Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNU6-53P-201ENST00000365367 106 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 RNY1P7-201ENST00000384743 110 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 MIR605-201ENST00000385078 83 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 RNA5SP220-201ENST00000516298 104 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 SNORA72.7-201ENST00000516349 94 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 MIR8065-201ENST00000620577 100 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 Z97988.1-201ENST00000637697 135 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 Y_RNA.155-201ENST00000363632 101 ntBASIC1.49□□□□□ -2.17
SLC44A4Q53GD3 RNA5SP48-201ENST00000363969 126 ntBASIC1.49□□□□□ -2.17
SLC44A4Q53GD3 RNU4-67P-201ENST00000364569 141 ntBASIC1.49□□□□□ -2.17
SLC44A4Q53GD3 SNORD114-22-201ENST00000365423 72 ntBASIC1.49□□□□□ -2.17
SLC44A4Q53GD3 MIR1912-201ENST00000410389 80 ntBASIC1.49□□□□□ -2.17
SLC44A4Q53GD3 SNORA7.5-201ENST00000410672 110 ntBASIC1.49□□□□□ -2.17
SLC44A4Q53GD3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SLC44A4Q53GD3 RNU6-363P-201ENST00000362895 105 ntBASIC1.48□□□□□ -2.17
SLC44A4Q53GD3 RNU6-1113P-201ENST00000384348 107 ntBASIC1.48□□□□□ -2.17
SLC44A4Q53GD3 SNORA18-201ENST00000384416 132 ntBASIC1.48□□□□□ -2.17
SLC44A4Q53GD3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.48□□□□□ -2.17
SLC44A4Q53GD3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.48□□□□□ -2.17
SLC44A4Q53GD3 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
SLC44A4Q53GD3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.48□□□□□ -2.17
SLC44A4Q53GD3 MIR6734-201ENST00000621166 68 ntBASIC1.48□□□□□ -2.17
SLC44A4Q53GD3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 RNU6-409P-201ENST00000384114 104 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 SNORD77B-201ENST00000391112 67 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 MIR1302-7-201ENST00000408841 72 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 RNU6-733P-201ENST00000410759 104 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 AL353813.1-201ENST00000440700 253 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 RNU6-904P-201ENST00000516206 101 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 RNU6-521P-201ENST00000516663 105 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 MIR6078-201ENST00000611069 100 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 RMST_2.1-201ENST00000617263 136 ntBASIC1.47□□□□□ -2.17
SLC44A4Q53GD3 RNU6-1099P-201ENST00000363533 107 ntBASIC1.46□□□□□ -2.18
SLC44A4Q53GD3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.46□□□□□ -2.18
SLC44A4Q53GD3 MIR577-201ENST00000385196 96 ntBASIC1.46□□□□□ -2.18
SLC44A4Q53GD3 RNU6-679P-201ENST00000391003 106 ntBASIC1.46□□□□□ -2.18
SLC44A4Q53GD3 MIR1185-1-201ENST00000408598 86 ntBASIC1.46□□□□□ -2.18
SLC44A4Q53GD3 RNY4P29-201ENST00000410801 97 ntBASIC1.46□□□□□ -2.18
SLC44A4Q53GD3 AL133373.1-201ENST00000497098 94 ntBASIC1.46□□□□□ -2.18
SLC44A4Q53GD3 AC062037.1-201ENST00000605302 128 ntBASIC1.46□□□□□ -2.18
SLC44A4Q53GD3 MIR103A2-201ENST00000362154 78 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 RNA5SP327-201ENST00000362494 101 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 RNA5SP264-201ENST00000363115 107 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 RNU6-294P-201ENST00000364999 102 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 SNORD38B-201ENST00000384690 67 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 AC244023.1-201ENST00000426884 112 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 SNORA40.13-201ENST00000516379 120 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 DEFB131E-201ENST00000532329 154 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 AC242498.1-201ENST00000604134 111 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 SNORD38B-202ENST00000625943 69 ntBASIC1.45□□□□□ -2.18
SLC44A4Q53GD3 RNY3P2-201ENST00000362918 102 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 Y_RNA.78-201ENST00000362970 110 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 Y_RNA.544-201ENST00000384650 113 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 RNU6-910P-201ENST00000390844 107 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 RNU6-592P-201ENST00000411333 103 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 RNU7-79P-201ENST00000516082 62 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 RNU7-35P-201ENST00000517174 62 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 AP003716.2-201ENST00000528260 108 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 MIR548Z-201ENST00000584743 97 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 FAM71BP1-201ENST00000604431 523 ntBASIC1.44□□□□□ -2.18
SLC44A4Q53GD3 RNU6-832P-201ENST00000363319 107 ntBASIC1.43□□□□□ -2.18
SLC44A4Q53GD3 MIR150-201ENST00000385048 84 ntBASIC1.43□□□□□ -2.18
SLC44A4Q53GD3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.43□□□□□ -2.18
SLC44A4Q53GD3 SNORA75.2-201ENST00000391138 150 ntBASIC1.43□□□□□ -2.18
SLC44A4Q53GD3 SNORA75.3-201ENST00000391231 150 ntBASIC1.43□□□□□ -2.18
SLC44A4Q53GD3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.43□□□□□ -2.18
SLC44A4Q53GD3 SNORD67.1-201ENST00000516618 108 ntBASIC1.43□□□□□ -2.18
SLC44A4Q53GD3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 MIR96-201ENST00000362288 78 ntBASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 RNU4-36P-201ENST00000364294 144 ntBASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 SNORD115-35-201ENST00000365122 82 ntBASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 MTATP8P2-201ENST00000435212 202 ntBASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 RNU6-795P-201ENST00000516323 103 ntBASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 RNU6-844P-201ENST00000517175 102 ntBASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 MIR4694-201ENST00000578534 80 ntBASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 AC105081.1-201ENST00000617727 106 ntBASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 Y_RNA.818-201ENST00000618813 71 ntBASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 AL512310.12-203ENST00000640543 90 ntBASIC1.42□□□□□ -2.18
SLC44A4Q53GD3 RNU6-654P-201ENST00000364373 107 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 RNU6-573P-201ENST00000383938 106 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 MIR206-201ENST00000384872 86 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 MIR7-2-201ENST00000384970 110 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 UBL5P1-201ENST00000507979 193 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 SCARNA23-201ENST00000516060 130 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 RNU7-2P-201ENST00000516096 62 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 AC012531.4-201ENST00000616509 177 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 AC091304.10-201ENST00000641554 121 ntBASIC1.41□□□□□ -2.18
SLC44A4Q53GD3 Y_RNA.107-201ENST00000363190 121 ntBASIC1.4□□□□□ -2.19
SLC44A4Q53GD3 RNA5SP173-201ENST00000364857 136 ntBASIC1.4□□□□□ -2.19
SLC44A4Q53GD3 MIR1302-4-201ENST00000408701 150 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms