Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 AC006504.6-201ENST00000590142 199 ntBASIC-1.03□□□□□ -2.57
SSX8Q7RTT4 AC104985.2-201ENST00000620598 500 ntBASIC-1.03□□□□□ -2.57
SSX8Q7RTT4 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 MIR204-201ENST00000385200 110 ntBASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 SNORD115-46-201ENST00000390982 71 ntBASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 AL606845.1-201ENST00000404881 255 ntBASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 AC021146.6-201ENST00000514659 117 ntBASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 RNU6-570P-201ENST00000517051 105 ntBASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 MIR4500-201ENST00000579472 76 ntBASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 MTND4LP32-201ENST00000636111 270 ntBASIC-1.04□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.05□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.05□□□□□ -2.58
SSX8Q7RTT4 SNORD81.2-201ENST00000365153 76 ntBASIC-1.05□□□□□ -2.58
SSX8Q7RTT4 MIR519E-201ENST00000385075 84 ntBASIC-1.05□□□□□ -2.58
SSX8Q7RTT4 MIR548I2-201ENST00000408348 149 ntBASIC-1.05□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.05□□□□□ -2.58
SSX8Q7RTT4 SNORA27.4-201ENST00000516650 95 ntBASIC-1.05□□□□□ -2.58
SSX8Q7RTT4 MIR548AX-201ENST00000580117 73 ntBASIC-1.05□□□□□ -2.58
SSX8Q7RTT4 MIR548AE1-201ENST00000583292 70 ntBASIC-1.05□□□□□ -2.58
SSX8Q7RTT4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.05□□□□□ -2.58
SSX8Q7RTT4 SNORA25.1-201ENST00000362326 128 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 RNU6-154P-201ENST00000384306 106 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 RNU6-900P-201ENST00000384498 102 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 SNORD116-29-201ENST00000384516 83 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 MIR617-201ENST00000385030 97 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 RNY4P36-201ENST00000391116 96 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 AL445193.1-201ENST00000441183 141 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 RNU7-195P-201ENST00000458793 62 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 IGKV1-22-201ENST00000524313 326 ntBASIC-1.06□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 RNU6-290P-201ENST00000365212 101 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 RNU6-326P-201ENST00000365480 107 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 RNY1P6-201ENST00000384193 109 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 SNORD116-2-201ENST00000384274 95 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 SNORD116-6-201ENST00000384711 96 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 AC082651.2-201ENST00000496833 166 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 SCARNA17-201ENST00000516183 144 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 MIR548AG2-201ENST00000581228 64 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 MIR4280-201ENST00000582178 76 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 MIR548AE2-201ENST00000583456 67 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 AC084782.3-201ENST00000612282 578 ntBASIC-1.07□□□□□ -2.58
SSX8Q7RTT4 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.08□□□□□ -2.58
SSX8Q7RTT4 RNU6-211P-201ENST00000384047 107 ntBASIC-1.08□□□□□ -2.58
SSX8Q7RTT4 RNU6-524P-201ENST00000384270 107 ntBASIC-1.08□□□□□ -2.58
SSX8Q7RTT4 SNORD56B-201ENST00000384713 71 ntBASIC-1.08□□□□□ -2.58
SSX8Q7RTT4 MIR616-201ENST00000385293 97 ntBASIC-1.08□□□□□ -2.58
SSX8Q7RTT4 SNORD63B-201ENST00000411005 70 ntBASIC-1.08□□□□□ -2.58
SSX8Q7RTT4 RNU6-453P-201ENST00000516819 85 ntBASIC-1.08□□□□□ -2.58
SSX8Q7RTT4 AC026407.1-201ENST00000518369 204 ntBASIC-1.08□□□□□ -2.58
SSX8Q7RTT4 AC092794.1-201ENST00000612734 582 ntBASIC-1.08□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.09□□□□□ -2.58
SSX8Q7RTT4 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.09□□□□□ -2.58
SSX8Q7RTT4 RNU6-901P-201ENST00000384593 106 ntBASIC-1.09□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.09□□□□□ -2.58
SSX8Q7RTT4 SNORD83B-201ENST00000386745 93 ntBASIC-1.09□□□□□ -2.58
SSX8Q7RTT4 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.09□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.09□□□□□ -2.58
SSX8Q7RTT4 MIR4460-201ENST00000577862 86 ntBASIC-1.09□□□□□ -2.58
SSX8Q7RTT4 AC037487.3-201ENST00000606668 112 ntBASIC-1.09□□□□□ -2.58
SSX8Q7RTT4 AC112487.2-201ENST00000637950 304 ntBASIC-1.09□□□□□ -2.58
SSX8Q7RTT4 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.1□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.1□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.1□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.1□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.1□□□□□ -2.59
SSX8Q7RTT4 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.1□□□□□ -2.59
SSX8Q7RTT4 MIR20A-201ENST00000362279 71 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 SNORA79-201ENST00000408376 140 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 MTATP6P23-201ENST00000440153 476 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 SNORA13-201ENST00000458790 133 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 RNU7-48P-201ENST00000458875 63 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 RNU6-881P-201ENST00000516813 102 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 AP000676.1-201ENST00000533307 52 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 AC084781.2-201ENST00000615568 161 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 MIR6851-201ENST00000617060 67 ntBASIC-1.11□□□□□ -2.59
SSX8Q7RTT4 UBE2WP1-201ENST00000362030 340 ntBASIC-1.12□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.12□□□□□ -2.59
SSX8Q7RTT4 RNU6-170P-201ENST00000362832 104 ntBASIC-1.12□□□□□ -2.59
SSX8Q7RTT4 SNORD115-44-201ENST00000365391 82 ntBASIC-1.12□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.12□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.12□□□□□ -2.59
SSX8Q7RTT4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.12□□□□□ -2.59
SSX8Q7RTT4 RNU7-152P-201ENST00000458982 64 ntBASIC-1.12□□□□□ -2.59
SSX8Q7RTT4 RNU6-561P-201ENST00000516222 102 ntBASIC-1.12□□□□□ -2.59
SSX8Q7RTT4 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms