Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU7-6P-201ENST00000516845 62 ntBASIC1.1□□□□□ -2.23
COPAP53621 MIR4771-2-201ENST00000577758 74 ntBASIC1.1□□□□□ -2.23
COPAP53621 MIR4771-1-201ENST00000582617 74 ntBASIC1.1□□□□□ -2.23
COPAP53621 AL078603.1-201ENST00000603824 313 ntBASIC1.1□□□□□ -2.23
COPAP53621 uc_338.6-201ENST00000613544 171 ntBASIC1.1□□□□□ -2.23
COPAP53621 U6.95-201ENST00000636931 70 ntBASIC1.1□□□□□ -2.23
COPAP53621 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
COPAP53621 MIR1-1-201ENST00000362147 71 ntBASIC1.09□□□□□ -2.23
COPAP53621 RNU6-949P-201ENST00000384040 107 ntBASIC1.09□□□□□ -2.23
COPAP53621 RNU6-22P-201ENST00000384355 107 ntBASIC1.09□□□□□ -2.23
COPAP53621 MIR1257-201ENST00000408490 117 ntBASIC1.09□□□□□ -2.23
COPAP53621 Y_RNA.630-201ENST00000411370 108 ntBASIC1.09□□□□□ -2.23
COPAP53621 RPS26P5-201ENST00000418544 335 ntBASIC1.09□□□□□ -2.23
COPAP53621 AL606753.1-201ENST00000427435 87 ntBASIC1.09□□□□□ -2.23
COPAP53621 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
COPAP53621 AL136317.1-201ENST00000612653 226 ntBASIC1.09□□□□□ -2.23
COPAP53621 AL365222.1-201ENST00000614661 98 ntBASIC1.09□□□□□ -2.23
COPAP53621 AC023934.1-201ENST00000574529 2389 ntBASIC1.08□□□□□ -2.24
COPAP53621 RNY1P13-201ENST00000365030 105 ntBASIC1.08□□□□□ -2.24
COPAP53621 SNORD113-1-201ENST00000365321 69 ntBASIC1.08□□□□□ -2.24
COPAP53621 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
COPAP53621 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
COPAP53621 MIR100-201ENST00000385259 80 ntBASIC1.08□□□□□ -2.24
COPAP53621 SNORD89-201ENST00000390981 114 ntBASIC1.08□□□□□ -2.24
COPAP53621 PDCD5P2-201ENST00000507570 312 ntBASIC1.08□□□□□ -2.24
COPAP53621 RNY4P6-201ENST00000363667 96 ntBASIC1.07□□□□□ -2.24
COPAP53621 SNORA19-201ENST00000384737 128 ntBASIC1.07□□□□□ -2.24
COPAP53621 RNU6-1154P-201ENST00000391001 104 ntBASIC1.07□□□□□ -2.24
COPAP53621 AC015818.7-201ENST00000428754 109 ntBASIC1.07□□□□□ -2.24
COPAP53621 AC087499.7-201ENST00000441958 109 ntBASIC1.07□□□□□ -2.24
COPAP53621 RPS29P1-201ENST00000465274 159 ntBASIC1.07□□□□□ -2.24
COPAP53621 FAM71BP1-201ENST00000604431 523 ntBASIC1.07□□□□□ -2.24
COPAP53621 Y_RNA.261-201ENST00000364631 102 ntBASIC1.06□□□□□ -2.24
COPAP53621 MT-TI-201ENST00000387365 69 ntBASIC1.06□□□□□ -2.24
COPAP53621 SNORD93-201ENST00000408813 74 ntBASIC1.06□□□□□ -2.24
COPAP53621 RNU7-185P-201ENST00000459215 60 ntBASIC1.06□□□□□ -2.24
COPAP53621 RNU6-313P-201ENST00000516317 112 ntBASIC1.06□□□□□ -2.24
COPAP53621 RNU6-479P-201ENST00000516348 105 ntBASIC1.06□□□□□ -2.24
COPAP53621 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
COPAP53621 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
COPAP53621 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
COPAP53621 RNU1-36P-201ENST00000365130 165 ntBASIC1.05□□□□□ -2.24
COPAP53621 MIR548A3-201ENST00000385297 97 ntBASIC1.05□□□□□ -2.24
COPAP53621 RNU6-1168P-201ENST00000390831 104 ntBASIC1.05□□□□□ -2.24
COPAP53621 MIR1827-201ENST00000408549 66 ntBASIC1.05□□□□□ -2.24
COPAP53621 U7.7-201ENST00000459276 60 ntBASIC1.05□□□□□ -2.24
COPAP53621 SNORD33.1-201ENST00000516213 88 ntBASIC1.05□□□□□ -2.24
COPAP53621 RNU6-977P-201ENST00000516411 103 ntBASIC1.05□□□□□ -2.24
COPAP53621 AL359881.1-201ENST00000602916 267 ntBASIC1.05□□□□□ -2.24
COPAP53621 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
COPAP53621 MIR6734-201ENST00000621166 68 ntBASIC1.05□□□□□ -2.24
COPAP53621 AL589743.1-201ENST00000551932 2712 ntBASIC1.05□□□□□ -2.24
COPAP53621 SNORD114-10-201ENST00000363409 72 ntBASIC1.04□□□□□ -2.24
COPAP53621 MIR548D2-201ENST00000384955 97 ntBASIC1.04□□□□□ -2.24
COPAP53621 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.04□□□□□ -2.24
COPAP53621 Y_RNA.649-201ENST00000459077 103 ntBASIC1.04□□□□□ -2.24
COPAP53621 RNA5SP255-201ENST00000516370 107 ntBASIC1.04□□□□□ -2.24
COPAP53621 RNU6-1110P-201ENST00000516462 101 ntBASIC1.04□□□□□ -2.24
COPAP53621 SNORD67.1-201ENST00000516618 108 ntBASIC1.04□□□□□ -2.24
COPAP53621 MIR4676-201ENST00000583078 72 ntBASIC1.04□□□□□ -2.24
COPAP53621 U2.22-201ENST00000636441 106 ntBASIC1.04□□□□□ -2.24
COPAP53621 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
COPAP53621 Y_RNA.563-201ENST00000384707 108 ntBASIC1.03□□□□□ -2.24
COPAP53621 U8.15-201ENST00000390947 134 ntBASIC1.03□□□□□ -2.24
COPAP53621 RNU6-735P-201ENST00000410612 107 ntBASIC1.03□□□□□ -2.24
COPAP53621 RNU2-51P-201ENST00000410708 197 ntBASIC1.03□□□□□ -2.24
COPAP53621 MIR1270-201ENST00000459320 83 ntBASIC1.03□□□□□ -2.24
COPAP53621 RNU7-137P-201ENST00000516788 62 ntBASIC1.03□□□□□ -2.24
COPAP53621 AL670379.3-201ENST00000605040 251 ntBASIC1.03□□□□□ -2.24
COPAP53621 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.03□□□□□ -2.24
COPAP53621 AC022709.1-201ENST00000615967 87 ntBASIC1.03□□□□□ -2.24
COPAP53621 MIR6788-201ENST00000618842 66 ntBASIC1.03□□□□□ -2.24
COPAP53621 AC087741.2-201ENST00000619415 172 ntBASIC1.03□□□□□ -2.24
COPAP53621 SNORD115-19-201ENST00000363098 82 ntBASIC1.02□□□□□ -2.25
COPAP53621 SNORD115-18-201ENST00000363293 82 ntBASIC1.02□□□□□ -2.25
COPAP53621 SNORD115-17-201ENST00000364612 82 ntBASIC1.02□□□□□ -2.25
COPAP53621 RNU6-616P-201ENST00000384353 107 ntBASIC1.02□□□□□ -2.25
COPAP53621 RNU6-364P-201ENST00000384387 107 ntBASIC1.02□□□□□ -2.25
COPAP53621 MIR125B2-201ENST00000385128 89 ntBASIC1.02□□□□□ -2.25
COPAP53621 AC133485.1-201ENST00000567176 124 ntBASIC1.02□□□□□ -2.25
COPAP53621 AC025627.3-201ENST00000582078 182 ntBASIC1.02□□□□□ -2.25
COPAP53621 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.02□□□□□ -2.25
COPAP53621 AC020891.4-201ENST00000605745 93 ntBASIC1.02□□□□□ -2.25
COPAP53621 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
COPAP53621 RNA5SP205-201ENST00000364653 136 ntBASIC1.01□□□□□ -2.25
COPAP53621 RNU6-1081P-201ENST00000384537 107 ntBASIC1.01□□□□□ -2.25
COPAP53621 MIR520F-201ENST00000384824 87 ntBASIC1.01□□□□□ -2.25
COPAP53621 MIR938-201ENST00000401216 83 ntBASIC1.01□□□□□ -2.25
COPAP53621 MIR548J-201ENST00000408833 112 ntBASIC1.01□□□□□ -2.25
COPAP53621 RNU4-83P-201ENST00000410863 133 ntBASIC1.01□□□□□ -2.25
COPAP53621 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
COPAP53621 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
COPAP53621 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
COPAP53621 RNU6-369P-201ENST00000362515 102 ntBASIC1□□□□□ -2.25
COPAP53621 RNU6-403P-201ENST00000363163 104 ntBASIC1□□□□□ -2.25
COPAP53621 Y_RNA.353-201ENST00000365440 108 ntBASIC1□□□□□ -2.25
COPAP53621 MIR206-201ENST00000384872 86 ntBASIC1□□□□□ -2.25
COPAP53621 RNU6-447P-201ENST00000410293 104 ntBASIC1□□□□□ -2.25
COPAP53621 RNU6-1118P-201ENST00000410382 104 ntBASIC1□□□□□ -2.25
COPAP53621 RNU6-1076P-201ENST00000410397 104 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms