Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 SNORD118-201ENST00000363593 134 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.251-201ENST00000364551 99 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.366-201ENST00000365540 102 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.441-201ENST00000384123 112 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.531-201ENST00000384589 121 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 Y_RNA.536-201ENST00000384621 113 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 MIR548J-201ENST00000408833 112 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 MIR1270-201ENST00000459320 83 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 SNORA25.12-201ENST00000516202 82 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 AL359881.1-201ENST00000602916 267 ntBASIC0.35□□□□□ -2.35
CCDC63Q8NA47 MIR103A1-201ENST00000362165 78 ntBASIC0.34□□□□□ -2.36
CCDC63Q8NA47 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
CCDC63Q8NA47 RNU6-1318P-201ENST00000365389 103 ntBASIC0.34□□□□□ -2.36
CCDC63Q8NA47 MTATP6P21-201ENST00000440681 189 ntBASIC0.34□□□□□ -2.36
CCDC63Q8NA47 RNU7-137P-201ENST00000516788 62 ntBASIC0.34□□□□□ -2.36
CCDC63Q8NA47 AC138907.4-201ENST00000570107 226 ntBASIC0.34□□□□□ -2.36
CCDC63Q8NA47 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.34□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.476-201ENST00000384347 108 ntBASIC0.33□□□□□ -2.36
CCDC63Q8NA47 MIR216A-201ENST00000385063 110 ntBASIC0.33□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.686-201ENST00000516548 134 ntBASIC0.33□□□□□ -2.36
CCDC63Q8NA47 SNORD67.1-201ENST00000516618 108 ntBASIC0.33□□□□□ -2.36
CCDC63Q8NA47 AL078603.1-201ENST00000603824 313 ntBASIC0.33□□□□□ -2.36
CCDC63Q8NA47 AC021443.1-201ENST00000604478 211 ntBASIC0.33□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.174-201ENST00000363781 105 ntBASIC0.32□□□□□ -2.36
CCDC63Q8NA47 RNU6-309P-201ENST00000364573 106 ntBASIC0.32□□□□□ -2.36
CCDC63Q8NA47 RNU6-535P-201ENST00000384722 107 ntBASIC0.32□□□□□ -2.36
CCDC63Q8NA47 snosnR66.1-201ENST00000391095 99 ntBASIC0.32□□□□□ -2.36
CCDC63Q8NA47 SNORD71-201ENST00000411292 86 ntBASIC0.32□□□□□ -2.36
CCDC63Q8NA47 RNU7-164P-201ENST00000459221 62 ntBASIC0.32□□□□□ -2.36
CCDC63Q8NA47 RNU7-123P-201ENST00000515911 60 ntBASIC0.32□□□□□ -2.36
CCDC63Q8NA47 RNU6-531P-201ENST00000516694 104 ntBASIC0.32□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.697-201ENST00000516776 113 ntBASIC0.32□□□□□ -2.36
CCDC63Q8NA47 RNA5SP133-201ENST00000363368 119 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 SNORD37.2-201ENST00000391075 66 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.584-201ENST00000391090 114 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 RNU6-1135P-201ENST00000411083 103 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 AC074198.2-201ENST00000508153 258 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.662-201ENST00000516028 97 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 RNU6-469P-201ENST00000516253 101 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.700-201ENST00000516806 100 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 RNU6-1223P-201ENST00000517124 104 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 AC138749.4-201ENST00000563970 127 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 AC243829.3-201ENST00000622177 108 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 U6.109-201ENST00000636749 87 ntBASIC0.31□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.4-201ENST00000362333 112 ntBASIC0.3□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.29-201ENST00000362570 113 ntBASIC0.3□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.272-201ENST00000364696 102 ntBASIC0.3□□□□□ -2.36
CCDC63Q8NA47 MIR499A-201ENST00000384903 122 ntBASIC0.3□□□□□ -2.36
CCDC63Q8NA47 AL603914.1-201ENST00000401964 204 ntBASIC0.3□□□□□ -2.36
CCDC63Q8NA47 SNRPGP12-201ENST00000449481 213 ntBASIC0.3□□□□□ -2.36
CCDC63Q8NA47 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
CCDC63Q8NA47 RNU6-1194P-201ENST00000516208 104 ntBASIC0.3□□□□□ -2.36
CCDC63Q8NA47 SNORA81.3-201ENST00000517283 198 ntBASIC0.3□□□□□ -2.36
CCDC63Q8NA47 AC022523.2-201ENST00000561045 150 ntBASIC0.3□□□□□ -2.36
CCDC63Q8NA47 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
CCDC63Q8NA47 SNORD114-10-201ENST00000363409 72 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.164-201ENST00000363709 102 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 RNA5SP245-201ENST00000364239 121 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.257-201ENST00000364596 102 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.785-201ENST00000384290 109 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 RNU7-197P-201ENST00000458836 62 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.690-201ENST00000516603 95 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 RNA5SP268-201ENST00000516828 124 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 MIR3124-201ENST00000582636 67 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 AC004792.1-201ENST00000614523 137 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 MIR6513-201ENST00000621188 64 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 MIR6828-201ENST00000636181 60 ntBASIC0.29□□□□□ -2.36
CCDC63Q8NA47 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC63Q8NA47 RNU4-58P-201ENST00000363192 141 ntBASIC0.28□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.224-201ENST00000364308 111 ntBASIC0.28□□□□□ -2.36
CCDC63Q8NA47 Y_RNA.298-201ENST00000364960 107 ntBASIC0.28□□□□□ -2.36
CCDC63Q8NA47 RNA5SP47-201ENST00000517230 109 ntBASIC0.28□□□□□ -2.36
CCDC63Q8NA47 DEFB131E-201ENST00000532329 154 ntBASIC0.28□□□□□ -2.36
CCDC63Q8NA47 AC112693.2-201ENST00000556538 232 ntBASIC0.28□□□□□ -2.36
CCDC63Q8NA47 AC108081.1-201ENST00000604358 221 ntBASIC0.28□□□□□ -2.36
CCDC63Q8NA47 AC105081.1-201ENST00000617727 106 ntBASIC0.28□□□□□ -2.36
CCDC63Q8NA47 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.28□□□□□ -2.36
CCDC63Q8NA47 RNU4-11P-201ENST00000365287 132 ntBASIC0.27□□□□□ -2.37
CCDC63Q8NA47 SNORD18B-201ENST00000365659 72 ntBASIC0.27□□□□□ -2.37
CCDC63Q8NA47 SNORD28-201ENST00000384706 75 ntBASIC0.27□□□□□ -2.37
CCDC63Q8NA47 RNU4-69P-201ENST00000410677 143 ntBASIC0.27□□□□□ -2.37
CCDC63Q8NA47 SUMO1P3-201ENST00000439961 304 ntBASIC0.27□□□□□ -2.37
CCDC63Q8NA47 RNU6-135P-201ENST00000516769 101 ntBASIC0.27□□□□□ -2.37
CCDC63Q8NA47 SCARNA16.5-201ENST00000517114 183 ntBASIC0.27□□□□□ -2.37
CCDC63Q8NA47 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.27□□□□□ -2.37
CCDC63Q8NA47 AC098479.1-201ENST00000609225 154 ntBASIC0.27□□□□□ -2.37
CCDC63Q8NA47 MIR7107-201ENST00000611489 80 ntBASIC0.27□□□□□ -2.37
CCDC63Q8NA47 Y_RNA.119-201ENST00000363301 96 ntBASIC0.26□□□□□ -2.37
CCDC63Q8NA47 SNORA63.5-201ENST00000363548 123 ntBASIC0.26□□□□□ -2.37
CCDC63Q8NA47 RNA5SP247-201ENST00000411181 105 ntBASIC0.26□□□□□ -2.37
CCDC63Q8NA47 RNU6-863P-201ENST00000515989 104 ntBASIC0.26□□□□□ -2.37
CCDC63Q8NA47 RNA5SP220-201ENST00000516298 104 ntBASIC0.26□□□□□ -2.37
CCDC63Q8NA47 MIR4639-201ENST00000584938 69 ntBASIC0.26□□□□□ -2.37
CCDC63Q8NA47 RNU6-1130P-201ENST00000365434 107 ntBASIC0.25□□□□□ -2.37
CCDC63Q8NA47 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms