Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.38□□□□□ -2.03
RNF144AP50876 RN7SL274P-201ENST00000492268 272 ntBASIC2.38□□□□□ -2.03
RNF144AP50876 MIR4491-201ENST00000581087 68 ntBASIC2.38□□□□□ -2.03
RNF144AP50876 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
RNF144AP50876 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.37□□□□□ -2.03
RNF144AP50876 RNU6-859P-201ENST00000362728 107 ntBASIC2.37□□□□□ -2.03
RNF144AP50876 RNU6-957P-201ENST00000363652 99 ntBASIC2.37□□□□□ -2.03
RNF144AP50876 MT-TN-201ENST00000387400 73 ntBASIC2.37□□□□□ -2.03
RNF144AP50876 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RNF144AP50876 SNORD63B-201ENST00000411005 70 ntBASIC2.37□□□□□ -2.03
RNF144AP50876 RPL30P7-201ENST00000479312 323 ntBASIC2.37□□□□□ -2.03
RNF144AP50876 RNA5SP356-201ENST00000515972 94 ntBASIC2.37□□□□□ -2.03
RNF144AP50876 SNORA25.16-201ENST00000516741 121 ntBASIC2.37□□□□□ -2.03
RNF144AP50876 MIR5092-201ENST00000583139 88 ntBASIC2.37□□□□□ -2.03
RNF144AP50876 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
RNF144AP50876 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RNF144AP50876 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF144AP50876 Y_RNA.340-201ENST00000365330 92 ntBASIC2.36□□□□□ -2.03
RNF144AP50876 MIR196B-201ENST00000384852 84 ntBASIC2.36□□□□□ -2.03
RNF144AP50876 SNORD93-201ENST00000408813 74 ntBASIC2.36□□□□□ -2.03
RNF144AP50876 MIR3162-201ENST00000581818 82 ntBASIC2.36□□□□□ -2.03
RNF144AP50876 GHRLOS.1-201ENST00000610995 70 ntBASIC2.36□□□□□ -2.03
RNF144AP50876 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF144AP50876 SNORA67.4-201ENST00000384688 142 ntBASIC2.35□□□□□ -2.03
RNF144AP50876 MIR518E-201ENST00000385252 88 ntBASIC2.35□□□□□ -2.03
RNF144AP50876 RNU6-687P-201ENST00000516443 89 ntBASIC2.35□□□□□ -2.03
RNF144AP50876 RNU6-303P-201ENST00000517091 106 ntBASIC2.35□□□□□ -2.03
RNF144AP50876 MIR5694-201ENST00000581190 76 ntBASIC2.35□□□□□ -2.03
RNF144AP50876 uc_338.6-201ENST00000613544 171 ntBASIC2.35□□□□□ -2.03
RNF144AP50876 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF144AP50876 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RNF144AP50876 AC062016.1-201ENST00000355719 319 ntBASIC2.34□□□□□ -2.03
RNF144AP50876 MIR520H-201ENST00000385126 88 ntBASIC2.34□□□□□ -2.03
RNF144AP50876 RNA5SP184-201ENST00000411071 108 ntBASIC2.34□□□□□ -2.03
RNF144AP50876 RNU6-634P-201ENST00000459134 106 ntBASIC2.34□□□□□ -2.03
RNF144AP50876 MIR6516-201ENST00000630554 81 ntBASIC2.34□□□□□ -2.03
RNF144AP50876 Y_RNA.12-201ENST00000362393 112 ntBASIC2.33□□□□□ -2.04
RNF144AP50876 RNU5F-1-201ENST00000362507 117 ntBASIC2.33□□□□□ -2.04
RNF144AP50876 RNU6-403P-201ENST00000363163 104 ntBASIC2.33□□□□□ -2.04
RNF144AP50876 RNU6-439P-201ENST00000384188 106 ntBASIC2.33□□□□□ -2.04
RNF144AP50876 RNU6-1194P-201ENST00000516208 104 ntBASIC2.33□□□□□ -2.04
RNF144AP50876 RNA5SP320-201ENST00000516263 124 ntBASIC2.33□□□□□ -2.04
RNF144AP50876 RNA5SP282-201ENST00000516355 108 ntBASIC2.33□□□□□ -2.04
RNF144AP50876 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
RNF144AP50876 MIR664A-201ENST00000626086 82 ntBASIC2.33□□□□□ -2.04
RNF144AP50876 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
RNF144AP50876 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNF144AP50876 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNF144AP50876 RNA5SP276-201ENST00000362580 94 ntBASIC2.32□□□□□ -2.04
RNF144AP50876 SNORD90-201ENST00000391145 111 ntBASIC2.32□□□□□ -2.04
RNF144AP50876 RNU6-587P-201ENST00000391282 106 ntBASIC2.32□□□□□ -2.04
RNF144AP50876 AL133373.1-201ENST00000497098 94 ntBASIC2.32□□□□□ -2.04
RNF144AP50876 RNA5SP402-201ENST00000517148 110 ntBASIC2.32□□□□□ -2.04
RNF144AP50876 MIR4513-201ENST00000581077 86 ntBASIC2.32□□□□□ -2.04
RNF144AP50876 MIR6852-201ENST00000621699 66 ntBASIC2.32□□□□□ -2.04
RNF144AP50876 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.32□□□□□ -2.04
RNF144AP50876 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNF144AP50876 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
RNF144AP50876 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RNF144AP50876 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RNF144AP50876 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RNF144AP50876 MIR101-2-201ENST00000362195 79 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 RNU6-649P-201ENST00000384463 107 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 Y_RNA.500-201ENST00000384466 111 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 MIR144-201ENST00000384886 86 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 RNA5SP212-201ENST00000391223 107 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 Y_RNA.588-201ENST00000391254 102 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 AC074348.1-201ENST00000426503 132 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 snoU13.25-201ENST00000458945 104 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 RNU2-19P-201ENST00000517288 84 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 YWHAEP2-201ENST00000580066 112 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 YWHAEP3-201ENST00000582767 121 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.31□□□□□ -2.04
RNF144AP50876 ZNF658B-202ENST00000615961 3375 ntBASIC2.31□□□□□ -2.04
RNF144AP50876 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
RNF144AP50876 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
RNF144AP50876 RNU1-36P-201ENST00000365130 165 ntBASIC2.3□□□□□ -2.04
RNF144AP50876 SNORD100-201ENST00000408573 76 ntBASIC2.3□□□□□ -2.04
RNF144AP50876 Y_RNA.596-201ENST00000410462 109 ntBASIC2.3□□□□□ -2.04
RNF144AP50876 MIR18B-201ENST00000454574 71 ntBASIC2.3□□□□□ -2.04
RNF144AP50876 RNU11-2P-201ENST00000516898 142 ntBASIC2.3□□□□□ -2.04
RNF144AP50876 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RNF144AP50876 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RNF144AP50876 MIR377-201ENST00000362145 69 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 RNU6-654P-201ENST00000364373 107 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 SNORD114-30-201ENST00000364448 72 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 Y_RNA.536-201ENST00000384621 113 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 MIR1185-1-201ENST00000408598 86 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 RNA5SP95-201ENST00000410319 137 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 RNU7-195P-201ENST00000458793 62 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 UBE2DNL-203ENST00000474922 222 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 RNA5SP148-201ENST00000516527 94 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 RNU6-250P-201ENST00000516958 103 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 MIR4672-201ENST00000583126 81 ntBASIC2.29□□□□□ -2.04
RNF144AP50876 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RNF144AP50876 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
RNF144AP50876 MIR103A2-201ENST00000362154 78 ntBASIC2.28□□□□□ -2.04
RNF144AP50876 SNORD30.1-201ENST00000391309 70 ntBASIC2.28□□□□□ -2.04
RNF144AP50876 snoU13.17-201ENST00000458802 104 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms