Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MTND5P5-201ENST00000503764 376 ntBASIC-2.25□□□□□ -2.77
HIST1H1AQ02539 RN7SKP298-201ENST00000515950 94 ntBASIC-2.25□□□□□ -2.77
HIST1H1AQ02539 RNU6-191P-201ENST00000516295 94 ntBASIC-2.25□□□□□ -2.77
HIST1H1AQ02539 AC009094.1-201ENST00000564443 426 ntBASIC-2.25□□□□□ -2.77
HIST1H1AQ02539 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-2.25□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.207-201ENST00000364142 106 ntBASIC-2.26□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.26□□□□□ -2.77
HIST1H1AQ02539 RNU6-593P-201ENST00000364716 112 ntBASIC-2.26□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.301-201ENST00000364990 103 ntBASIC-2.26□□□□□ -2.77
HIST1H1AQ02539 RNU6-307P-201ENST00000516743 106 ntBASIC-2.26□□□□□ -2.77
HIST1H1AQ02539 AC144568.1-201ENST00000520139 137 ntBASIC-2.26□□□□□ -2.77
HIST1H1AQ02539 MIR6773-201ENST00000612812 74 ntBASIC-2.26□□□□□ -2.77
HIST1H1AQ02539 AP001362.1-201ENST00000625165 124 ntBASIC-2.26□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.380-201ENST00000365663 111 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.404-201ENST00000383978 102 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 MIR29B1-201ENST00000385015 81 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 RNU6-908P-201ENST00000410160 94 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 AC022028.1-201ENST00000412054 408 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 RNU7-169P-201ENST00000459456 61 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 AL512360.1-201ENST00000555346 234 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 MIR5692C2-201ENST00000577959 77 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 YWHAEP3-201ENST00000582767 121 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 NBR2-204ENST00000587322 63 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 AL162413.1-201ENST00000603198 110 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 MIR548O2-201ENST00000616090 70 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 MIR6818-201ENST00000621576 65 ntBASIC-2.27□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.28□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.28□□□□□ -2.77
HIST1H1AQ02539 SNORA62.4-201ENST00000365504 151 ntBASIC-2.28□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.432-201ENST00000384087 111 ntBASIC-2.28□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.596-201ENST00000410462 109 ntBASIC-2.28□□□□□ -2.77
HIST1H1AQ02539 RNU6-1281P-201ENST00000516223 105 ntBASIC-2.28□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.715-201ENST00000517082 110 ntBASIC-2.28□□□□□ -2.77
HIST1H1AQ02539 U4.2-201ENST00000618561 85 ntBASIC-2.28□□□□□ -2.77
HIST1H1AQ02539 MIR6863-201ENST00000636112 90 ntBASIC-2.28□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.293-201ENST00000364908 93 ntBASIC-2.29□□□□□ -2.78
HIST1H1AQ02539 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.29□□□□□ -2.78
HIST1H1AQ02539 SNORA75-201ENST00000384158 137 ntBASIC-2.29□□□□□ -2.78
HIST1H1AQ02539 RNU6-21P-201ENST00000384710 107 ntBASIC-2.29□□□□□ -2.78
HIST1H1AQ02539 MIR516A2-201ENST00000384888 90 ntBASIC-2.29□□□□□ -2.78
HIST1H1AQ02539 MIR516A1-201ENST00000385033 90 ntBASIC-2.29□□□□□ -2.78
HIST1H1AQ02539 Y_RNA.582-201ENST00000391023 95 ntBASIC-2.29□□□□□ -2.78
HIST1H1AQ02539 RNU7-4P-201ENST00000516961 62 ntBASIC-2.29□□□□□ -2.78
HIST1H1AQ02539 MIR6502-201ENST00000617296 76 ntBASIC-2.29□□□□□ -2.78
HIST1H1AQ02539 RNU6-451P-201ENST00000362921 107 ntBASIC-2.3□□□□□ -2.78
HIST1H1AQ02539 RNY3-201ENST00000365484 102 ntBASIC-2.3□□□□□ -2.78
HIST1H1AQ02539 MIRLET7B-201ENST00000385140 83 ntBASIC-2.3□□□□□ -2.78
HIST1H1AQ02539 MIR216B-201ENST00000390186 82 ntBASIC-2.3□□□□□ -2.78
HIST1H1AQ02539 MIR526A2-201ENST00000390198 65 ntBASIC-2.3□□□□□ -2.78
HIST1H1AQ02539 RNU4-61P-201ENST00000411243 107 ntBASIC-2.3□□□□□ -2.78
HIST1H1AQ02539 TRDV1-202ENST00000621643 102 ntBASIC-2.3□□□□□ -2.78
HIST1H1AQ02539 AC090617.10-201ENST00000624308 134 ntBASIC-2.3□□□□□ -2.78
HIST1H1AQ02539 RNY3P11-201ENST00000364153 102 ntBASIC-2.31□□□□□ -2.78
HIST1H1AQ02539 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.31□□□□□ -2.78
HIST1H1AQ02539 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.31□□□□□ -2.78
HIST1H1AQ02539 MIR206-201ENST00000384872 86 ntBASIC-2.31□□□□□ -2.78
HIST1H1AQ02539 RNU2-51P-201ENST00000410708 197 ntBASIC-2.31□□□□□ -2.78
HIST1H1AQ02539 MTND3P10-201ENST00000450967 341 ntBASIC-2.31□□□□□ -2.78
HIST1H1AQ02539 RNU6-764P-201ENST00000516396 105 ntBASIC-2.31□□□□□ -2.78
HIST1H1AQ02539 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-2.31□□□□□ -2.78
HIST1H1AQ02539 U6.100-201ENST00000636230 99 ntBASIC-2.31□□□□□ -2.78
HIST1H1AQ02539 SNORD114-3-201ENST00000364969 75 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 RNU6-1228P-201ENST00000391014 107 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 Y_RNA.605-201ENST00000410577 105 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 RPS3AP52-201ENST00000435639 297 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 MIR1270-201ENST00000459320 83 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 RNU6-850P-201ENST00000516934 103 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 RNU6-570P-201ENST00000517051 105 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 RNU6-762P-201ENST00000517107 102 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 AC068339.1-201ENST00000526965 141 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 MIR5688-201ENST00000580619 83 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 AC084781.2-201ENST00000615568 161 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 U2.1-201ENST00000618978 145 ntBASIC-2.32□□□□□ -2.78
HIST1H1AQ02539 RNY4P6-201ENST00000363667 96 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 RNY3P3-201ENST00000363816 102 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 SNORD114-4-201ENST00000363962 75 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 RNY1P6-201ENST00000384193 109 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 RNU6-1104P-201ENST00000384723 104 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 MIR628-201ENST00000385229 95 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 SNRPGP8-201ENST00000454064 226 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 AC019235.1-201ENST00000503847 207 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 SCARNA15-202ENST00000516881 127 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 RNU6-1314P-201ENST00000517139 104 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 AC007485.1-201ENST00000616755 206 ntBASIC-2.33□□□□□ -2.78
HIST1H1AQ02539 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.34□□□□□ -2.78
HIST1H1AQ02539 RNU6-483P-201ENST00000384088 108 ntBASIC-2.34□□□□□ -2.78
HIST1H1AQ02539 SNORD63-201ENST00000384262 68 ntBASIC-2.34□□□□□ -2.78
HIST1H1AQ02539 Y_RNA.531-201ENST00000384589 121 ntBASIC-2.34□□□□□ -2.78
HIST1H1AQ02539 RNU6-337P-201ENST00000391243 106 ntBASIC-2.34□□□□□ -2.78
HIST1H1AQ02539 Y_RNA.682-201ENST00000516457 100 ntBASIC-2.34□□□□□ -2.78
HIST1H1AQ02539 RNU6-911P-201ENST00000516523 104 ntBASIC-2.34□□□□□ -2.78
HIST1H1AQ02539 AL365205.2-201ENST00000594586 68 ntBASIC-2.34□□□□□ -2.78
HIST1H1AQ02539 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.35□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms