Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU6-765P-201ENST00000516916 99 ntBASIC0.05□□□□□ -2.4
SCN4AP35499 RNU2-60P-201ENST00000517290 128 ntBASIC0.05□□□□□ -2.4
SCN4AP35499 AC138749.4-201ENST00000563970 127 ntBASIC0.05□□□□□ -2.4
SCN4AP35499 Y_RNA.757-201ENST00000578934 114 ntBASIC0.05□□□□□ -2.4
SCN4AP35499 MIR4500-201ENST00000579472 76 ntBASIC0.05□□□□□ -2.4
SCN4AP35499 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.05□□□□□ -2.4
SCN4AP35499 SNORD114-10-201ENST00000363409 72 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 RNY4P28-201ENST00000365281 93 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 SNORD24-201ENST00000383884 75 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 Y_RNA.440-201ENST00000384120 114 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 AC069271.1-201ENST00000445577 156 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 AL121914.1-201ENST00000450188 156 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 RNU7-45P-201ENST00000459460 63 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 RNA5SP236-201ENST00000516169 116 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 AC141557.1-201ENST00000540982 400 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 MIR5197-201ENST00000583721 112 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 AC011921.3-201ENST00000605540 361 ntBASIC0.04□□□□□ -2.4
SCN4AP35499 Y_RNA.75-201ENST00000362927 97 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 RNU6-514P-201ENST00000384208 107 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 Y_RNA.531-201ENST00000384589 121 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 RNU6-493P-201ENST00000391321 108 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 MIR892B-201ENST00000401279 77 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 AP001180.6-201ENST00000584918 159 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 AC021613.1-201ENST00000623880 111 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 AC091304.10-201ENST00000641554 121 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 MIRLET7D-201ENST00000362263 87 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 RNA5SP133-201ENST00000363368 119 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 Y_RNA.396-201ENST00000383949 103 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 Y_RNA.539-201ENST00000384635 107 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 MIR610-201ENST00000385139 96 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 RNU6-1190P-201ENST00000410811 104 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 AC009779.6-201ENST00000603972 165 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 RNU2-4P-201ENST00000606190 192 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 AL365265.1-201ENST00000621045 234 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 MIR6844-201ENST00000637122 62 ntBASIC0.03□□□□□ -2.4
SCN4AP35499 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.03□□□□□ -2.4
SCN4AP35499 Y_RNA.470-201ENST00000384307 117 ntBASIC0.02□□□□□ -2.41
SCN4AP35499 Y_RNA.588-201ENST00000391254 102 ntBASIC0.02□□□□□ -2.41
SCN4AP35499 RNU4-83P-201ENST00000410863 133 ntBASIC0.02□□□□□ -2.41
SCN4AP35499 RNA5SP268-201ENST00000516828 124 ntBASIC0.02□□□□□ -2.41
SCN4AP35499 Y_RNA.49-201ENST00000362714 112 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 Y_RNA.350-201ENST00000365409 98 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 SNORD58.1-201ENST00000391313 66 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 AC141846.1-201ENST00000568348 142 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 AC073869.9-201ENST00000641610 120 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 SNORD115-2-201ENST00000362842 82 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 SNORD115-20-201ENST00000365099 82 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 RNU6-768P-201ENST00000384683 107 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 RNU6-588P-201ENST00000410281 105 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 SNORD67.1-201ENST00000516618 108 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 RNU6-531P-201ENST00000516694 104 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 SNORA25.16-201ENST00000516741 121 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 MIR3646-201ENST00000578301 84 ntBASIC0.01□□□□□ -2.41
SCN4AP35499 RNU6-449P-201ENST00000383914 107 ntBASIC0□□□□□ -2.41
SCN4AP35499 RNU6-815P-201ENST00000384080 113 ntBASIC0□□□□□ -2.41
SCN4AP35499 RNU6-782P-201ENST00000516852 104 ntBASIC0□□□□□ -2.41
SCN4AP35499 RNA5SP47-201ENST00000517230 109 ntBASIC0□□□□□ -2.41
SCN4AP35499 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 SNORD27-201ENST00000363981 72 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 MIR5706-201ENST00000579841 80 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 MIR4743-201ENST00000584576 69 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 AC021443.1-201ENST00000604478 211 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 U6.104-201ENST00000637979 90 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 RNA5SP98-201ENST00000363158 137 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 RNU6-312P-201ENST00000364629 107 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 IGLVI-20-201ENST00000519296 130 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 DEFB131E-201ENST00000532329 154 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 MIR4493-201ENST00000584016 73 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 MIR1295B-201ENST00000636144 60 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 MIR6828-201ENST00000636181 60 ntBASIC-0.01□□□□□ -2.41
SCN4AP35499 RNU6-309P-201ENST00000364573 106 ntBASIC-0.02□□□□□ -2.41
SCN4AP35499 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.02□□□□□ -2.41
SCN4AP35499 SNORD18B-201ENST00000365659 72 ntBASIC-0.02□□□□□ -2.41
SCN4AP35499 MIR593-201ENST00000384856 100 ntBASIC-0.02□□□□□ -2.41
SCN4AP35499 SNORD114-12-201ENST00000365400 75 ntBASIC-0.03□□□□□ -2.41
SCN4AP35499 RNU4-71P-201ENST00000516258 113 ntBASIC-0.03□□□□□ -2.41
SCN4AP35499 AL117187.1-201ENST00000555482 181 ntBASIC-0.03□□□□□ -2.41
SCN4AP35499 AC138907.4-201ENST00000570107 226 ntBASIC-0.03□□□□□ -2.41
SCN4AP35499 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.03□□□□□ -2.41
SCN4AP35499 AC108676.2-201ENST00000605225 163 ntBASIC-0.03□□□□□ -2.41
SCN4AP35499 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.03□□□□□ -2.41
SCN4AP35499 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.03□□□□□ -2.41
SCN4AP35499 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.03□□□□□ -2.41
SCN4AP35499 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.03□□□□□ -2.41
SCN4AP35499 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.03□□□□□ -2.41
SCN4AP35499 SNORD115-35-201ENST00000365122 82 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 MIR548H2-201ENST00000408874 88 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 RNU7-48P-201ENST00000458875 63 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 TRAJ51-201ENST00000504127 63 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 MTND1P19-201ENST00000511780 315 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 RNU7-161P-201ENST00000517289 62 ntBASIC-0.03□□□□□ -2.42
SCN4AP35499 IGKV1-22-201ENST00000524313 326 ntBASIC-0.03□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms