Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RNA5SP261-201ENST00000410536 106 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 RPS3AP1-201ENST00000413190 320 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 RNU6-537P-201ENST00000517277 103 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 AC068339.1-201ENST00000526965 141 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 AL162726.3-218ENST00000636401 95 ntBASIC1.3□□□□□ -2.2
ATP2A3Q93084 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ATP2A3Q93084 AL589743.1-201ENST00000551932 2712 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
ATP2A3Q93084 RNU4-69P-201ENST00000410677 143 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 AC244023.1-201ENST00000426884 112 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 AL031737.1-201ENST00000450125 223 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 RNU6-168P-201ENST00000516189 101 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 RNU6-412P-201ENST00000516434 106 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 RNA5SP404-201ENST00000517118 132 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 SNORA70.22-201ENST00000517160 124 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 MIR5009-201ENST00000578736 100 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 AC242498.1-201ENST00000604134 111 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 PRELID3BP2-201ENST00000605362 201 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 RNU6-94P-201ENST00000607728 107 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 uc_338.6-201ENST00000613544 171 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 MIR6779-201ENST00000617283 64 ntBASIC1.29□□□□□ -2.2
ATP2A3Q93084 SNORA18-201ENST00000384416 132 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 MIR605-201ENST00000385078 83 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 RNU6-816P-201ENST00000390914 107 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 RNU6-1268P-201ENST00000391214 107 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 RNU6-1239P-201ENST00000391310 107 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 MIR1185-1-201ENST00000408598 86 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.28□□□□□ -2.2
ATP2A3Q93084 RNU6-109P-201ENST00000516364 107 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 RNU6-184P-201ENST00000516514 107 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 RNU11-2P-201ENST00000516898 142 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 AP003716.2-201ENST00000528260 108 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 MIR3152-201ENST00000579801 74 ntBASIC1.28□□□□□ -2.2
ATP2A3Q93084 RNU6-654P-201ENST00000364373 107 ntBASIC1.27□□□□□ -2.21
ATP2A3Q93084 RNU6-396P-201ENST00000365369 105 ntBASIC1.27□□□□□ -2.21
ATP2A3Q93084 Y_RNA.495-201ENST00000384435 112 ntBASIC1.27□□□□□ -2.21
ATP2A3Q93084 MIR590-201ENST00000385008 97 ntBASIC1.27□□□□□ -2.21
ATP2A3Q93084 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
ATP2A3Q93084 RNU6-679P-201ENST00000391003 106 ntBASIC1.27□□□□□ -2.21
ATP2A3Q93084 MIR2115-201ENST00000516657 100 ntBASIC1.27□□□□□ -2.21
ATP2A3Q93084 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
ATP2A3Q93084 RNU6-766P-201ENST00000362478 107 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 RNU6-640P-201ENST00000363693 105 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 Y_RNA.348-201ENST00000365403 103 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 RNU6-756P-201ENST00000383997 107 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 SNORA51.5-201ENST00000384126 131 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 MIR759-201ENST00000390224 91 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 RNA5SP95-201ENST00000410319 137 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 RPL39P25-201ENST00000449384 154 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 RNU7-35P-201ENST00000517174 62 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 MIR6740-201ENST00000618268 113 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
ATP2A3Q93084 Y_RNA.49-201ENST00000362714 112 ntBASIC1.25□□□□□ -2.21
ATP2A3Q93084 RNU4-67P-201ENST00000364569 141 ntBASIC1.25□□□□□ -2.21
ATP2A3Q93084 RNU6-905P-201ENST00000384434 107 ntBASIC1.25□□□□□ -2.21
ATP2A3Q93084 RNU6-1237P-201ENST00000384777 107 ntBASIC1.25□□□□□ -2.21
ATP2A3Q93084 MIR577-201ENST00000385196 96 ntBASIC1.25□□□□□ -2.21
ATP2A3Q93084 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.25□□□□□ -2.21
ATP2A3Q93084 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.25□□□□□ -2.21
ATP2A3Q93084 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.25□□□□□ -2.21
ATP2A3Q93084 AC141557.1-201ENST00000540982 400 ntBASIC1.25□□□□□ -2.21
ATP2A3Q93084 AC022709.1-201ENST00000615967 87 ntBASIC1.25□□□□□ -2.21
ATP2A3Q93084 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
ATP2A3Q93084 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
ATP2A3Q93084 RNU6-363P-201ENST00000362895 105 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 Y_RNA.309-201ENST00000365046 111 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 Y_RNA.354-201ENST00000365448 111 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 Y_RNA.360-201ENST00000365512 102 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 RNU6-32P-201ENST00000383948 107 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 RNU6-13P-201ENST00000384248 107 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 SNORA80D-201ENST00000384488 135 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 RNU6-12P-201ENST00000384604 107 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 SNORD38B-201ENST00000384690 67 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 RNU6-41P-201ENST00000384741 107 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 RNU6-205P-201ENST00000390858 107 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 SNORA7.5-201ENST00000410672 110 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 RNU6-893P-201ENST00000458841 100 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 RNU6-904P-201ENST00000516206 101 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 SNORD67.1-201ENST00000516618 108 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 MIR548Z-201ENST00000584743 97 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 SNORD38B-202ENST00000625943 69 ntBASIC1.24□□□□□ -2.21
ATP2A3Q93084 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
ATP2A3Q93084 Y_RNA.247-201ENST00000364500 92 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 Y_RNA.299-201ENST00000364973 94 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 RNY1P13-201ENST00000365030 105 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 Y_RNA.330-201ENST00000365230 109 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 Y_RNA.363-201ENST00000365529 113 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 MIR598-201ENST00000384868 97 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 MIR206-201ENST00000384872 86 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 UBL5P1-201ENST00000507979 193 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 RNU6-521P-201ENST00000516663 105 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 AP000753.3-201ENST00000604083 169 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 SEPT14P17-201ENST00000617978 177 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 MIR6516-201ENST00000630554 81 ntBASIC1.23□□□□□ -2.21
ATP2A3Q93084 AC091304.10-201ENST00000641554 121 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms