Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-1076P-201ENST00000410397 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-355P-201ENST00000410427 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-791P-201ENST00000410467 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-705P-201ENST00000410601 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-1100P-201ENST00000410691 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-860P-201ENST00000410860 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-1217P-201ENST00000411276 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-785P-201ENST00000411324 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 U6.90-201ENST00000614007 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 U6.70-201ENST00000620287 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 MIR146A-201ENST00000385201 99 ntBASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 RNU4-69P-201ENST00000410677 143 ntBASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 RNU4-83P-201ENST00000410863 133 ntBASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 MTND4LP9-201ENST00000427694 174 ntBASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 RNU7-156P-201ENST00000517214 74 ntBASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CHMP4CQ96CF2 U8.15-201ENST00000390947 134 ntBASIC1.03□□□□□ -2.24
CHMP4CQ96CF2 SNORD77B-201ENST00000391112 67 ntBASIC1.03□□□□□ -2.24
CHMP4CQ96CF2 MIR3133-201ENST00000583157 78 ntBASIC1.03□□□□□ -2.24
CHMP4CQ96CF2 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.24
CHMP4CQ96CF2 AL589743.1-201ENST00000551932 2712 ntBASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 AL158147.1-201ENST00000443970 75 ntBASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 RNU7-56P-201ENST00000458744 62 ntBASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 RN7SKP19-201ENST00000516016 252 ntBASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 RNU6-403P-201ENST00000363163 104 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 SNORD114-2-201ENST00000363953 78 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6-746P-201ENST00000384112 109 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6-257P-201ENST00000410238 98 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU7-102P-201ENST00000458948 62 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6-351P-201ENST00000516097 100 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 AC022523.2-201ENST00000561045 150 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 AC011195.1-201ENST00000578177 177 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 MIR151B-201ENST00000584249 96 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6-774P-201ENST00000363238 107 ntBASIC1□□□□□ -2.25
CHMP4CQ96CF2 MIR539-201ENST00000365690 78 ntBASIC1□□□□□ -2.25
CHMP4CQ96CF2 MIR759-201ENST00000390224 91 ntBASIC1□□□□□ -2.25
CHMP4CQ96CF2 MIR1263-201ENST00000408324 86 ntBASIC1□□□□□ -2.25
CHMP4CQ96CF2 SNORD92-201ENST00000585078 85 ntBASIC1□□□□□ -2.25
CHMP4CQ96CF2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 Y_RNA.280-201ENST00000364765 112 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 SNORA72.6-201ENST00000384520 129 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 MIR605-201ENST00000385078 83 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 RNA5SP136-201ENST00000410906 107 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 PSMC1P5-201ENST00000512850 177 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 IGKV1-22-201ENST00000524313 326 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 FAM71BP1-201ENST00000604431 523 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 AC022709.1-201ENST00000615967 87 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 RNU6-235P-201ENST00000362644 107 ntBASIC0.98□□□□□ -2.25
CHMP4CQ96CF2 Y_RNA.213-201ENST00000364178 111 ntBASIC0.98□□□□□ -2.25
CHMP4CQ96CF2 Y_RNA.466-201ENST00000384294 113 ntBASIC0.98□□□□□ -2.25
CHMP4CQ96CF2 MIR573-201ENST00000384964 99 ntBASIC0.98□□□□□ -2.25
CHMP4CQ96CF2 RNU6-1211P-201ENST00000459179 105 ntBASIC0.98□□□□□ -2.25
CHMP4CQ96CF2 MIR613-201ENST00000385248 95 ntBASIC0.97□□□□□ -2.25
CHMP4CQ96CF2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.97□□□□□ -2.25
CHMP4CQ96CF2 RNU6-1061P-201ENST00000516530 99 ntBASIC0.97□□□□□ -2.25
CHMP4CQ96CF2 SNORD67.1-201ENST00000516618 108 ntBASIC0.97□□□□□ -2.25
CHMP4CQ96CF2 AC133485.1-201ENST00000567176 124 ntBASIC0.97□□□□□ -2.25
CHMP4CQ96CF2 SNORD114-10-201ENST00000363409 72 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 RNU6-1104P-201ENST00000384723 104 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 AC244098.3-201ENST00000424803 96 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 RNU7-137P-201ENST00000516788 62 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 CYP3A137P-201ENST00000562436 69 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 MIR4491-201ENST00000581087 68 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 AC008608.1-201ENST00000603910 127 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 MIR548M-201ENST00000408260 86 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 RNA5SP222-201ENST00000411039 105 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 DEFB131E-201ENST00000532329 154 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 AC090897.1-201ENST00000580909 226 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 MIR3163-201ENST00000581592 73 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 AC013244.2-201ENST00000603396 103 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 MIR6082-201ENST00000613604 109 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 MIR6866-201ENST00000638146 69 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 SNORD50.2-201ENST00000365465 70 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.540-201ENST00000384638 111 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.586-201ENST00000391146 98 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.588-201ENST00000391254 102 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 COX6CP6-201ENST00000490840 228 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 RNU7-6P-201ENST00000516845 62 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 MIR8066-201ENST00000617280 78 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 MIR6515-201ENST00000619843 57 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.198-201ENST00000364013 98 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 RNU6-110P-201ENST00000384508 104 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.528-201ENST00000384575 108 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 RNU6-781P-201ENST00000516377 101 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 RNU6-448P-201ENST00000517052 107 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms