Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 Y_RNA.213-201ENST00000364178 111 ntBASIC1.1□□□□□ -2.23
TRIM43Q96BQ3 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
TRIM43Q96BQ3 MIR532-201ENST00000385025 91 ntBASIC1.1□□□□□ -2.23
TRIM43Q96BQ3 SNORD89-201ENST00000390981 114 ntBASIC1.1□□□□□ -2.23
TRIM43Q96BQ3 SNORD77B-201ENST00000391112 67 ntBASIC1.1□□□□□ -2.23
TRIM43Q96BQ3 MIR1827-201ENST00000408549 66 ntBASIC1.1□□□□□ -2.23
TRIM43Q96BQ3 RNU4-69P-201ENST00000410677 143 ntBASIC1.1□□□□□ -2.23
TRIM43Q96BQ3 RNU7-79P-201ENST00000516082 62 ntBASIC1.1□□□□□ -2.23
TRIM43Q96BQ3 AC022523.2-201ENST00000561045 150 ntBASIC1.1□□□□□ -2.23
TRIM43Q96BQ3 RNU6-80P-201ENST00000384195 107 ntBASIC1.09□□□□□ -2.23
TRIM43Q96BQ3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.09□□□□□ -2.23
TRIM43Q96BQ3 U7.7-201ENST00000459276 60 ntBASIC1.09□□□□□ -2.23
TRIM43Q96BQ3 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
TRIM43Q96BQ3 PDCD5P2-201ENST00000507570 312 ntBASIC1.09□□□□□ -2.23
TRIM43Q96BQ3 RNU6-781P-201ENST00000516377 101 ntBASIC1.09□□□□□ -2.23
TRIM43Q96BQ3 RNU6-1110P-201ENST00000516462 101 ntBASIC1.09□□□□□ -2.23
TRIM43Q96BQ3 RNU7-35P-201ENST00000517174 62 ntBASIC1.09□□□□□ -2.23
TRIM43Q96BQ3 MIR6857-201ENST00000613267 93 ntBASIC1.09□□□□□ -2.23
TRIM43Q96BQ3 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
TRIM43Q96BQ3 Y_RNA.528-201ENST00000384575 108 ntBASIC1.08□□□□□ -2.24
TRIM43Q96BQ3 AC015818.7-201ENST00000428754 109 ntBASIC1.08□□□□□ -2.24
TRIM43Q96BQ3 AC087499.7-201ENST00000441958 109 ntBASIC1.08□□□□□ -2.24
TRIM43Q96BQ3 RNU7-185P-201ENST00000459215 60 ntBASIC1.08□□□□□ -2.24
TRIM43Q96BQ3 COX6CP6-201ENST00000490840 228 ntBASIC1.08□□□□□ -2.24
TRIM43Q96BQ3 UBL5P1-201ENST00000507979 193 ntBASIC1.08□□□□□ -2.24
TRIM43Q96BQ3 RNU6-772P-201ENST00000516042 105 ntBASIC1.08□□□□□ -2.24
TRIM43Q96BQ3 RNU6-977P-201ENST00000516411 103 ntBASIC1.08□□□□□ -2.24
TRIM43Q96BQ3 AC025166.1-201ENST00000612411 163 ntBASIC1.08□□□□□ -2.24
TRIM43Q96BQ3 Y_RNA.198-201ENST00000364013 98 ntBASIC1.07□□□□□ -2.24
TRIM43Q96BQ3 SNORD58C-201ENST00000365223 64 ntBASIC1.07□□□□□ -2.24
TRIM43Q96BQ3 RNU6-949P-201ENST00000384040 107 ntBASIC1.07□□□□□ -2.24
TRIM43Q96BQ3 SNORD93-201ENST00000408813 74 ntBASIC1.07□□□□□ -2.24
TRIM43Q96BQ3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.07□□□□□ -2.24
TRIM43Q96BQ3 MIR3163-201ENST00000581592 73 ntBASIC1.07□□□□□ -2.24
TRIM43Q96BQ3 AC025627.3-201ENST00000582078 182 ntBASIC1.07□□□□□ -2.24
TRIM43Q96BQ3 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
TRIM43Q96BQ3 RNY1P13-201ENST00000365030 105 ntBASIC1.06□□□□□ -2.24
TRIM43Q96BQ3 SNORA22-201ENST00000383907 134 ntBASIC1.06□□□□□ -2.24
TRIM43Q96BQ3 SNORA22C-201ENST00000384614 134 ntBASIC1.06□□□□□ -2.24
TRIM43Q96BQ3 RNU6-1104P-201ENST00000384723 104 ntBASIC1.06□□□□□ -2.24
TRIM43Q96BQ3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.06□□□□□ -2.24
TRIM43Q96BQ3 RNU6-1234P-201ENST00000516877 103 ntBASIC1.06□□□□□ -2.24
TRIM43Q96BQ3 MIR4698-201ENST00000577795 80 ntBASIC1.06□□□□□ -2.24
TRIM43Q96BQ3 MIR4676-201ENST00000583078 72 ntBASIC1.06□□□□□ -2.24
TRIM43Q96BQ3 Y_RNA.71-201ENST00000362892 104 ntBASIC1.05□□□□□ -2.24
TRIM43Q96BQ3 Y_RNA.346-201ENST00000365385 112 ntBASIC1.05□□□□□ -2.24
TRIM43Q96BQ3 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
TRIM43Q96BQ3 RNU7-107P-201ENST00000459121 61 ntBASIC1.05□□□□□ -2.24
TRIM43Q96BQ3 RNA5SP255-201ENST00000516370 107 ntBASIC1.05□□□□□ -2.24
TRIM43Q96BQ3 MIR4714-201ENST00000580728 77 ntBASIC1.05□□□□□ -2.24
TRIM43Q96BQ3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.05□□□□□ -2.24
TRIM43Q96BQ3 AL589743.1-201ENST00000551932 2712 ntBASIC1.05□□□□□ -2.24
TRIM43Q96BQ3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 AL157777.2-201ENST00000258070 137 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 RNU6-81P-201ENST00000365608 104 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 RNU6-364P-201ENST00000384387 107 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 MIR520F-201ENST00000384824 87 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 MIR193B-201ENST00000384907 83 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 MIR125B2-201ENST00000385128 89 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 MIR938-201ENST00000401216 83 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 RNU7-6P-201ENST00000516845 62 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 MIR3910-1-201ENST00000580936 111 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 AC020891.4-201ENST00000605745 93 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 AC132825.6-201ENST00000638861 357 ntBASIC1.04□□□□□ -2.24
TRIM43Q96BQ3 RNU6-369P-201ENST00000362515 102 ntBASIC1.03□□□□□ -2.24
TRIM43Q96BQ3 Y_RNA.218-201ENST00000364218 104 ntBASIC1.03□□□□□ -2.24
TRIM43Q96BQ3 RNU1-36P-201ENST00000365130 165 ntBASIC1.03□□□□□ -2.24
TRIM43Q96BQ3 RNU6-959P-201ENST00000384671 107 ntBASIC1.03□□□□□ -2.24
TRIM43Q96BQ3 U8.15-201ENST00000390947 134 ntBASIC1.03□□□□□ -2.24
TRIM43Q96BQ3 MIR1273G-201ENST00000577677 100 ntBASIC1.03□□□□□ -2.24
TRIM43Q96BQ3 MIR4804-201ENST00000581683 73 ntBASIC1.03□□□□□ -2.24
TRIM43Q96BQ3 FAM71BP1-201ENST00000604431 523 ntBASIC1.03□□□□□ -2.24
TRIM43Q96BQ3 MTND5P18-201ENST00000445624 1801 ntBASIC1.03□□□□□ -2.25
TRIM43Q96BQ3 SNORD116-14-201ENST00000383894 92 ntBASIC1.02□□□□□ -2.25
TRIM43Q96BQ3 SNORD116-17-201ENST00000383929 92 ntBASIC1.02□□□□□ -2.25
TRIM43Q96BQ3 SNORD116-15-201ENST00000384445 92 ntBASIC1.02□□□□□ -2.25
TRIM43Q96BQ3 SNORD116-19-201ENST00000384729 92 ntBASIC1.02□□□□□ -2.25
TRIM43Q96BQ3 MIRLET7F2-201ENST00000385277 83 ntBASIC1.02□□□□□ -2.25
TRIM43Q96BQ3 SNORD105-201ENST00000386910 85 ntBASIC1.02□□□□□ -2.25
TRIM43Q96BQ3 RNU4-83P-201ENST00000410863 133 ntBASIC1.02□□□□□ -2.25
TRIM43Q96BQ3 SNORD67.1-201ENST00000516618 108 ntBASIC1.02□□□□□ -2.25
TRIM43Q96BQ3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
TRIM43Q96BQ3 SNORD114-10-201ENST00000363409 72 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU6-447P-201ENST00000410293 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU6-355P-201ENST00000410427 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU6-791P-201ENST00000410467 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU6-705P-201ENST00000410601 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU6-860P-201ENST00000410860 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU6-785P-201ENST00000411324 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 Y_RNA.712-201ENST00000517011 92 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 RNU7-156P-201ENST00000517214 74 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 U6.90-201ENST00000614007 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 U6.70-201ENST00000620287 104 ntBASIC1.01□□□□□ -2.25
TRIM43Q96BQ3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
TRIM43Q96BQ3 RNU6-403P-201ENST00000363163 104 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 248.9 ms