Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MIR4771-2-201ENST00000577758 74 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 MIR4771-1-201ENST00000582617 74 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 MIR548AE2-201ENST00000583456 67 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 AC020891.4-201ENST00000605745 93 ntBASIC0.95□□□□□ -2.26
VPS52Q8N1B4 Y_RNA.299-201ENST00000364973 94 ntBASIC0.94□□□□□ -2.26
VPS52Q8N1B4 RNY1P13-201ENST00000365030 105 ntBASIC0.94□□□□□ -2.26
VPS52Q8N1B4 SNORD89-201ENST00000390981 114 ntBASIC0.94□□□□□ -2.26
VPS52Q8N1B4 AC025627.3-201ENST00000582078 182 ntBASIC0.94□□□□□ -2.26
VPS52Q8N1B4 MIR4676-201ENST00000583078 72 ntBASIC0.94□□□□□ -2.26
VPS52Q8N1B4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.94□□□□□ -2.26
VPS52Q8N1B4 MIR6779-201ENST00000617283 64 ntBASIC0.94□□□□□ -2.26
VPS52Q8N1B4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VPS52Q8N1B4 HSBP1P2-201ENST00000299671 229 ntBASIC0.93□□□□□ -2.26
VPS52Q8N1B4 MIR539-201ENST00000365690 78 ntBASIC0.93□□□□□ -2.26
VPS52Q8N1B4 MIR100-201ENST00000385259 80 ntBASIC0.93□□□□□ -2.26
VPS52Q8N1B4 MIRLET7F2-201ENST00000385277 83 ntBASIC0.93□□□□□ -2.26
VPS52Q8N1B4 AC096949.1-201ENST00000412047 152 ntBASIC0.93□□□□□ -2.26
VPS52Q8N1B4 MIR1270-201ENST00000459320 83 ntBASIC0.93□□□□□ -2.26
VPS52Q8N1B4 MIR4804-201ENST00000581683 73 ntBASIC0.93□□□□□ -2.26
VPS52Q8N1B4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.93□□□□□ -2.26
VPS52Q8N1B4 MIR125B2-201ENST00000385128 89 ntBASIC0.92□□□□□ -2.26
VPS52Q8N1B4 U8.15-201ENST00000390947 134 ntBASIC0.92□□□□□ -2.26
VPS52Q8N1B4 MIR1257-201ENST00000408490 117 ntBASIC0.92□□□□□ -2.26
VPS52Q8N1B4 RNU4-69P-201ENST00000410677 143 ntBASIC0.92□□□□□ -2.26
VPS52Q8N1B4 RNA5SP136-201ENST00000410906 107 ntBASIC0.92□□□□□ -2.26
VPS52Q8N1B4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.92□□□□□ -2.26
VPS52Q8N1B4 RNU7-79P-201ENST00000516082 62 ntBASIC0.92□□□□□ -2.26
VPS52Q8N1B4 AC022523.2-201ENST00000561045 150 ntBASIC0.92□□□□□ -2.26
VPS52Q8N1B4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
VPS52Q8N1B4 AC023934.1-201ENST00000574529 2389 ntBASIC0.92□□□□□ -2.26
VPS52Q8N1B4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.91□□□□□ -2.26
VPS52Q8N1B4 RNU6-1104P-201ENST00000384723 104 ntBASIC0.91□□□□□ -2.26
VPS52Q8N1B4 SNORD105-201ENST00000386910 85 ntBASIC0.91□□□□□ -2.26
VPS52Q8N1B4 AC015818.7-201ENST00000428754 109 ntBASIC0.91□□□□□ -2.26
VPS52Q8N1B4 SUMO1P3-201ENST00000439961 304 ntBASIC0.91□□□□□ -2.26
VPS52Q8N1B4 AC087499.7-201ENST00000441958 109 ntBASIC0.91□□□□□ -2.26
VPS52Q8N1B4 RNU6-977P-201ENST00000516411 103 ntBASIC0.91□□□□□ -2.26
VPS52Q8N1B4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
VPS52Q8N1B4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
VPS52Q8N1B4 RNU7-56P-201ENST00000458744 62 ntBASIC0.9□□□□□ -2.27
VPS52Q8N1B4 COX6CP6-201ENST00000490840 228 ntBASIC0.9□□□□□ -2.27
VPS52Q8N1B4 ACA64.5-201ENST00000516207 127 ntBASIC0.9□□□□□ -2.27
VPS52Q8N1B4 RNU6-781P-201ENST00000516377 101 ntBASIC0.9□□□□□ -2.27
VPS52Q8N1B4 SNORD92-201ENST00000585078 85 ntBASIC0.9□□□□□ -2.27
VPS52Q8N1B4 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
VPS52Q8N1B4 FAM71BP1-201ENST00000604431 523 ntBASIC0.9□□□□□ -2.27
VPS52Q8N1B4 RNU6-235P-201ENST00000362644 107 ntBASIC0.89□□□□□ -2.27
VPS52Q8N1B4 SNORA32-201ENST00000384072 121 ntBASIC0.89□□□□□ -2.27
VPS52Q8N1B4 MIR938-201ENST00000401216 83 ntBASIC0.89□□□□□ -2.27
VPS52Q8N1B4 AC004941.2-201ENST00000427009 228 ntBASIC0.89□□□□□ -2.27
VPS52Q8N1B4 RNU6-971P-201ENST00000516920 106 ntBASIC0.89□□□□□ -2.27
VPS52Q8N1B4 MIR4714-201ENST00000580728 77 ntBASIC0.89□□□□□ -2.27
VPS52Q8N1B4 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
VPS52Q8N1B4 Y_RNA.198-201ENST00000364013 98 ntBASIC0.88□□□□□ -2.27
VPS52Q8N1B4 SNORD58C-201ENST00000365223 64 ntBASIC0.88□□□□□ -2.27
VPS52Q8N1B4 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
VPS52Q8N1B4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.88□□□□□ -2.27
VPS52Q8N1B4 AL603908.1-201ENST00000406098 201 ntBASIC0.88□□□□□ -2.27
VPS52Q8N1B4 RNU6-1211P-201ENST00000459179 105 ntBASIC0.88□□□□□ -2.27
VPS52Q8N1B4 AL353765.1-201ENST00000605514 183 ntBASIC0.88□□□□□ -2.27
VPS52Q8N1B4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
VPS52Q8N1B4 RNU6-80P-201ENST00000384195 107 ntBASIC0.87□□□□□ -2.27
VPS52Q8N1B4 MIR520F-201ENST00000384824 87 ntBASIC0.87□□□□□ -2.27
VPS52Q8N1B4 MT-TI-201ENST00000387365 69 ntBASIC0.87□□□□□ -2.27
VPS52Q8N1B4 SNORD93-201ENST00000408813 74 ntBASIC0.87□□□□□ -2.27
VPS52Q8N1B4 RPL39P25-201ENST00000449384 154 ntBASIC0.87□□□□□ -2.27
VPS52Q8N1B4 RNU7-137P-201ENST00000516788 62 ntBASIC0.87□□□□□ -2.27
VPS52Q8N1B4 AL359881.1-201ENST00000602916 267 ntBASIC0.87□□□□□ -2.27
VPS52Q8N1B4 MIR8066-201ENST00000617280 78 ntBASIC0.87□□□□□ -2.27
VPS52Q8N1B4 SNORD114-10-201ENST00000363409 72 ntBASIC0.86□□□□□ -2.27
VPS52Q8N1B4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
VPS52Q8N1B4 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
VPS52Q8N1B4 MIR1263-201ENST00000408324 86 ntBASIC0.86□□□□□ -2.27
VPS52Q8N1B4 RNU6-772P-201ENST00000516042 105 ntBASIC0.86□□□□□ -2.27
VPS52Q8N1B4 SNORD67.1-201ENST00000516618 108 ntBASIC0.86□□□□□ -2.27
VPS52Q8N1B4 RNU7-156P-201ENST00000517214 74 ntBASIC0.86□□□□□ -2.27
VPS52Q8N1B4 RN7SL793P-201ENST00000583259 296 ntBASIC0.86□□□□□ -2.27
VPS52Q8N1B4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.86□□□□□ -2.27
VPS52Q8N1B4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 RNA5SP325-201ENST00000363756 130 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 Y_RNA.213-201ENST00000364178 111 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 Y_RNA.218-201ENST00000364218 104 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 RNU6-81P-201ENST00000365608 104 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 Y_RNA.528-201ENST00000384575 108 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 MIR216A-201ENST00000385063 110 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 SNORD77B-201ENST00000391112 67 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 RNU1-119P-201ENST00000391122 165 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 MIR4491-201ENST00000581087 68 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 MIR3163-201ENST00000581592 73 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 AC087741.2-201ENST00000619415 172 ntBASIC0.85□□□□□ -2.27
VPS52Q8N1B4 SNORD115-19-201ENST00000363098 82 ntBASIC0.84□□□□□ -2.27
VPS52Q8N1B4 SNORD115-18-201ENST00000363293 82 ntBASIC0.84□□□□□ -2.27
VPS52Q8N1B4 SNORD115-17-201ENST00000364612 82 ntBASIC0.84□□□□□ -2.27
VPS52Q8N1B4 RNU6-364P-201ENST00000384387 107 ntBASIC0.84□□□□□ -2.27
VPS52Q8N1B4 MIR520H-201ENST00000385126 88 ntBASIC0.84□□□□□ -2.27
VPS52Q8N1B4 SNORD99-201ENST00000408612 74 ntBASIC0.84□□□□□ -2.27
VPS52Q8N1B4 RNU6-447P-201ENST00000410293 104 ntBASIC0.84□□□□□ -2.27
VPS52Q8N1B4 RNU6-1118P-201ENST00000410382 104 ntBASIC0.84□□□□□ -2.27
VPS52Q8N1B4 RNU6-1076P-201ENST00000410397 104 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms