Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MIR4639-201ENST00000584938 69 ntBASIC0.04□□□□□ -2.4
HMGCS1Q01581 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
HMGCS1Q01581 AC091304.10-201ENST00000641554 121 ntBASIC0.04□□□□□ -2.4
HMGCS1Q01581 Y_RNA.120-201ENST00000363304 110 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 RNA5SP214-201ENST00000363378 118 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 RNU6-1099P-201ENST00000363533 107 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 Y_RNA.258-201ENST00000364613 105 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 RNU6-275P-201ENST00000364910 107 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 Y_RNA.521-201ENST00000384560 114 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 SNORD58.1-201ENST00000391313 66 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 RNU6-135P-201ENST00000516769 101 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 MIR4752-201ENST00000579672 72 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 U6.109-201ENST00000636749 87 ntBASIC0.03□□□□□ -2.4
HMGCS1Q01581 SNORA9.1-201ENST00000362412 131 ntBASIC0.02□□□□□ -2.41
HMGCS1Q01581 RNU6-1082P-201ENST00000364574 107 ntBASIC0.02□□□□□ -2.41
HMGCS1Q01581 Y_RNA.366-201ENST00000365540 102 ntBASIC0.02□□□□□ -2.41
HMGCS1Q01581 MIR1197-201ENST00000408818 88 ntBASIC0.02□□□□□ -2.41
HMGCS1Q01581 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.02□□□□□ -2.41
HMGCS1Q01581 AL359881.1-201ENST00000602916 267 ntBASIC0.02□□□□□ -2.41
HMGCS1Q01581 MIR6779-201ENST00000617283 64 ntBASIC0.02□□□□□ -2.41
HMGCS1Q01581 Y_RNA.20-201ENST00000362479 113 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 SNORD115-2-201ENST00000362842 82 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 RNU4-58P-201ENST00000363192 141 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 SNORD115-20-201ENST00000365099 82 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 RNU6-1126P-201ENST00000384002 107 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 RNA5SP63-201ENST00000391225 112 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 AL022718.1-201ENST00000412004 84 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 RNA5SP236-201ENST00000516169 116 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 Y_RNA.680-201ENST00000516441 93 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 SNORD67.1-201ENST00000516618 108 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 RNA5SP330-201ENST00000517096 96 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 AC138749.4-201ENST00000563970 127 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 MIR3128-201ENST00000581957 66 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 AL360085.1-201ENST00000604713 532 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 AC104408.1-201ENST00000605241 170 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.01□□□□□ -2.41
HMGCS1Q01581 Y_RNA.49-201ENST00000362714 112 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 Y_RNA.75-201ENST00000362927 97 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 RNU6-768P-201ENST00000384683 107 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 MIR7-2-201ENST00000384970 110 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 MIR760-201ENST00000390220 80 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 MTCYBP9-201ENST00000431021 303 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 RNU7-129P-201ENST00000516128 62 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 Y_RNA.668-201ENST00000516233 93 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 RNU6-1232P-201ENST00000516299 86 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 RNU2-35P-201ENST00000516446 142 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 RNU7-137P-201ENST00000516788 62 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 MIR548AE2-201ENST00000583456 67 ntBASIC0□□□□□ -2.41
HMGCS1Q01581 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.01□□□□□ -2.41
HMGCS1Q01581 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.01□□□□□ -2.41
HMGCS1Q01581 RNU6-702P-201ENST00000364982 107 ntBASIC-0.01□□□□□ -2.41
HMGCS1Q01581 RNU6-690P-201ENST00000365242 106 ntBASIC-0.01□□□□□ -2.41
HMGCS1Q01581 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.01□□□□□ -2.41
HMGCS1Q01581 RNU6-127P-201ENST00000390897 107 ntBASIC-0.01□□□□□ -2.41
HMGCS1Q01581 RNU6-918P-201ENST00000391219 106 ntBASIC-0.01□□□□□ -2.41
HMGCS1Q01581 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.01□□□□□ -2.41
HMGCS1Q01581 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.01□□□□□ -2.41
HMGCS1Q01581 AC105081.1-201ENST00000617727 106 ntBASIC-0.01□□□□□ -2.41
HMGCS1Q01581 MIR101-2-201ENST00000362195 79 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 SNORD115-24-201ENST00000363528 82 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 RNU6-47P-201ENST00000383866 107 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 MIR643-201ENST00000385267 97 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 AC108059.2-201ENST00000434626 151 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 MIR1270-201ENST00000459320 83 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 MIR4305-201ENST00000583252 102 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 RNU1-29P-201ENST00000606574 126 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 MIR499B-201ENST00000636498 73 ntBASIC-0.02□□□□□ -2.41
HMGCS1Q01581 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.02□□□□□ -2.41
HMGCS1Q01581 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.03□□□□□ -2.41
HMGCS1Q01581 SNORD114-5-201ENST00000362928 70 ntBASIC-0.03□□□□□ -2.41
HMGCS1Q01581 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.03□□□□□ -2.41
HMGCS1Q01581 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.03□□□□□ -2.41
HMGCS1Q01581 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.03□□□□□ -2.41
HMGCS1Q01581 RNU6-240P-201ENST00000516098 97 ntBASIC-0.03□□□□□ -2.41
HMGCS1Q01581 RNU6-111P-201ENST00000517179 105 ntBASIC-0.03□□□□□ -2.41
HMGCS1Q01581 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.04□□□□□ -2.42
HMGCS1Q01581 RNY1P2-201ENST00000364820 117 ntBASIC-0.04□□□□□ -2.42
HMGCS1Q01581 RNA5SP128-201ENST00000365305 116 ntBASIC-0.04□□□□□ -2.42
HMGCS1Q01581 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.04□□□□□ -2.42
HMGCS1Q01581 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.04□□□□□ -2.42
HMGCS1Q01581 RNU4-71P-201ENST00000516258 113 ntBASIC-0.04□□□□□ -2.42
HMGCS1Q01581 RNU6-327P-201ENST00000516270 127 ntBASIC-0.04□□□□□ -2.42
HMGCS1Q01581 AC062037.2-201ENST00000610137 73 ntBASIC-0.04□□□□□ -2.42
HMGCS1Q01581 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
HMGCS1Q01581 SNORD114-10-201ENST00000363409 72 ntBASIC-0.05□□□□□ -2.42
HMGCS1Q01581 RNA5SP325-201ENST00000363756 130 ntBASIC-0.05□□□□□ -2.42
HMGCS1Q01581 RNU6-726P-201ENST00000364680 107 ntBASIC-0.05□□□□□ -2.42
HMGCS1Q01581 RNU6-818P-201ENST00000364837 108 ntBASIC-0.05□□□□□ -2.42
HMGCS1Q01581 SNORA2A-201ENST00000383885 135 ntBASIC-0.05□□□□□ -2.42
HMGCS1Q01581 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.05□□□□□ -2.42
HMGCS1Q01581 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.05□□□□□ -2.42
HMGCS1Q01581 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.05□□□□□ -2.42
HMGCS1Q01581 AC244505.6-201ENST00000452829 130 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms