Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SNORD115-2-201ENST00000362842 82 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 RNU4-58P-201ENST00000363192 141 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 SNORA63.5-201ENST00000363548 123 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 SNORA25.7-201ENST00000364375 127 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 RNU6-923P-201ENST00000364753 107 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 SNORD115-20-201ENST00000365099 82 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 MIR606-201ENST00000384851 96 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 MIR760-201ENST00000390220 80 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 RNU6-127P-201ENST00000390897 107 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 RNU7-113P-201ENST00000459273 62 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 RNA5SP236-201ENST00000516169 116 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 DEFB131E-201ENST00000532329 154 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 U6.109-201ENST00000636749 87 ntBASIC-0.03□□□□□ -2.41
SHMT2P34897 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 RNU6-275P-201ENST00000364910 107 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 MTND2P23-201ENST00000422990 651 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 RNU7-129P-201ENST00000516128 62 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 MIR4752-201ENST00000579672 72 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.04□□□□□ -2.42
SHMT2P34897 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.04□□□□□ -2.42
SHMT2P34897 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 SNORA32-201ENST00000384072 121 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 SNORD58.1-201ENST00000391313 66 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 AL022718.1-201ENST00000412004 84 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 RNA5SP33-201ENST00000516687 98 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 RNU7-137P-201ENST00000516788 62 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 AC138749.4-201ENST00000563970 127 ntBASIC-0.05□□□□□ -2.42
SHMT2P34897 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.05□□□□□ -2.42
SHMT2P34897 SNORD27-201ENST00000363981 72 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 RNA5SP128-201ENST00000365305 116 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 RNU6-756P-201ENST00000383997 107 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 RNU4-70P-201ENST00000384579 139 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 MIR5190-201ENST00000581537 80 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 AC008737.2-201ENST00000599446 118 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 AL359881.1-201ENST00000602916 267 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 AC098479.1-201ENST00000609225 154 ntBASIC-0.06□□□□□ -2.42
SHMT2P34897 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 RNU6-702P-201ENST00000364982 107 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 AC108059.2-201ENST00000434626 151 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 AC244505.6-201ENST00000452829 130 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 SNORD67.1-201ENST00000516618 108 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 MIR548AE2-201ENST00000583456 67 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 U6.106-201ENST00000636360 105 ntBASIC-0.07□□□□□ -2.42
SHMT2P34897 MIR101-2-201ENST00000362195 79 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 RNU6-161P-201ENST00000363051 106 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 MIR643-201ENST00000385267 97 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.08□□□□□ -2.42
SHMT2P34897 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 SNORD115-24-201ENST00000363528 82 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 RNA5SP457-201ENST00000363657 124 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 RNU6-726P-201ENST00000364680 107 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 RNU6-738P-201ENST00000384531 106 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 MIR145-201ENST00000384967 88 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 MIR610-201ENST00000385139 96 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SHMT2P34897 RPL39P34-201ENST00000477141 156 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 RNU2-35P-201ENST00000516446 142 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 AL109933.3-201ENST00000619095 188 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 MIR499B-201ENST00000636498 73 ntBASIC-0.09□□□□□ -2.42
SHMT2P34897 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 SNORD114-10-201ENST00000363409 72 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 SNORA63-201ENST00000363450 132 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 RNY1P2-201ENST00000364820 117 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 RNU6-690P-201ENST00000365242 106 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 RNU6-768P-201ENST00000384683 107 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 MIR1270-201ENST00000459320 83 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 MIR4305-201ENST00000583252 102 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 AL360085.1-201ENST00000604713 532 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 MIR2909-201ENST00000617113 69 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 AL162376.1-201ENST00000624117 175 ntBASIC-0.1□□□□□ -2.43
SHMT2P34897 RNA5SP325-201ENST00000363756 130 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 MIR593-201ENST00000384856 100 ntBASIC-0.11□□□□□ -2.43
SHMT2P34897 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms