Protein–RNA interactions for Protein: Q16649

NFIL3, Nuclear factor interleukin-3-regulated protein, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3Q16649 Y_RNA.270-201ENST00000364693 104 ntBASIC0.69□□□□□ -2.3
NFIL3Q16649 Y_RNA.531-201ENST00000384589 121 ntBASIC0.69□□□□□ -2.3
NFIL3Q16649 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
NFIL3Q16649 MIR7-2-201ENST00000384970 110 ntBASIC0.69□□□□□ -2.3
NFIL3Q16649 Y_RNA.588-201ENST00000391254 102 ntBASIC0.69□□□□□ -2.3
NFIL3Q16649 RNA5SP33-201ENST00000516687 98 ntBASIC0.69□□□□□ -2.3
NFIL3Q16649 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.69□□□□□ -2.3
NFIL3Q16649 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
NFIL3Q16649 MIR18A-201ENST00000362310 71 ntBASIC0.68□□□□□ -2.3
NFIL3Q16649 Y_RNA.150-201ENST00000363562 102 ntBASIC0.68□□□□□ -2.3
NFIL3Q16649 RNU4-45P-201ENST00000365469 141 ntBASIC0.68□□□□□ -2.3
NFIL3Q16649 AC002350.1-201ENST00000490759 375 ntBASIC0.68□□□□□ -2.3
NFIL3Q16649 MIR3144-201ENST00000579460 79 ntBASIC0.68□□□□□ -2.3
NFIL3Q16649 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
NFIL3Q16649 AC021443.1-201ENST00000604478 211 ntBASIC0.68□□□□□ -2.3
NFIL3Q16649 AC098479.1-201ENST00000609225 154 ntBASIC0.68□□□□□ -2.3
NFIL3Q16649 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.68□□□□□ -2.3
NFIL3Q16649 SNORD116-18-201ENST00000383961 92 ntBASIC0.67□□□□□ -2.3
NFIL3Q16649 RNU6-804P-201ENST00000384286 107 ntBASIC0.67□□□□□ -2.3
NFIL3Q16649 AC108059.2-201ENST00000434626 151 ntBASIC0.67□□□□□ -2.3
NFIL3Q16649 RNU6-448P-201ENST00000517052 107 ntBASIC0.67□□□□□ -2.3
NFIL3Q16649 MIR3671-201ENST00000580455 88 ntBASIC0.67□□□□□ -2.3
NFIL3Q16649 MIR4491-201ENST00000581087 68 ntBASIC0.67□□□□□ -2.3
NFIL3Q16649 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.66□□□□□ -2.3
NFIL3Q16649 Y_RNA.36-201ENST00000362602 112 ntBASIC0.66□□□□□ -2.3
NFIL3Q16649 RNU7-164P-201ENST00000459221 62 ntBASIC0.66□□□□□ -2.3
NFIL3Q16649 MIR6082-201ENST00000613604 109 ntBASIC0.66□□□□□ -2.3
NFIL3Q16649 Y_RNA.13-201ENST00000362403 112 ntBASIC0.65□□□□□ -2.31
NFIL3Q16649 RNU6-403P-201ENST00000363163 104 ntBASIC0.65□□□□□ -2.31
NFIL3Q16649 SNORA36.2-201ENST00000384004 127 ntBASIC0.65□□□□□ -2.31
NFIL3Q16649 RNU7-123P-201ENST00000515911 60 ntBASIC0.65□□□□□ -2.31
NFIL3Q16649 RNU6-765P-201ENST00000516916 99 ntBASIC0.65□□□□□ -2.31
NFIL3Q16649 AP003327.1-201ENST00000529684 127 ntBASIC0.65□□□□□ -2.31
NFIL3Q16649 MIR548AE2-201ENST00000583456 67 ntBASIC0.65□□□□□ -2.31
NFIL3Q16649 AL589743.1-201ENST00000551932 2712 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 Y_RNA.366-201ENST00000365540 102 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 Y_RNA.398-201ENST00000383952 99 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 RNY1P8-201ENST00000383970 114 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 RNY1P4-201ENST00000384595 115 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 Y_RNA.540-201ENST00000384638 111 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 Y_RNA.555-201ENST00000384673 110 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 MIR140-201ENST00000385282 100 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 RNU6-460P-201ENST00000391158 108 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 MIR513C-201ENST00000401352 84 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
NFIL3Q16649 Y_RNA.298-201ENST00000364960 107 ntBASIC0.63□□□□□ -2.31
NFIL3Q16649 SNORA32-201ENST00000384072 121 ntBASIC0.63□□□□□ -2.31
NFIL3Q16649 MIR216A-201ENST00000385063 110 ntBASIC0.63□□□□□ -2.31
NFIL3Q16649 MIR3121-201ENST00000579680 77 ntBASIC0.63□□□□□ -2.31
NFIL3Q16649 AC108081.1-201ENST00000604358 221 ntBASIC0.63□□□□□ -2.31
NFIL3Q16649 Y_RNA.8-201ENST00000362353 102 ntBASIC0.62□□□□□ -2.31
NFIL3Q16649 RNU6-915P-201ENST00000364943 103 ntBASIC0.62□□□□□ -2.31
NFIL3Q16649 RNA5SP117-201ENST00000365294 118 ntBASIC0.62□□□□□ -2.31
NFIL3Q16649 Y_RNA.400-201ENST00000383963 111 ntBASIC0.62□□□□□ -2.31
NFIL3Q16649 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
NFIL3Q16649 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
NFIL3Q16649 MIR548X2-201ENST00000579776 100 ntBASIC0.62□□□□□ -2.31
NFIL3Q16649 AL137067.1-201ENST00000615933 120 ntBASIC0.62□□□□□ -2.31
NFIL3Q16649 AP001340.1-201ENST00000624405 217 ntBASIC0.62□□□□□ -2.31
NFIL3Q16649 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
NFIL3Q16649 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
NFIL3Q16649 SNORD114-26-201ENST00000363543 72 ntBASIC0.61□□□□□ -2.31
NFIL3Q16649 Y_RNA.299-201ENST00000364973 94 ntBASIC0.61□□□□□ -2.31
NFIL3Q16649 Y_RNA.617-201ENST00000410920 90 ntBASIC0.61□□□□□ -2.31
NFIL3Q16649 Y_RNA.692-201ENST00000516627 105 ntBASIC0.61□□□□□ -2.31
NFIL3Q16649 MIR6779-201ENST00000617283 64 ntBASIC0.61□□□□□ -2.31
NFIL3Q16649 Y_RNA.180-201ENST00000363867 113 ntBASIC0.6□□□□□ -2.31
NFIL3Q16649 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
NFIL3Q16649 RNU4-69P-201ENST00000410677 143 ntBASIC0.6□□□□□ -2.31
NFIL3Q16649 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.6□□□□□ -2.31
NFIL3Q16649 MIR1270-201ENST00000459320 83 ntBASIC0.6□□□□□ -2.31
NFIL3Q16649 SNORA25.12-201ENST00000516202 82 ntBASIC0.6□□□□□ -2.31
NFIL3Q16649 RNU7-137P-201ENST00000516788 62 ntBASIC0.6□□□□□ -2.31
NFIL3Q16649 RN7SL793P-201ENST00000583259 296 ntBASIC0.6□□□□□ -2.31
NFIL3Q16649 SNORD114-10-201ENST00000363409 72 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 Y_RNA.205-201ENST00000364128 113 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 Y_RNA.215-201ENST00000364204 112 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 Y_RNA.464-201ENST00000384282 110 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 SNORA72.6-201ENST00000384520 129 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 RNU5E-3P-201ENST00000515913 68 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 RNA5SP121-201ENST00000516537 101 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 SNORD67.1-201ENST00000516618 108 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 SNORA25.16-201ENST00000516741 121 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 MTND5P41-201ENST00000517498 206 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 AL359881.1-201ENST00000602916 267 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 MIR6513-201ENST00000621188 64 ntBASIC0.59□□□□□ -2.31
NFIL3Q16649 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
NFIL3Q16649 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.58□□□□□ -2.32
NFIL3Q16649 RN7SKP12-201ENST00000516275 143 ntBASIC0.58□□□□□ -2.32
NFIL3Q16649 RNY4P20-201ENST00000516678 93 ntBASIC0.58□□□□□ -2.32
NFIL3Q16649 MIR3678-201ENST00000578455 94 ntBASIC0.58□□□□□ -2.32
NFIL3Q16649 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
NFIL3Q16649 AC021753.1-201ENST00000635724 168 ntBASIC0.58□□□□□ -2.32
NFIL3Q16649 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
NFIL3Q16649 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
NFIL3Q16649 MIR569-201ENST00000385228 96 ntBASIC0.57□□□□□ -2.32
NFIL3Q16649 AC092628.1-201ENST00000436250 252 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms