Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 RNU6-447P-201ENST00000410293 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 RNU6-1118P-201ENST00000410382 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 RNU6-1076P-201ENST00000410397 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 RNU6-355P-201ENST00000410427 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 RNU6-791P-201ENST00000410467 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 RNU6-705P-201ENST00000410601 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 RNU6-1100P-201ENST00000410691 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 RNU6-860P-201ENST00000410860 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 RNU6-1217P-201ENST00000411276 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 RNU6-785P-201ENST00000411324 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 SNORA31.2-201ENST00000516019 134 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 AC141846.1-201ENST00000568348 142 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 U6.90-201ENST00000614007 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 MIR6740-201ENST00000618268 113 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 U6.70-201ENST00000620287 104 ntBASIC1.11□□□□□ -2.23
PDLIM4P50479 MIR30D-201ENST00000362283 70 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 Y_RNA.116-201ENST00000363292 103 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 Y_RNA.163-201ENST00000363702 113 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 Y_RNA.224-201ENST00000364308 111 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 Y_RNA.363-201ENST00000365529 113 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 Y_RNA.507-201ENST00000384500 99 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 RNU6-816P-201ENST00000390914 107 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 RNU6-1268P-201ENST00000391214 107 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 RNU6-1239P-201ENST00000391310 107 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 MIR1302-5-201ENST00000408164 150 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 MIR1276-201ENST00000408707 83 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 MIR18B-201ENST00000454574 71 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 MIR1255B1-201ENST00000636325 63 ntBASIC1.1□□□□□ -2.23
PDLIM4P50479 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
PDLIM4P50479 Y_RNA.191-201ENST00000363972 113 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 Y_RNA.377-201ENST00000365644 108 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 SNORA32-201ENST00000384072 121 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 MIR518E-201ENST00000385252 88 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 MIR758-201ENST00000390227 88 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 SNORA40.6-201ENST00000391153 128 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 RNU6-1165P-201ENST00000410119 107 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 RNA5SP237-201ENST00000410414 113 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 RNU6-554P-201ENST00000410466 106 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 AL353813.1-201ENST00000440700 253 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 RNU7-21P-201ENST00000459430 62 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 RNU7-2P-201ENST00000516096 62 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 RNU7-137P-201ENST00000516788 62 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 MIR3660-201ENST00000584845 100 ntBASIC1.09□□□□□ -2.23
PDLIM4P50479 RNU6-766P-201ENST00000362478 107 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 RNU6-1313P-201ENST00000362622 102 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 SNORA63.4-201ENST00000362763 126 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 RNU6-654P-201ENST00000364373 107 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 RNU6-409P-201ENST00000384114 104 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 RNU6-1113P-201ENST00000384348 107 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 RNU6-733P-201ENST00000410759 104 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 RNU7-62P-201ENST00000458856 62 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 RNA5SP102-201ENST00000516865 106 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 AC036111.3-201ENST00000526389 112 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 AC068338.1-201ENST00000565567 176 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 MIR4694-201ENST00000578534 80 ntBASIC1.08□□□□□ -2.24
PDLIM4P50479 SNORD113.3-201ENST00000364630 78 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 SNORA25.8-201ENST00000364831 128 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 Y_RNA.328-201ENST00000365208 113 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 RNU6-53P-201ENST00000365367 106 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 RNU6-147P-201ENST00000383983 107 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 MIR206-201ENST00000384872 86 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 RNU6-679P-201ENST00000391003 106 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 SNORD111-201ENST00000408139 94 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 RPL39P25-201ENST00000449384 154 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 AL031737.1-201ENST00000450125 223 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 AC004223.1-201ENST00000479840 271 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 SNORD67.1-201ENST00000516618 108 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 RNU6-521P-201ENST00000516663 105 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 RNU6-537P-201ENST00000517277 103 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 SNORA4-201ENST00000584302 138 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 AC106800.4-201ENST00000614905 153 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 AC012676.2-201ENST00000619258 186 ntBASIC1.07□□□□□ -2.24
PDLIM4P50479 AL391516.1-201ENST00000554380 2449 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 RNY3P2-201ENST00000362918 102 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 RNU6-1099P-201ENST00000363533 107 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 Y_RNA.360-201ENST00000365512 102 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 RNU6-910P-201ENST00000390844 107 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 RNU6-904P-201ENST00000516206 101 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 SNORA70.22-201ENST00000517160 124 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 uc_338.28-201ENST00000612082 187 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
PDLIM4P50479 RNY1P2-201ENST00000364820 117 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 Y_RNA.330-201ENST00000365230 109 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 Y_RNA.355-201ENST00000365462 98 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 RNU6-1237P-201ENST00000384777 107 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 RNU6-205P-201ENST00000390858 107 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 AC096949.1-201ENST00000412047 152 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 RNU7-90P-201ENST00000459216 62 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 RNU6-158P-201ENST00000517104 100 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 AC019288.1-201ENST00000557918 224 ntBASIC1.05□□□□□ -2.24
PDLIM4P50479 MIR3613-201ENST00000579844 87 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms