Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 MIR759-201ENST00000390224 91 ntBASIC1.32□□□□□ -2.2
E2F1Q01094 RNY4P29-201ENST00000410801 97 ntBASIC1.32□□□□□ -2.2
E2F1Q01094 Y_RNA.677-201ENST00000516401 85 ntBASIC1.32□□□□□ -2.2
E2F1Q01094 MIR548AE2-201ENST00000583456 67 ntBASIC1.32□□□□□ -2.2
E2F1Q01094 AP000753.3-201ENST00000604083 169 ntBASIC1.32□□□□□ -2.2
E2F1Q01094 SEPT14P17-201ENST00000617978 177 ntBASIC1.32□□□□□ -2.2
E2F1Q01094 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
E2F1Q01094 SNORA63.5-201ENST00000363548 123 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 Y_RNA.163-201ENST00000363702 113 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 Y_RNA.362-201ENST00000365518 110 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 RNU6-573P-201ENST00000383938 106 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 RNU6-32P-201ENST00000383948 107 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 RNU6-13P-201ENST00000384248 107 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 RNU6-342P-201ENST00000384521 104 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 RNU6-12P-201ENST00000384604 107 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 RNU6-41P-201ENST00000384741 107 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 SNORA75.2-201ENST00000391138 150 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 SNORA75.3-201ENST00000391231 150 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 RNU4-69P-201ENST00000410677 143 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 snoU13.2-201ENST00000459201 104 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.31□□□□□ -2.2
E2F1Q01094 AC006254.2-201ENST00000603259 279 ntBASIC1.31□□□□□ -2.2
E2F1Q01094 RNU6-766P-201ENST00000362478 107 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 SNORD114-22-201ENST00000365423 72 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 RNU6-1014P-201ENST00000383940 103 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 RNU6-756P-201ENST00000383997 107 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 SNORA18-201ENST00000384416 132 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 AL031737.1-201ENST00000450125 223 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 RPL39P34-201ENST00000477141 156 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 SNORA72.7-201ENST00000516349 94 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 Y_RNA.773-201ENST00000607168 90 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 MIR6740-201ENST00000618268 113 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 MIR6734-201ENST00000621166 68 ntBASIC1.3□□□□□ -2.2
E2F1Q01094 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
E2F1Q01094 RNY4P6-201ENST00000363667 96 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 Y_RNA.323-201ENST00000365157 109 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 MIR548D2-201ENST00000384955 97 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 RNU6-910P-201ENST00000390844 107 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 RNU6-205P-201ENST00000390858 107 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.29□□□□□ -2.2
E2F1Q01094 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.29□□□□□ -2.2
E2F1Q01094 Y_RNA.694-201ENST00000516677 117 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 RNU7-6P-201ENST00000516845 62 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 RNU7-35P-201ENST00000517174 62 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 RNU6-844P-201ENST00000517175 102 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 RNU6-94P-201ENST00000607728 107 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 AC087741.2-201ENST00000619415 172 ntBASIC1.29□□□□□ -2.2
E2F1Q01094 RNU6-294P-201ENST00000364999 102 ntBASIC1.28□□□□□ -2.2
E2F1Q01094 RNU6-580P-201ENST00000365159 107 ntBASIC1.28□□□□□ -2.2
E2F1Q01094 SNORA32-201ENST00000384072 121 ntBASIC1.28□□□□□ -2.2
E2F1Q01094 MIR588-201ENST00000384900 83 ntBASIC1.28□□□□□ -2.2
E2F1Q01094 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
E2F1Q01094 MIR563-201ENST00000385080 79 ntBASIC1.28□□□□□ -2.2
E2F1Q01094 RNA5SP95-201ENST00000410319 137 ntBASIC1.28□□□□□ -2.2
E2F1Q01094 MIR1255B1-201ENST00000636325 63 ntBASIC1.28□□□□□ -2.2
E2F1Q01094 AC091304.10-201ENST00000641554 121 ntBASIC1.28□□□□□ -2.2
E2F1Q01094 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
E2F1Q01094 SNORD115-19-201ENST00000363098 82 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 SNORD115-18-201ENST00000363293 82 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 Y_RNA.168-201ENST00000363740 102 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 SNORD115-17-201ENST00000364612 82 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 RNA5SP173-201ENST00000364857 136 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 Y_RNA.342-201ENST00000365352 113 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 SNORA51.5-201ENST00000384126 131 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 SNORA80D-201ENST00000384488 135 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 RNU6-1307P-201ENST00000391012 103 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 RNU6-1275P-201ENST00000391087 107 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 RNU6-1086P-201ENST00000410930 100 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 RNU7-62P-201ENST00000458856 62 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 RNU7-21P-201ENST00000459430 62 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 SNORD79.1-201ENST00000516069 84 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 AL662814.1-201ENST00000617364 121 ntBASIC1.27□□□□□ -2.21
E2F1Q01094 Y_RNA.330-201ENST00000365230 109 ntBASIC1.26□□□□□ -2.21
E2F1Q01094 RNU6-1237P-201ENST00000384777 107 ntBASIC1.26□□□□□ -2.21
E2F1Q01094 SNORD77B-201ENST00000391112 67 ntBASIC1.26□□□□□ -2.21
E2F1Q01094 Y_RNA.593-201ENST00000410292 98 ntBASIC1.26□□□□□ -2.21
E2F1Q01094 RNU6-904P-201ENST00000516206 101 ntBASIC1.26□□□□□ -2.21
E2F1Q01094 SNORA70.22-201ENST00000517160 124 ntBASIC1.26□□□□□ -2.21
E2F1Q01094 AC141846.1-201ENST00000568348 142 ntBASIC1.26□□□□□ -2.21
E2F1Q01094 MIR5009-201ENST00000578736 100 ntBASIC1.26□□□□□ -2.21
E2F1Q01094 RMST_2.1-201ENST00000617263 136 ntBASIC1.26□□□□□ -2.21
E2F1Q01094 MIR1245B-201ENST00000636115 69 ntBASIC1.26□□□□□ -2.21
E2F1Q01094 MIR26B-201ENST00000362251 77 ntBASIC1.25□□□□□ -2.21
E2F1Q01094 RNU6-787P-201ENST00000384032 107 ntBASIC1.25□□□□□ -2.21
E2F1Q01094 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
E2F1Q01094 RNU6-1165P-201ENST00000410119 107 ntBASIC1.25□□□□□ -2.21
E2F1Q01094 RNA5SP237-201ENST00000410414 113 ntBASIC1.25□□□□□ -2.21
E2F1Q01094 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.25□□□□□ -2.21
E2F1Q01094 RNU7-79P-201ENST00000516082 62 ntBASIC1.25□□□□□ -2.21
E2F1Q01094 AC068339.1-201ENST00000526965 141 ntBASIC1.25□□□□□ -2.21
E2F1Q01094 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
E2F1Q01094 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
E2F1Q01094 MIR30D-201ENST00000362283 70 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 RNA5SP327-201ENST00000362494 101 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 Y_RNA.290-201ENST00000364879 114 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms