Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLCN1P35523 MIR1185-1-201ENST00000408598 86 ntBASIC2.64□□□□□ -1.99
CLCN1P35523 AC008413.1-201ENST00000511864 177 ntBASIC2.64□□□□□ -1.99
CLCN1P35523 RNU11-2P-201ENST00000516898 142 ntBASIC2.64□□□□□ -1.99
CLCN1P35523 SNRPGP19-201ENST00000603826 189 ntBASIC2.64□□□□□ -1.99
CLCN1P35523 MIR7843-201ENST00000622274 79 ntBASIC2.64□□□□□ -1.99
CLCN1P35523 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLCN1P35523 RNU4-32P-201ENST00000363404 141 ntBASIC2.63□□□□□ -1.99
CLCN1P35523 RNA5SP68-201ENST00000363885 119 ntBASIC2.63□□□□□ -1.99
CLCN1P35523 RNU6-1296P-201ENST00000383879 107 ntBASIC2.63□□□□□ -1.99
CLCN1P35523 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.63□□□□□ -1.99
CLCN1P35523 AC245517.4-201ENST00000448601 281 ntBASIC2.63□□□□□ -1.99
CLCN1P35523 AC023790.1-201ENST00000482174 347 ntBASIC2.63□□□□□ -1.99
CLCN1P35523 AL512598.1-201ENST00000610158 273 ntBASIC2.63□□□□□ -1.99
CLCN1P35523 uc_338.6-201ENST00000613544 171 ntBASIC2.63□□□□□ -1.99
CLCN1P35523 RNA5SP264-201ENST00000363115 107 ntBASIC2.62□□□□□ -1.99
CLCN1P35523 SNORA70B-201ENST00000384210 135 ntBASIC2.62□□□□□ -1.99
CLCN1P35523 MIR1236-201ENST00000408340 102 ntBASIC2.62□□□□□ -1.99
CLCN1P35523 snoU13.9-201ENST00000458927 103 ntBASIC2.62□□□□□ -1.99
CLCN1P35523 SNORD4B-201ENST00000459083 72 ntBASIC2.62□□□□□ -1.99
CLCN1P35523 AP003716.2-201ENST00000528260 108 ntBASIC2.62□□□□□ -1.99
CLCN1P35523 MIR377-201ENST00000362145 69 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 RNU6-654P-201ENST00000364373 107 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CLCN1P35523 RNA5SP95-201ENST00000410319 137 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 RNA5SP148-201ENST00000516527 94 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 MIR514B-201ENST00000516774 80 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 AC019176.1-201ENST00000518519 225 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 MIR4524B-201ENST00000581569 115 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 MIR6817-201ENST00000615588 66 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 U4.3-201ENST00000621047 82 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 uc_338.20-201ENST00000621563 178 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 MIR4662A-201ENST00000637499 67 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 AC008163.1-202ENST00000636004 2889 ntBASIC2.61□□□□□ -1.99
CLCN1P35523 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLCN1P35523 RNU6-53P-201ENST00000365367 106 ntBASIC2.6□□□□□ -1.99
CLCN1P35523 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.6□□□□□ -1.99
CLCN1P35523 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.6□□□□□ -1.99
CLCN1P35523 AC005908.1-201ENST00000468701 347 ntBASIC2.6□□□□□ -1.99
CLCN1P35523 RNU7-153P-201ENST00000516455 62 ntBASIC2.6□□□□□ -1.99
CLCN1P35523 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.6□□□□□ -1.99
CLCN1P35523 SNORA72.6-201ENST00000384520 129 ntBASIC2.59□□□□□ -1.99
CLCN1P35523 MIR504-201ENST00000385065 83 ntBASIC2.59□□□□□ -1.99
CLCN1P35523 AL359511.1-201ENST00000402970 211 ntBASIC2.59□□□□□ -1.99
CLCN1P35523 Y_RNA.648-201ENST00000459455 110 ntBASIC2.59□□□□□ -1.99
CLCN1P35523 AC140658.3-201ENST00000567603 271 ntBASIC2.59□□□□□ -1.99
CLCN1P35523 AL161722.3-201ENST00000605789 2983 ntBASIC2.58□□□□□ -2
CLCN1P35523 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
CLCN1P35523 Y_RNA.94-201ENST00000363068 106 ntBASIC2.58□□□□□ -2
CLCN1P35523 SNORD93-201ENST00000408813 74 ntBASIC2.58□□□□□ -2
CLCN1P35523 AC079140.2-201ENST00000506193 142 ntBASIC2.58□□□□□ -2
CLCN1P35523 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.58□□□□□ -2
CLCN1P35523 MIR4769-201ENST00000584126 77 ntBASIC2.58□□□□□ -2
CLCN1P35523 AC016717.2-201ENST00000609089 5141 ntBASIC2.58□□□□□ -2
CLCN1P35523 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CLCN1P35523 RNU7-85P-201ENST00000458851 63 ntBASIC2.57□□□□□ -2
CLCN1P35523 snoU13.26-201ENST00000459452 105 ntBASIC2.57□□□□□ -2
CLCN1P35523 RNU6-531P-201ENST00000516694 104 ntBASIC2.57□□□□□ -2
CLCN1P35523 MIR4712-201ENST00000583750 82 ntBASIC2.57□□□□□ -2
CLCN1P35523 MIR5002-201ENST00000584713 97 ntBASIC2.57□□□□□ -2
CLCN1P35523 AC103810.8-201ENST00000607347 118 ntBASIC2.57□□□□□ -2
CLCN1P35523 RNU4-58P-201ENST00000363192 141 ntBASIC2.56□□□□□ -2
CLCN1P35523 SNORD1A-201ENST00000364968 72 ntBASIC2.56□□□□□ -2
CLCN1P35523 HMGN2P23-201ENST00000456759 269 ntBASIC2.56□□□□□ -2
CLCN1P35523 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
CLCN1P35523 SNORA25.16-201ENST00000516741 121 ntBASIC2.56□□□□□ -2
CLCN1P35523 SNORA44.1-201ENST00000517031 108 ntBASIC2.56□□□□□ -2
CLCN1P35523 MIR3937-201ENST00000580135 106 ntBASIC2.56□□□□□ -2
CLCN1P35523 MIR4491-201ENST00000581087 68 ntBASIC2.56□□□□□ -2
CLCN1P35523 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.56□□□□□ -2
CLCN1P35523 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLCN1P35523 MIR302D-201ENST00000362275 68 ntBASIC2.55□□□□□ -2
CLCN1P35523 U8.2-201ENST00000363156 134 ntBASIC2.55□□□□□ -2
CLCN1P35523 SNORD114-30-201ENST00000364448 72 ntBASIC2.55□□□□□ -2
CLCN1P35523 SNORA67.3-201ENST00000384366 140 ntBASIC2.55□□□□□ -2
CLCN1P35523 RNU6-1065P-201ENST00000384513 106 ntBASIC2.55□□□□□ -2
CLCN1P35523 MIR17-201ENST00000385012 84 ntBASIC2.55□□□□□ -2
CLCN1P35523 MIR30A-201ENST00000385092 71 ntBASIC2.55□□□□□ -2
CLCN1P35523 MIR18B-201ENST00000454574 71 ntBASIC2.55□□□□□ -2
CLCN1P35523 SNORA25.13-201ENST00000516395 103 ntBASIC2.55□□□□□ -2
CLCN1P35523 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLCN1P35523 SNORD33-201ENST00000362761 85 ntBASIC2.54□□□□□ -2
CLCN1P35523 RNU6-403P-201ENST00000363163 104 ntBASIC2.54□□□□□ -2
CLCN1P35523 RNU6-776P-201ENST00000364403 104 ntBASIC2.54□□□□□ -2
CLCN1P35523 RNU6-1022P-201ENST00000365049 104 ntBASIC2.54□□□□□ -2
CLCN1P35523 MIR516A2-201ENST00000384888 90 ntBASIC2.54□□□□□ -2
CLCN1P35523 MIR516A1-201ENST00000385033 90 ntBASIC2.54□□□□□ -2
CLCN1P35523 RNU6-243P-201ENST00000391140 107 ntBASIC2.54□□□□□ -2
CLCN1P35523 RNU6-1254P-201ENST00000391266 104 ntBASIC2.54□□□□□ -2
CLCN1P35523 AC025033.1-201ENST00000463883 194 ntBASIC2.54□□□□□ -2
CLCN1P35523 AC046143.2-201ENST00000609789 160 ntBASIC2.54□□□□□ -2
CLCN1P35523 MIR1291-201ENST00000627649 87 ntBASIC2.54□□□□□ -2
CLCN1P35523 AC080100.1-201ENST00000624239 5356 ntBASIC2.54□□□□□ -2
CLCN1P35523 AL359851.1-201ENST00000569460 4997 ntBASIC2.53□□□□□ -2
CLCN1P35523 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLCN1P35523 snoU13.11-201ENST00000459219 104 ntBASIC2.53□□□□□ -2
CLCN1P35523 RNA5SP24-201ENST00000516478 95 ntBASIC2.53□□□□□ -2
CLCN1P35523 RNU1-40P-201ENST00000516816 164 ntBASIC2.53□□□□□ -2
CLCN1P35523 RNU1-97P-201ENST00000516872 164 ntBASIC2.53□□□□□ -2
CLCN1P35523 RNA5SP364-201ENST00000516938 78 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms