Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RNU6-62P-201ENST00000516526 102 ntBASIC0.88□□□□□ -2.27
CDH1P12830 SNORD67.1-201ENST00000516618 108 ntBASIC0.88□□□□□ -2.27
CDH1P12830 RNU7-137P-201ENST00000516788 62 ntBASIC0.88□□□□□ -2.27
CDH1P12830 RNU7-6P-201ENST00000516845 62 ntBASIC0.88□□□□□ -2.27
CDH1P12830 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
CDH1P12830 AL589743.1-201ENST00000551932 2712 ntBASIC0.87□□□□□ -2.27
CDH1P12830 SNORD115-19-201ENST00000363098 82 ntBASIC0.87□□□□□ -2.27
CDH1P12830 SNORD115-18-201ENST00000363293 82 ntBASIC0.87□□□□□ -2.27
CDH1P12830 SNORD115-17-201ENST00000364612 82 ntBASIC0.87□□□□□ -2.27
CDH1P12830 Y_RNA.353-201ENST00000365440 108 ntBASIC0.87□□□□□ -2.27
CDH1P12830 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
CDH1P12830 MIR759-201ENST00000390224 91 ntBASIC0.87□□□□□ -2.27
CDH1P12830 UBL5P1-201ENST00000507979 193 ntBASIC0.87□□□□□ -2.27
CDH1P12830 SNORD33.1-201ENST00000516213 88 ntBASIC0.87□□□□□ -2.27
CDH1P12830 RNU6-479P-201ENST00000516348 105 ntBASIC0.87□□□□□ -2.27
CDH1P12830 MIR4676-201ENST00000583078 72 ntBASIC0.87□□□□□ -2.27
CDH1P12830 U6.95-201ENST00000636931 70 ntBASIC0.87□□□□□ -2.27
CDH1P12830 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CDH1P12830 MIR1-1-201ENST00000362147 71 ntBASIC0.86□□□□□ -2.27
CDH1P12830 MIR96-201ENST00000362288 78 ntBASIC0.86□□□□□ -2.27
CDH1P12830 RNU1-36P-201ENST00000365130 165 ntBASIC0.86□□□□□ -2.27
CDH1P12830 RNU6-616P-201ENST00000384353 107 ntBASIC0.86□□□□□ -2.27
CDH1P12830 SNORD77B-201ENST00000391112 67 ntBASIC0.86□□□□□ -2.27
CDH1P12830 AC067940.1-201ENST00000458411 300 ntBASIC0.86□□□□□ -2.27
CDH1P12830 U7.7-201ENST00000459276 60 ntBASIC0.86□□□□□ -2.27
CDH1P12830 RNU6-1110P-201ENST00000516462 101 ntBASIC0.86□□□□□ -2.27
CDH1P12830 FAM71BP1-201ENST00000604431 523 ntBASIC0.86□□□□□ -2.27
CDH1P12830 Y_RNA.773-201ENST00000607168 90 ntBASIC0.86□□□□□ -2.27
CDH1P12830 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.86□□□□□ -2.27
CDH1P12830 MIR6767-201ENST00000637302 66 ntBASIC0.86□□□□□ -2.27
CDH1P12830 Y_RNA.4-201ENST00000362333 112 ntBASIC0.85□□□□□ -2.27
CDH1P12830 SNORD114-10-201ENST00000363409 72 ntBASIC0.85□□□□□ -2.27
CDH1P12830 RNA5SP205-201ENST00000364653 136 ntBASIC0.85□□□□□ -2.27
CDH1P12830 MIR548D2-201ENST00000384955 97 ntBASIC0.85□□□□□ -2.27
CDH1P12830 MIR125B2-201ENST00000385128 89 ntBASIC0.85□□□□□ -2.27
CDH1P12830 MIR100-201ENST00000385259 80 ntBASIC0.85□□□□□ -2.27
CDH1P12830 SNORD89-201ENST00000390981 114 ntBASIC0.85□□□□□ -2.27
CDH1P12830 MIR1257-201ENST00000408490 117 ntBASIC0.85□□□□□ -2.27
CDH1P12830 SNORD93-201ENST00000408813 74 ntBASIC0.85□□□□□ -2.27
CDH1P12830 RNA5SP255-201ENST00000516370 107 ntBASIC0.85□□□□□ -2.27
CDH1P12830 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
CDH1P12830 MIR4804-201ENST00000581683 73 ntBASIC0.85□□□□□ -2.27
CDH1P12830 U2.22-201ENST00000636441 106 ntBASIC0.85□□□□□ -2.27
CDH1P12830 RNY4P6-201ENST00000363667 96 ntBASIC0.84□□□□□ -2.27
CDH1P12830 Y_RNA.164-201ENST00000363709 102 ntBASIC0.84□□□□□ -2.27
CDH1P12830 Y_RNA.344-201ENST00000365381 112 ntBASIC0.84□□□□□ -2.27
CDH1P12830 RNU6-1335P-201ENST00000365426 107 ntBASIC0.84□□□□□ -2.27
CDH1P12830 MIR206-201ENST00000384872 86 ntBASIC0.84□□□□□ -2.27
CDH1P12830 RNU6-1154P-201ENST00000391001 104 ntBASIC0.84□□□□□ -2.27
CDH1P12830 Y_RNA.588-201ENST00000391254 102 ntBASIC0.84□□□□□ -2.27
CDH1P12830 RPL39P25-201ENST00000449384 154 ntBASIC0.84□□□□□ -2.27
CDH1P12830 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.84□□□□□ -2.27
CDH1P12830 Y_RNA.649-201ENST00000459077 103 ntBASIC0.84□□□□□ -2.27
CDH1P12830 RNU6-313P-201ENST00000516317 112 ntBASIC0.84□□□□□ -2.27
CDH1P12830 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
CDH1P12830 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.84□□□□□ -2.27
CDH1P12830 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
CDH1P12830 RNU6-1307P-201ENST00000391012 103 ntBASIC0.83□□□□□ -2.28
CDH1P12830 RNU2-51P-201ENST00000410708 197 ntBASIC0.83□□□□□ -2.28
CDH1P12830 RNU7-56P-201ENST00000458744 62 ntBASIC0.83□□□□□ -2.28
CDH1P12830 PDCD5P2-201ENST00000507570 312 ntBASIC0.83□□□□□ -2.28
CDH1P12830 RNU6-977P-201ENST00000516411 103 ntBASIC0.83□□□□□ -2.28
CDH1P12830 MIR4491-201ENST00000581087 68 ntBASIC0.83□□□□□ -2.28
CDH1P12830 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
CDH1P12830 RMST_2.1-201ENST00000617263 136 ntBASIC0.83□□□□□ -2.28
CDH1P12830 AC105081.1-201ENST00000617727 106 ntBASIC0.83□□□□□ -2.28
CDH1P12830 MIR1255B1-201ENST00000636325 63 ntBASIC0.83□□□□□ -2.28
CDH1P12830 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
CDH1P12830 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CDH1P12830 MIR548A1-201ENST00000385041 97 ntBASIC0.82□□□□□ -2.28
CDH1P12830 MIR548A3-201ENST00000385297 97 ntBASIC0.82□□□□□ -2.28
CDH1P12830 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CDH1P12830 RNU6-1321P-201ENST00000390905 107 ntBASIC0.82□□□□□ -2.28
CDH1P12830 MIR938-201ENST00000401216 83 ntBASIC0.82□□□□□ -2.28
CDH1P12830 RNU4-83P-201ENST00000410863 133 ntBASIC0.82□□□□□ -2.28
CDH1P12830 RNU7-2P-201ENST00000516096 62 ntBASIC0.82□□□□□ -2.28
CDH1P12830 SNORD92-201ENST00000585078 85 ntBASIC0.82□□□□□ -2.28
CDH1P12830 AL670379.3-201ENST00000605040 251 ntBASIC0.82□□□□□ -2.28
CDH1P12830 MIR6857-201ENST00000613267 93 ntBASIC0.82□□□□□ -2.28
CDH1P12830 MIR8066-201ENST00000617280 78 ntBASIC0.82□□□□□ -2.28
CDH1P12830 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CDH1P12830 SNORD115-35-201ENST00000365122 82 ntBASIC0.81□□□□□ -2.28
CDH1P12830 Y_RNA.362-201ENST00000365518 110 ntBASIC0.81□□□□□ -2.28
CDH1P12830 MIR520F-201ENST00000384824 87 ntBASIC0.81□□□□□ -2.28
CDH1P12830 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.81□□□□□ -2.28
CDH1P12830 RNU7-156P-201ENST00000517214 74 ntBASIC0.81□□□□□ -2.28
CDH1P12830 AC138749.4-201ENST00000563970 127 ntBASIC0.81□□□□□ -2.28
CDH1P12830 AC007012.1-201ENST00000567192 175 ntBASIC0.81□□□□□ -2.28
CDH1P12830 MIR4679-2-201ENST00000578358 77 ntBASIC0.81□□□□□ -2.28
CDH1P12830 AL136317.1-201ENST00000612653 226 ntBASIC0.81□□□□□ -2.28
CDH1P12830 MIR8070-201ENST00000616510 88 ntBASIC0.81□□□□□ -2.28
CDH1P12830 AL035470.1-201ENST00000622571 220 ntBASIC0.81□□□□□ -2.28
CDH1P12830 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
CDH1P12830 Y_RNA.42-201ENST00000362660 108 ntBASIC0.8□□□□□ -2.28
CDH1P12830 RNU1-93P-201ENST00000364704 169 ntBASIC0.8□□□□□ -2.28
CDH1P12830 Y_RNA.549-201ENST00000384657 102 ntBASIC0.8□□□□□ -2.28
CDH1P12830 SNORD105-201ENST00000386910 85 ntBASIC0.8□□□□□ -2.28
CDH1P12830 MIR1276-201ENST00000408707 83 ntBASIC0.8□□□□□ -2.28
CDH1P12830 RNU6-447P-201ENST00000410293 104 ntBASIC0.8□□□□□ -2.28
CDH1P12830 RNU6-1118P-201ENST00000410382 104 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 301 ms