Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 Y_RNA.54-201ENST00000362766 105 ntBASIC-3.06□□□□□ -2.9
HMGA1P17096 RNU6-517P-201ENST00000384362 110 ntBASIC-3.06□□□□□ -2.9
HMGA1P17096 AL606923.1-201ENST00000406616 190 ntBASIC-3.06□□□□□ -2.9
HMGA1P17096 DLEU2_5.1-201ENST00000615567 84 ntBASIC-3.06□□□□□ -2.9
HMGA1P17096 RNU6-690P-201ENST00000365242 106 ntBASIC-3.07□□□□□ -2.9
HMGA1P17096 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.07□□□□□ -2.9
HMGA1P17096 Y_RNA.364-201ENST00000365532 101 ntBASIC-3.07□□□□□ -2.9
HMGA1P17096 SNORD19-201ENST00000391191 68 ntBASIC-3.07□□□□□ -2.9
HMGA1P17096 Y_RNA.708-201ENST00000516950 96 ntBASIC-3.07□□□□□ -2.9
HMGA1P17096 AC092954.2-201ENST00000609103 430 ntBASIC-3.07□□□□□ -2.9
HMGA1P17096 AC090617.8-201ENST00000623339 167 ntBASIC-3.07□□□□□ -2.9
HMGA1P17096 U6.96-201ENST00000636425 70 ntBASIC-3.07□□□□□ -2.9
HMGA1P17096 RNU7-141P-201ENST00000459304 62 ntBASIC-3.08□□□□□ -2.9
HMGA1P17096 RNU6-559P-201ENST00000516151 98 ntBASIC-3.08□□□□□ -2.9
HMGA1P17096 RNU6-1057P-201ENST00000517162 102 ntBASIC-3.08□□□□□ -2.9
HMGA1P17096 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-3.08□□□□□ -2.9
HMGA1P17096 RNU5F-7P-201ENST00000363696 115 ntBASIC-3.09□□□□□ -2.9
HMGA1P17096 MTND1P34-201ENST00000438556 671 ntBASIC-3.09□□□□□ -2.9
HMGA1P17096 SNORD42B-201ENST00000458893 67 ntBASIC-3.09□□□□□ -2.9
HMGA1P17096 AC022878.1-201ENST00000530684 149 ntBASIC-3.09□□□□□ -2.9
HMGA1P17096 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-3.09□□□□□ -2.9
HMGA1P17096 AC005014.3-201ENST00000605985 190 ntBASIC-3.09□□□□□ -2.9
HMGA1P17096 AL589826.1-201ENST00000340697 249 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 RNU6-774P-201ENST00000363238 107 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 RNU6-501P-201ENST00000364072 100 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 SNORD115-31-201ENST00000365318 82 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 RNU5E-5P-201ENST00000365379 116 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 SNORA72.4-201ENST00000384174 132 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 Y_RNA.448-201ENST00000384185 108 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 Y_RNA.613-201ENST00000410726 97 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 RNU6-365P-201ENST00000517113 106 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 RNU6-1238P-201ENST00000517215 102 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 AP002963.1-201ENST00000530590 184 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 MIR548W-201ENST00000581970 74 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 AC024933.1-201ENST00000608472 348 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 AL359880.1-201ENST00000621879 266 ntBASIC-3.1□□□□□ -2.91
HMGA1P17096 Y_RNA.515-201ENST00000384535 112 ntBASIC-3.11□□□□□ -2.91
HMGA1P17096 RNU7-48P-201ENST00000458875 63 ntBASIC-3.11□□□□□ -2.91
HMGA1P17096 RNU7-113P-201ENST00000459273 62 ntBASIC-3.11□□□□□ -2.91
HMGA1P17096 RNU6-415P-201ENST00000516252 97 ntBASIC-3.11□□□□□ -2.91
HMGA1P17096 RNU6-126P-201ENST00000516685 103 ntBASIC-3.11□□□□□ -2.91
HMGA1P17096 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.12□□□□□ -2.91
HMGA1P17096 Y_RNA.72-201ENST00000362894 103 ntBASIC-3.12□□□□□ -2.91
HMGA1P17096 RNU6-595P-201ENST00000363944 107 ntBASIC-3.12□□□□□ -2.91
HMGA1P17096 Y_RNA.372-201ENST00000365599 102 ntBASIC-3.12□□□□□ -2.91
HMGA1P17096 Y_RNA.378-201ENST00000365652 113 ntBASIC-3.12□□□□□ -2.91
HMGA1P17096 Y_RNA.380-201ENST00000365663 111 ntBASIC-3.12□□□□□ -2.91
HMGA1P17096 snoU109.3-201ENST00000459477 145 ntBASIC-3.12□□□□□ -2.91
HMGA1P17096 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.12□□□□□ -2.91
HMGA1P17096 RNU6-282P-201ENST00000365357 103 ntBASIC-3.13□□□□□ -2.91
HMGA1P17096 RNU6-383P-201ENST00000410864 94 ntBASIC-3.13□□□□□ -2.91
HMGA1P17096 AL035461.1-201ENST00000421490 332 ntBASIC-3.13□□□□□ -2.91
HMGA1P17096 AL160004.2-201ENST00000432935 350 ntBASIC-3.13□□□□□ -2.91
HMGA1P17096 MIR4273-201ENST00000582824 84 ntBASIC-3.13□□□□□ -2.91
HMGA1P17096 RNU6-82P-201ENST00000363970 107 ntBASIC-3.14□□□□□ -2.91
HMGA1P17096 Y_RNA.298-201ENST00000364960 107 ntBASIC-3.14□□□□□ -2.91
HMGA1P17096 snoU13.10-201ENST00000459301 103 ntBASIC-3.14□□□□□ -2.91
HMGA1P17096 AC091951.2-201ENST00000500762 203 ntBASIC-3.14□□□□□ -2.91
HMGA1P17096 SNORD77.4-201ENST00000516158 81 ntBASIC-3.14□□□□□ -2.91
HMGA1P17096 FAS-AS1.1-201ENST00000615327 126 ntBASIC-3.14□□□□□ -2.91
HMGA1P17096 RNU6-874P-201ENST00000362390 105 ntBASIC-3.15□□□□□ -2.91
HMGA1P17096 RNU6-931P-201ENST00000363850 107 ntBASIC-3.15□□□□□ -2.91
HMGA1P17096 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.15□□□□□ -2.91
HMGA1P17096 AC073415.1-201ENST00000449240 153 ntBASIC-3.15□□□□□ -2.91
HMGA1P17096 RNU7-70P-201ENST00000516941 66 ntBASIC-3.15□□□□□ -2.91
HMGA1P17096 MIR548AE2-201ENST00000583456 67 ntBASIC-3.15□□□□□ -2.91
HMGA1P17096 Y_RNA.304-201ENST00000365011 112 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 Y_RNA.342-201ENST00000365352 113 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 Y_RNA.558-201ENST00000384685 113 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 RNU6-141P-201ENST00000410499 105 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 MIR3129-201ENST00000581095 76 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 DEFB117-201ENST00000602356 141 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 AC019193.3-201ENST00000609144 554 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 AP001506.1-201ENST00000615444 211 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 AP001362.1-201ENST00000625165 124 ntBASIC-3.16□□□□□ -2.92
HMGA1P17096 Y_RNA.105-201ENST00000363182 111 ntBASIC-3.17□□□□□ -2.92
HMGA1P17096 RNU6-647P-201ENST00000364243 107 ntBASIC-3.17□□□□□ -2.92
HMGA1P17096 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-3.17□□□□□ -2.92
HMGA1P17096 SNORA19.3-201ENST00000516165 130 ntBASIC-3.17□□□□□ -2.92
HMGA1P17096 AC097639.2-201ENST00000603159 172 ntBASIC-3.17□□□□□ -2.92
HMGA1P17096 AL021707.8-201ENST00000609428 183 ntBASIC-3.17□□□□□ -2.92
HMGA1P17096 RNU6-102P-201ENST00000384485 104 ntBASIC-3.18□□□□□ -2.92
HMGA1P17096 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.18□□□□□ -2.92
HMGA1P17096 RNU6-95P-201ENST00000384697 107 ntBASIC-3.18□□□□□ -2.92
HMGA1P17096 AC024067.1-201ENST00000426199 223 ntBASIC-3.18□□□□□ -2.92
HMGA1P17096 RNU6-766P-201ENST00000362478 107 ntBASIC-3.19□□□□□ -2.92
HMGA1P17096 Y_RNA.66-201ENST00000362862 102 ntBASIC-3.19□□□□□ -2.92
HMGA1P17096 RNU6-563P-201ENST00000364872 108 ntBASIC-3.19□□□□□ -2.92
HMGA1P17096 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.19□□□□□ -2.92
HMGA1P17096 RNU6-306P-201ENST00000384617 107 ntBASIC-3.19□□□□□ -2.92
HMGA1P17096 Y_RNA.721-201ENST00000517207 102 ntBASIC-3.19□□□□□ -2.92
HMGA1P17096 MIR3682-201ENST00000581338 84 ntBASIC-3.19□□□□□ -2.92
HMGA1P17096 MIR4424-201ENST00000585257 86 ntBASIC-3.19□□□□□ -2.92
HMGA1P17096 AC012531.4-201ENST00000616509 177 ntBASIC-3.19□□□□□ -2.92
HMGA1P17096 Y_RNA.82-201ENST00000363000 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.92-201ENST00000363043 102 ntBASIC-3.2□□□□□ -2.92
HMGA1P17096 Y_RNA.157-201ENST00000363638 102 ntBASIC-3.2□□□□□ -2.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms