Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 Y_RNA.563-201ENST00000384707 108 ntBASIC0.84□□□□□ -2.27
LIMK2P53671 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
LIMK2P53671 RNU6-1154P-201ENST00000391001 104 ntBASIC0.84□□□□□ -2.27
LIMK2P53671 COX6CP6-201ENST00000490840 228 ntBASIC0.84□□□□□ -2.27
LIMK2P53671 PDCD5P2-201ENST00000507570 312 ntBASIC0.84□□□□□ -2.27
LIMK2P53671 RNA5SP33-201ENST00000516687 98 ntBASIC0.84□□□□□ -2.27
LIMK2P53671 AC036111.3-201ENST00000526389 112 ntBASIC0.84□□□□□ -2.27
LIMK2P53671 MIR5000-201ENST00000577717 103 ntBASIC0.84□□□□□ -2.27
LIMK2P53671 AP000753.3-201ENST00000604083 169 ntBASIC0.84□□□□□ -2.27
LIMK2P53671 Y_RNA.168-201ENST00000363740 102 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 SNORA18-201ENST00000384416 132 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 MIR588-201ENST00000384900 83 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 MIR563-201ENST00000385080 79 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 MIR942-201ENST00000401111 86 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 RNU6-735P-201ENST00000410612 107 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 RNU2-51P-201ENST00000410708 197 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 MIR1270-201ENST00000459320 83 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 SNORD33.1-201ENST00000516213 88 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.83□□□□□ -2.28
LIMK2P53671 MIR548AE2-201ENST00000583456 67 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 uc_338.6-201ENST00000613544 171 ntBASIC0.83□□□□□ -2.28
LIMK2P53671 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
LIMK2P53671 Y_RNA.346-201ENST00000365385 112 ntBASIC0.82□□□□□ -2.28
LIMK2P53671 Y_RNA.353-201ENST00000365440 108 ntBASIC0.82□□□□□ -2.28
LIMK2P53671 MIR598-201ENST00000384868 97 ntBASIC0.82□□□□□ -2.28
LIMK2P53671 MIR548I2-201ENST00000408348 149 ntBASIC0.82□□□□□ -2.28
LIMK2P53671 RNU7-62P-201ENST00000458856 62 ntBASIC0.82□□□□□ -2.28
LIMK2P53671 RNU6-313P-201ENST00000516317 112 ntBASIC0.82□□□□□ -2.28
LIMK2P53671 AL662814.1-201ENST00000617364 121 ntBASIC0.82□□□□□ -2.28
LIMK2P53671 U6.95-201ENST00000636931 70 ntBASIC0.82□□□□□ -2.28
LIMK2P53671 Y_RNA.213-201ENST00000364178 111 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 SNORD113.3-201ENST00000364630 78 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 SNORA32-201ENST00000384072 121 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 SNORA2B-201ENST00000384583 137 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 RNU6-1237P-201ENST00000384777 107 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 RNU6-1165P-201ENST00000410119 107 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 RNU4-69P-201ENST00000410677 143 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 FABP5P4-201ENST00000437203 171 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 RNU7-35P-201ENST00000517174 62 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 AC023827.1-201ENST00000569247 97 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 PVT1_3.1-201ENST00000620853 95 ntBASIC0.81□□□□□ -2.28
LIMK2P53671 MIR30D-201ENST00000362283 70 ntBASIC0.8□□□□□ -2.28
LIMK2P53671 Y_RNA.299-201ENST00000364973 94 ntBASIC0.8□□□□□ -2.28
LIMK2P53671 snoU13.21-201ENST00000459368 105 ntBASIC0.8□□□□□ -2.28
LIMK2P53671 AC141846.1-201ENST00000568348 142 ntBASIC0.8□□□□□ -2.28
LIMK2P53671 MIR3163-201ENST00000581592 73 ntBASIC0.8□□□□□ -2.28
LIMK2P53671 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.8□□□□□ -2.28
LIMK2P53671 AC087741.2-201ENST00000619415 172 ntBASIC0.8□□□□□ -2.28
LIMK2P53671 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
LIMK2P53671 Y_RNA.291-201ENST00000364886 113 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 RNU6-1081P-201ENST00000384537 107 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 SNORD111-201ENST00000408139 94 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 RNA5SP237-201ENST00000410414 113 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 RNU6-1086P-201ENST00000410930 100 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 Y_RNA.649-201ENST00000459077 103 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 RNU7-79P-201ENST00000516082 62 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 RNA5SP255-201ENST00000516370 107 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 RNU7-6P-201ENST00000516845 62 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 AL359881.1-201ENST00000602916 267 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 RNU6-94P-201ENST00000607728 107 ntBASIC0.79□□□□□ -2.28
LIMK2P53671 RNY1P13-201ENST00000365030 105 ntBASIC0.78□□□□□ -2.28
LIMK2P53671 MIR548D2-201ENST00000384955 97 ntBASIC0.78□□□□□ -2.28
LIMK2P53671 MIR759-201ENST00000390224 91 ntBASIC0.78□□□□□ -2.28
LIMK2P53671 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
LIMK2P53671 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.78□□□□□ -2.28
LIMK2P53671 RNA5SP436-201ENST00000516020 115 ntBASIC0.78□□□□□ -2.28
LIMK2P53671 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
LIMK2P53671 AL670379.3-201ENST00000605040 251 ntBASIC0.78□□□□□ -2.28
LIMK2P53671 SNORD115-19-201ENST00000363098 82 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 SNORD115-18-201ENST00000363293 82 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 RNY4P6-201ENST00000363667 96 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 SNORD115-17-201ENST00000364612 82 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 Y_RNA.344-201ENST00000365381 112 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 RNU6-949P-201ENST00000384040 107 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 RNU6-1144P-201ENST00000384247 104 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 MIR608-201ENST00000384820 100 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 MIR548A3-201ENST00000385297 97 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 MT-TF-201ENST00000387314 71 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 SNORD83.1-201ENST00000411362 77 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 MIR18B-201ENST00000454574 71 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 Y_RNA.773-201ENST00000607168 90 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.77□□□□□ -2.29
LIMK2P53671 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.77□□□□□ -2.29
LIMK2P53671 RNU6-834P-201ENST00000362367 110 ntBASIC0.76□□□□□ -2.29
LIMK2P53671 RNU6-369P-201ENST00000362515 102 ntBASIC0.76□□□□□ -2.29
LIMK2P53671 RNU6-616P-201ENST00000384353 107 ntBASIC0.76□□□□□ -2.29
LIMK2P53671 RNU6-476P-201ENST00000384726 107 ntBASIC0.76□□□□□ -2.29
LIMK2P53671 MIR548A1-201ENST00000385041 97 ntBASIC0.76□□□□□ -2.29
LIMK2P53671 U8.15-201ENST00000390947 134 ntBASIC0.76□□□□□ -2.29
LIMK2P53671 SNORD77B-201ENST00000391112 67 ntBASIC0.76□□□□□ -2.29
LIMK2P53671 RNU6-1064P-201ENST00000410626 104 ntBASIC0.76□□□□□ -2.29
LIMK2P53671 AC096949.1-201ENST00000412047 152 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms