Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 MIR513C-201ENST00000401352 84 ntBASIC0.51□□□□□ -2.33
SRPXP78539 SNORD100-201ENST00000408573 76 ntBASIC0.51□□□□□ -2.33
SRPXP78539 SNORD67.1-201ENST00000516618 108 ntBASIC0.51□□□□□ -2.33
SRPXP78539 MIR6504-201ENST00000613520 61 ntBASIC0.51□□□□□ -2.33
SRPXP78539 MIR6082-201ENST00000613604 109 ntBASIC0.51□□□□□ -2.33
SRPXP78539 MIR8070-201ENST00000616510 88 ntBASIC0.51□□□□□ -2.33
SRPXP78539 MIR6835-201ENST00000621552 64 ntBASIC0.51□□□□□ -2.33
SRPXP78539 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
SRPXP78539 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
SRPXP78539 Y_RNA.400-201ENST00000383963 111 ntBASIC0.5□□□□□ -2.33
SRPXP78539 Y_RNA.420-201ENST00000384043 110 ntBASIC0.5□□□□□ -2.33
SRPXP78539 Y_RNA.555-201ENST00000384673 110 ntBASIC0.5□□□□□ -2.33
SRPXP78539 RNU6-1104P-201ENST00000384723 104 ntBASIC0.5□□□□□ -2.33
SRPXP78539 MIR140-201ENST00000385282 100 ntBASIC0.5□□□□□ -2.33
SRPXP78539 RNY4P20-201ENST00000516678 93 ntBASIC0.5□□□□□ -2.33
SRPXP78539 RNU6-448P-201ENST00000517052 107 ntBASIC0.5□□□□□ -2.33
SRPXP78539 IGKV1-22-201ENST00000524313 326 ntBASIC0.5□□□□□ -2.33
SRPXP78539 MIR548X2-201ENST00000579776 100 ntBASIC0.5□□□□□ -2.33
SRPXP78539 AL137067.1-201ENST00000615933 120 ntBASIC0.5□□□□□ -2.33
SRPXP78539 Y_RNA.170-201ENST00000363746 110 ntBASIC0.49□□□□□ -2.33
SRPXP78539 Y_RNA.215-201ENST00000364204 112 ntBASIC0.49□□□□□ -2.33
SRPXP78539 RNU7-137P-201ENST00000516788 62 ntBASIC0.49□□□□□ -2.33
SRPXP78539 MTND5P34-201ENST00000568888 325 ntBASIC0.49□□□□□ -2.33
SRPXP78539 MIR3121-201ENST00000579680 77 ntBASIC0.49□□□□□ -2.33
SRPXP78539 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.49□□□□□ -2.33
SRPXP78539 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.49□□□□□ -2.33
SRPXP78539 AC105081.1-201ENST00000617727 106 ntBASIC0.49□□□□□ -2.33
SRPXP78539 SNORA25.9-201ENST00000365087 128 ntBASIC0.48□□□□□ -2.33
SRPXP78539 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
SRPXP78539 RNU6-679P-201ENST00000391003 106 ntBASIC0.48□□□□□ -2.33
SRPXP78539 RNU6-426P-201ENST00000516464 97 ntBASIC0.48□□□□□ -2.33
SRPXP78539 RNU6-255P-201ENST00000516957 105 ntBASIC0.48□□□□□ -2.33
SRPXP78539 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
SRPXP78539 AP001328.1-201ENST00000528550 176 ntBASIC0.48□□□□□ -2.33
SRPXP78539 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
SRPXP78539 U6.109-201ENST00000636749 87 ntBASIC0.48□□□□□ -2.33
SRPXP78539 Y_RNA.32-201ENST00000362589 110 ntBASIC0.47□□□□□ -2.33
SRPXP78539 RNA5SP133-201ENST00000363368 119 ntBASIC0.47□□□□□ -2.33
SRPXP78539 Y_RNA.180-201ENST00000363867 113 ntBASIC0.47□□□□□ -2.33
SRPXP78539 Y_RNA.191-201ENST00000363972 113 ntBASIC0.47□□□□□ -2.33
SRPXP78539 SNORD114-22-201ENST00000365423 72 ntBASIC0.47□□□□□ -2.33
SRPXP78539 RNU6-907P-201ENST00000390924 102 ntBASIC0.47□□□□□ -2.33
SRPXP78539 RNU4-54P-201ENST00000516428 129 ntBASIC0.47□□□□□ -2.33
SRPXP78539 Y_RNA.692-201ENST00000516627 105 ntBASIC0.47□□□□□ -2.33
SRPXP78539 Y_RNA.114-201ENST00000363265 113 ntBASIC0.46□□□□□ -2.34
SRPXP78539 Y_RNA.164-201ENST00000363709 102 ntBASIC0.46□□□□□ -2.34
SRPXP78539 RNA5SP117-201ENST00000365294 118 ntBASIC0.46□□□□□ -2.34
SRPXP78539 MIR644A-201ENST00000385262 94 ntBASIC0.46□□□□□ -2.34
SRPXP78539 RNU4-69P-201ENST00000410677 143 ntBASIC0.46□□□□□ -2.34
SRPXP78539 RNU6-531P-201ENST00000516694 104 ntBASIC0.46□□□□□ -2.34
SRPXP78539 DEFB131E-201ENST00000532329 154 ntBASIC0.46□□□□□ -2.34
SRPXP78539 MIR3678-201ENST00000578455 94 ntBASIC0.46□□□□□ -2.34
SRPXP78539 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.45□□□□□ -2.34
SRPXP78539 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
SRPXP78539 Y_RNA.488-201ENST00000384403 102 ntBASIC0.45□□□□□ -2.34
SRPXP78539 RNU6-291P-201ENST00000384720 107 ntBASIC0.45□□□□□ -2.34
SRPXP78539 MIR508-201ENST00000384857 115 ntBASIC0.45□□□□□ -2.34
SRPXP78539 MIR520E-201ENST00000384867 87 ntBASIC0.45□□□□□ -2.34
SRPXP78539 MIR499A-201ENST00000384903 122 ntBASIC0.45□□□□□ -2.34
SRPXP78539 MT-TI-201ENST00000387365 69 ntBASIC0.45□□□□□ -2.34
SRPXP78539 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
SRPXP78539 RNU7-200P-201ENST00000516105 62 ntBASIC0.45□□□□□ -2.34
SRPXP78539 RNU6-346P-201ENST00000516288 111 ntBASIC0.45□□□□□ -2.34
SRPXP78539 RNU6-765P-201ENST00000516916 99 ntBASIC0.45□□□□□ -2.34
SRPXP78539 RNA5SP94-201ENST00000516917 108 ntBASIC0.45□□□□□ -2.34
SRPXP78539 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.45□□□□□ -2.34
SRPXP78539 AP003327.1-201ENST00000529684 127 ntBASIC0.45□□□□□ -2.34
SRPXP78539 CYP3A137P-201ENST00000562436 69 ntBASIC0.45□□□□□ -2.34
SRPXP78539 AC138749.4-201ENST00000563970 127 ntBASIC0.45□□□□□ -2.34
SRPXP78539 MIR3668-201ENST00000582138 75 ntBASIC0.45□□□□□ -2.34
SRPXP78539 MIR4452-201ENST00000583004 71 ntBASIC0.45□□□□□ -2.34
SRPXP78539 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
SRPXP78539 Y_RNA.464-201ENST00000384282 110 ntBASIC0.44□□□□□ -2.34
SRPXP78539 RNU6-1307P-201ENST00000391012 103 ntBASIC0.44□□□□□ -2.34
SRPXP78539 SNORA31.14-201ENST00000516728 116 ntBASIC0.44□□□□□ -2.34
SRPXP78539 Y_RNA.697-201ENST00000516776 113 ntBASIC0.44□□□□□ -2.34
SRPXP78539 uc_338.16-201ENST00000621804 95 ntBASIC0.44□□□□□ -2.34
SRPXP78539 AP001340.1-201ENST00000624405 217 ntBASIC0.44□□□□□ -2.34
SRPXP78539 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SRPXP78539 SNORD114-10-201ENST00000363409 72 ntBASIC0.43□□□□□ -2.34
SRPXP78539 Y_RNA.280-201ENST00000364765 112 ntBASIC0.43□□□□□ -2.34
SRPXP78539 RNU4-45P-201ENST00000365469 141 ntBASIC0.43□□□□□ -2.34
SRPXP78539 Y_RNA.536-201ENST00000384621 113 ntBASIC0.43□□□□□ -2.34
SRPXP78539 RNU6-535P-201ENST00000384722 107 ntBASIC0.43□□□□□ -2.34
SRPXP78539 MIR206-201ENST00000384872 86 ntBASIC0.43□□□□□ -2.34
SRPXP78539 RNU6-1321P-201ENST00000390905 107 ntBASIC0.43□□□□□ -2.34
SRPXP78539 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
SRPXP78539 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
SRPXP78539 RNU6-1212P-201ENST00000517023 104 ntBASIC0.43□□□□□ -2.34
SRPXP78539 AC133485.1-201ENST00000567176 124 ntBASIC0.43□□□□□ -2.34
SRPXP78539 AC138907.6-201ENST00000568401 126 ntBASIC0.43□□□□□ -2.34
SRPXP78539 Y_RNA.119-201ENST00000363301 96 ntBASIC0.42□□□□□ -2.34
SRPXP78539 RNA5SP517-201ENST00000364724 117 ntBASIC0.42□□□□□ -2.34
SRPXP78539 Y_RNA.299-201ENST00000364973 94 ntBASIC0.42□□□□□ -2.34
SRPXP78539 Y_RNA.448-201ENST00000384185 108 ntBASIC0.42□□□□□ -2.34
SRPXP78539 RNU6-616P-201ENST00000384353 107 ntBASIC0.42□□□□□ -2.34
SRPXP78539 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
SRPXP78539 MIR1263-201ENST00000408324 86 ntBASIC0.42□□□□□ -2.34
SRPXP78539 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
SRPXP78539 RN7SKP19-201ENST00000516016 252 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 231.7 ms