617727 106 ntBASIC2.02□□□□□ -2.09
SHISA4Q96DD7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SHISA4Q96DD7 SNORD114-26-201ENST00000363543 72 ntBASIC2.01□□□□□ -2.09
SHISA4Q96DD7 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
SHISA4Q96DD7 AC073261.1-201ENST00000429409 121 ntBASIC2.01□□□□□ -2.09
SHISA4Q96DD7 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
SHISA4Q96DD7 MTND5P40-201ENST00000559945 246 ntBASIC2.01□□□□□ -2.09
SHISA4Q96DD7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.01□□□□□ -2.09
SHISA4Q96DD7 MIR4662A-201ENST00000637499 67 ntBASIC2.01□□□□□ -2.09
SHISA4Q96DD7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SHISA4Q96DD7 RNU6-1244P-201ENST00000363614 108 ntBASIC2□□□□□ -2.09
SHISA4Q96DD7 MIR194-1-201ENST00000384892 85 ntBASIC2□□□□□ -2.09
SHISA4Q96DD7 RNA5SP233-201ENST00000459153 113 ntBASIC2□□□□□ -2.09
SHISA4Q96DD7 RNA5SP102-201ENST00000516865 106 ntBASIC2□□□□□ -2.09
SHISA4Q96DD7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2□□□□□ -2.09
SHISA4Q96DD7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2□□□□□ -2.09
SHISA4Q96DD7 AP001362.1-201ENST00000625165 124 ntBASIC2□□□□□ -2.09
SHISA4Q96DD7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SHISA4Q96DD7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2□□□□□ -2.09
SHISA4Q96DD7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SHISA4Q96DD7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHISA4Q96DD7 RNU6-480P-201ENST00000384332 107 ntBASIC1.99□□□□□ -2.09
SHISA4Q96DD7 Y_RNA.609-201ENST00000410669 89 ntBASIC1.99□□□□□ -2.09
SHISA4Q96DD7 Y_RNA.611-201ENST00000410682 108 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms