Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 AC011476.5-201ENST00000615594 130 ntBASIC-1.57□□□□□ -2.66
VPS13DQ5THJ4 RNU6-690P-201ENST00000365242 106 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 AL590004.1-201ENST00000405321 300 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 MIR516A2-201ENST00000384888 90 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 MIR516A1-201ENST00000385033 90 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 AC073415.1-201ENST00000449240 153 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 RNA5SP147-201ENST00000516493 109 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 AP000720.1-201ENST00000625091 483 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 AL160004.2-201ENST00000432935 350 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 MIR548AG1-201ENST00000579932 66 ntBASIC-1.58□□□□□ -2.66
VPS13DQ5THJ4 RNU6-495P-201ENST00000362995 107 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 RNU6-710P-201ENST00000410424 105 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 AP001362.1-201ENST00000625165 124 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 EIF1P2-201ENST00000428233 350 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 U6.100-201ENST00000636230 99 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 MIR3646-201ENST00000578301 84 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 AP001506.1-201ENST00000615444 211 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 RNU6-472P-201ENST00000384299 107 ntBASIC-1.59□□□□□ -2.66
VPS13DQ5THJ4 RNU6-181P-201ENST00000363225 107 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 RNU6-281P-201ENST00000384212 103 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 MIR5692C2-201ENST00000577959 77 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 AC005014.3-201ENST00000605985 190 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 RNU6-647P-201ENST00000364243 107 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 AC107399.1-201ENST00000451226 265 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 RNU7-88P-201ENST00000458752 63 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 AP003357.1-201ENST00000604497 148 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 TRDV1-202ENST00000621643 102 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 RNU6-694P-201ENST00000364071 147 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 MRPL42P2-201ENST00000403169 426 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 SNORD12B-201ENST00000410433 91 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 RNU7-106P-201ENST00000459514 67 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 AC005357.1-201ENST00000588399 301 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.6□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNU6-596P-201ENST00000365395 98 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNU6-608P-201ENST00000383927 104 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNU6-298P-201ENST00000390888 96 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNY4P25-201ENST00000459254 96 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 SNORA40.9-201ENST00000515895 93 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNU6-20P-201ENST00000384106 107 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNU6-458P-201ENST00000384179 107 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 SNORD61-201ENST00000384252 73 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 SEPT14P8-201ENST00000508026 178 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 SNORA19.3-201ENST00000516165 130 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 MIR4789-201ENST00000577469 82 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 U6.58-201ENST00000613107 107 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNU6-236P-201ENST00000363886 106 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 MTATP6P21-201ENST00000440681 189 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 MIR5197-201ENST00000583721 112 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 MIR1264-201ENST00000616374 69 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 AC099654.14-201ENST00000638599 341 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNU6-517P-201ENST00000384362 110 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNU6-696P-201ENST00000390834 107 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 SNORD115.1-201ENST00000391109 76 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 RNU7-141P-201ENST00000459304 62 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 TPTEP1-208ENST00000636884 213 ntBASIC-1.61□□□□□ -2.67
VPS13DQ5THJ4 SNORA22.1-201ENST00000362701 134 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 RNU6-129P-201ENST00000391022 107 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 RNA5SP144-201ENST00000410846 116 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 MIR4790-201ENST00000577799 79 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 AL512427.1-201ENST00000618593 349 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 SNORD27-201ENST00000363981 72 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 SNORD114-13-201ENST00000364377 74 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.62□□□□□ -2.67
VPS13DQ5THJ4 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 224.5 ms