Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORD81.1-201ENST00000363064 77 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 MIR626-201ENST00000385032 94 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-365P-201ENST00000517113 106 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-708P-201ENST00000384217 107 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 AC069503.3-201ENST00000618674 145 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 SNORD115-25-201ENST00000362619 82 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 MIR526A2-201ENST00000390198 65 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 AC016907.1-201ENST00000419483 435 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-720P-201ENST00000516363 108 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 MIR3611-201ENST00000584484 83 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 AC021146.6-201ENST00000514659 117 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU7-35P-201ENST00000517174 62 ntBASIC-0.21□□□□□ -2.44
SYNE1Q8NF91 RNU6-154P-201ENST00000384306 106 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 SNORA18-201ENST00000384416 132 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 MTND1P1-201ENST00000445453 368 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU6-453P-201ENST00000516819 85 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU6-175P-201ENST00000516896 107 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 AC026421.1-201ENST00000519101 163 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU7-10P-201ENST00000607194 63 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 AC084781.2-201ENST00000615568 161 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU6-890P-201ENST00000384121 107 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 MTCO2P24-201ENST00000515611 426 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 PISRT1.1-201ENST00000616930 107 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 SNORA53-201ENST00000391141 249 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 AC098614.3-201ENST00000438957 440 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 MIR1270-201ENST00000459320 83 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 SNORA40.14-201ENST00000516543 86 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU7-70P-201ENST00000516941 66 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU6-699P-201ENST00000517081 110 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 SNORD114-4-201ENST00000363962 75 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 SNORD115-46-201ENST00000390982 71 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 AL160004.2-201ENST00000432935 350 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 MTND4LP30-201ENST00000454092 297 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU7-104P-201ENST00000459398 79 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNA5SP470-201ENST00000516463 106 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 AC006504.6-201ENST00000590142 199 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 SNORD38.2-201ENST00000384470 69 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 AC096644.2-201ENST00000429278 159 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 SNORD22.1-201ENST00000516331 125 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 SNORA27.4-201ENST00000516650 95 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU6-881P-201ENST00000516813 102 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 MIR4760-201ENST00000585040 80 ntBASIC-0.22□□□□□ -2.44
SYNE1Q8NF91 RNU6-103P-201ENST00000363686 107 ntBASIC-0.22□□□□□ -2.45
SYNE1Q8NF91 AL121914.1-201ENST00000450188 156 ntBASIC-0.22□□□□□ -2.45
SYNE1Q8NF91 AC082651.2-201ENST00000496833 166 ntBASIC-0.22□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.22□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.22□□□□□ -2.45
SYNE1Q8NF91 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.22□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.22□□□□□ -2.45
SYNE1Q8NF91 AP000676.1-201ENST00000533307 52 ntBASIC-0.22□□□□□ -2.45
SYNE1Q8NF91 SNORD58B-201ENST00000607313 66 ntBASIC-0.22□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNY1P13-201ENST00000365030 105 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNU6-662P-201ENST00000384253 104 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 MIR559-201ENST00000385188 96 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 RNU7-55P-201ENST00000459426 62 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 AL138825.1-201ENST00000618587 192 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 snoR1.1-201ENST00000628177 80 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 MTND5P18-201ENST00000445624 1801 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 SNORD64-201ENST00000386683 67 ntBASIC-0.23□□□□□ -2.45
SYNE1Q8NF91 SNORD18.2-201ENST00000459604 70 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms