Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MIR3941-201ENST00000582572 103 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 PISRT1.1-201ENST00000616930 107 ntBASIC-4.51□□□□□ -3.13
TOP2AP11388 SNORD36A-201ENST00000362874 73 ntBASIC-4.52□□□□□ -3.13
TOP2AP11388 Y_RNA.79-201ENST00000362992 113 ntBASIC-4.52□□□□□ -3.13
TOP2AP11388 RNU6-957P-201ENST00000363652 99 ntBASIC-4.52□□□□□ -3.13
TOP2AP11388 RNU6-769P-201ENST00000384407 104 ntBASIC-4.52□□□□□ -3.13
TOP2AP11388 RNU6-935P-201ENST00000410371 100 ntBASIC-4.52□□□□□ -3.13
TOP2AP11388 AP001362.1-201ENST00000625165 124 ntBASIC-4.52□□□□□ -3.13
TOP2AP11388 SNORD27-201ENST00000363981 72 ntBASIC-4.53□□□□□ -3.13
TOP2AP11388 Y_RNA.266-201ENST00000364678 96 ntBASIC-4.53□□□□□ -3.13
TOP2AP11388 RNU6-214P-201ENST00000384130 107 ntBASIC-4.53□□□□□ -3.13
TOP2AP11388 MTND3P21-201ENST00000433774 331 ntBASIC-4.53□□□□□ -3.13
TOP2AP11388 RBMX2P4-201ENST00000441256 376 ntBASIC-4.53□□□□□ -3.13
TOP2AP11388 RNU6-760P-201ENST00000516078 97 ntBASIC-4.53□□□□□ -3.13
TOP2AP11388 RNU7-70P-201ENST00000516941 66 ntBASIC-4.53□□□□□ -3.13
TOP2AP11388 AL158211.2-201ENST00000607282 395 ntBASIC-4.53□□□□□ -3.13
TOP2AP11388 RNU6-1145P-201ENST00000384246 107 ntBASIC-4.54□□□□□ -3.14
TOP2AP11388 MIR521-1-201ENST00000384902 87 ntBASIC-4.54□□□□□ -3.14
TOP2AP11388 MIR451A-201ENST00000385059 72 ntBASIC-4.54□□□□□ -3.14
TOP2AP11388 Y_RNA.127-201ENST00000363386 109 ntBASIC-4.55□□□□□ -3.14
TOP2AP11388 Y_RNA.465-201ENST00000384293 102 ntBASIC-4.55□□□□□ -3.14
TOP2AP11388 MTCYBP36-201ENST00000404146 440 ntBASIC-4.55□□□□□ -3.14
TOP2AP11388 SNORA36B-201ENST00000410438 131 ntBASIC-4.55□□□□□ -3.14
TOP2AP11388 RNU6-625P-201ENST00000459412 107 ntBASIC-4.55□□□□□ -3.14
TOP2AP11388 RNU6-1170P-201ENST00000515974 106 ntBASIC-4.55□□□□□ -3.14
TOP2AP11388 Y_RNA.394-201ENST00000383942 103 ntBASIC-4.56□□□□□ -3.14
TOP2AP11388 Y_RNA.486-201ENST00000384398 107 ntBASIC-4.56□□□□□ -3.14
TOP2AP11388 MTND4P24-201ENST00000424002 397 ntBASIC-4.56□□□□□ -3.14
TOP2AP11388 RNU6-1270P-201ENST00000517128 108 ntBASIC-4.56□□□□□ -3.14
TOP2AP11388 AC007494.3-201ENST00000624660 743 ntBASIC-4.56□□□□□ -3.14
TOP2AP11388 RNU6-682P-201ENST00000363843 106 ntBASIC-4.56□□□□□ -3.14
TOP2AP11388 RNU6-478P-201ENST00000363904 110 ntBASIC-4.56□□□□□ -3.14
TOP2AP11388 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-4.56□□□□□ -3.14
TOP2AP11388 AC064836.2-201ENST00000609491 462 ntBASIC-4.56□□□□□ -3.14
TOP2AP11388 SNORD50.1-201ENST00000362987 71 ntBASIC-4.57□□□□□ -3.14
TOP2AP11388 U6.112-201ENST00000384129 70 ntBASIC-4.57□□□□□ -3.14
TOP2AP11388 Y_RNA.631-201ENST00000459607 101 ntBASIC-4.57□□□□□ -3.14
TOP2AP11388 RNU6-201P-201ENST00000517100 61 ntBASIC-4.57□□□□□ -3.14
TOP2AP11388 AC087741.2-201ENST00000619415 172 ntBASIC-4.57□□□□□ -3.14
TOP2AP11388 RNU6-235P-201ENST00000362644 107 ntBASIC-4.58□□□□□ -3.14
TOP2AP11388 Y_RNA.349-201ENST00000365406 102 ntBASIC-4.58□□□□□ -3.14
TOP2AP11388 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.58□□□□□ -3.14
TOP2AP11388 AC073415.1-201ENST00000449240 153 ntBASIC-4.58□□□□□ -3.14
TOP2AP11388 RNU6-888P-201ENST00000363010 101 ntBASIC-4.59□□□□□ -3.14
TOP2AP11388 RNU6-596P-201ENST00000365395 98 ntBASIC-4.59□□□□□ -3.14
TOP2AP11388 Y_RNA.441-201ENST00000384123 112 ntBASIC-4.59□□□□□ -3.14
TOP2AP11388 RNU6-318P-201ENST00000384283 103 ntBASIC-4.59□□□□□ -3.14
TOP2AP11388 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-4.59□□□□□ -3.14
TOP2AP11388 RNU7-113P-201ENST00000459273 62 ntBASIC-4.59□□□□□ -3.14
TOP2AP11388 Y_RNA.690-201ENST00000516603 95 ntBASIC-4.59□□□□□ -3.14
TOP2AP11388 MIR4789-201ENST00000577469 82 ntBASIC-4.59□□□□□ -3.14
TOP2AP11388 Y_RNA.448-201ENST00000384185 108 ntBASIC-4.6□□□□□ -3.15
TOP2AP11388 Y_RNA.793-201ENST00000411222 111 ntBASIC-4.6□□□□□ -3.15
TOP2AP11388 RNU6-1129P-201ENST00000515964 104 ntBASIC-4.6□□□□□ -3.15
TOP2AP11388 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-4.6□□□□□ -3.15
TOP2AP11388 MTND4LP25-201ENST00000570218 163 ntBASIC-4.6□□□□□ -3.15
TOP2AP11388 MIR4724-201ENST00000579485 89 ntBASIC-4.6□□□□□ -3.15
TOP2AP11388 AC097639.2-201ENST00000603159 172 ntBASIC-4.6□□□□□ -3.15
TOP2AP11388 RNU6-462P-201ENST00000362659 105 ntBASIC-4.61□□□□□ -3.15
TOP2AP11388 RNU6-519P-201ENST00000410590 108 ntBASIC-4.61□□□□□ -3.15
TOP2AP11388 RNU6-518P-201ENST00000516056 96 ntBASIC-4.61□□□□□ -3.15
TOP2AP11388 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-4.61□□□□□ -3.15
TOP2AP11388 MTCO3P23-201ENST00000561363 289 ntBASIC-4.61□□□□□ -3.15
TOP2AP11388 AL080274.1-201ENST00000605565 220 ntBASIC-4.61□□□□□ -3.15
TOP2AP11388 AC069545.1-201ENST00000605671 358 ntBASIC-4.61□□□□□ -3.15
TOP2AP11388 MIRLET7A3-201ENST00000362116 74 ntBASIC-4.62□□□□□ -3.15
TOP2AP11388 RNY1P16-201ENST00000363063 111 ntBASIC-4.62□□□□□ -3.15
TOP2AP11388 RNU6-1214P-201ENST00000363650 109 ntBASIC-4.62□□□□□ -3.15
TOP2AP11388 Y_RNA.515-201ENST00000384535 112 ntBASIC-4.62□□□□□ -3.15
TOP2AP11388 RNU7-138P-201ENST00000459479 64 ntBASIC-4.62□□□□□ -3.15
TOP2AP11388 AC104010.1-201ENST00000616889 150 ntBASIC-4.62□□□□□ -3.15
TOP2AP11388 Y_RNA.341-201ENST00000365341 102 ntBASIC-4.62□□□□□ -3.15
TOP2AP11388 MIR1284-201ENST00000408337 120 ntBASIC-4.62□□□□□ -3.15
TOP2AP11388 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-4.62□□□□□ -3.15
TOP2AP11388 MIR548AG1-201ENST00000579932 66 ntBASIC-4.62□□□□□ -3.15
TOP2AP11388 RNU6-1277P-201ENST00000364561 107 ntBASIC-4.63□□□□□ -3.15
TOP2AP11388 Y_RNA.310-201ENST00000365063 113 ntBASIC-4.63□□□□□ -3.15
TOP2AP11388 PCMTD1P1-201ENST00000455560 355 ntBASIC-4.63□□□□□ -3.15
TOP2AP11388 SNORD18C-201ENST00000362704 69 ntBASIC-4.64□□□□□ -3.15
TOP2AP11388 RNU6-260P-201ENST00000384092 107 ntBASIC-4.64□□□□□ -3.15
TOP2AP11388 RNU6-696P-201ENST00000390834 107 ntBASIC-4.64□□□□□ -3.15
TOP2AP11388 AL590004.1-201ENST00000405321 300 ntBASIC-4.64□□□□□ -3.15
TOP2AP11388 MIR3912-201ENST00000577566 105 ntBASIC-4.64□□□□□ -3.15
TOP2AP11388 MIR548A1-201ENST00000385041 97 ntBASIC-4.65□□□□□ -3.15
TOP2AP11388 RNU2-38P-201ENST00000410856 79 ntBASIC-4.65□□□□□ -3.15
TOP2AP11388 AP002392.1-201ENST00000537692 208 ntBASIC-4.65□□□□□ -3.15
TOP2AP11388 AL118558.2-201ENST00000556294 238 ntBASIC-4.65□□□□□ -3.15
TOP2AP11388 MIR5708-201ENST00000579723 85 ntBASIC-4.65□□□□□ -3.15
TOP2AP11388 AL512427.1-201ENST00000618593 349 ntBASIC-4.65□□□□□ -3.15
TOP2AP11388 RNU6-224P-201ENST00000384055 107 ntBASIC-4.66□□□□□ -3.15
TOP2AP11388 RNU6-1114P-201ENST00000516022 107 ntBASIC-4.66□□□□□ -3.15
TOP2AP11388 RNU6-436P-201ENST00000516171 114 ntBASIC-4.66□□□□□ -3.15
TOP2AP11388 MIR206-201ENST00000384872 86 ntBASIC-4.67□□□□□ -3.16
TOP2AP11388 RNU6-1262P-201ENST00000516217 96 ntBASIC-4.67□□□□□ -3.16
TOP2AP11388 RNA5SP147-201ENST00000516493 109 ntBASIC-4.67□□□□□ -3.16
TOP2AP11388 Y_RNA.704-201ENST00000516851 102 ntBASIC-4.67□□□□□ -3.16
TOP2AP11388 AC245297.2-201ENST00000610119 565 ntBASIC-4.67□□□□□ -3.16
TOP2AP11388 RNU6-481P-201ENST00000384194 107 ntBASIC-4.67□□□□□ -3.16
TOP2AP11388 RNU6-365P-201ENST00000517113 106 ntBASIC-4.67□□□□□ -3.16
TOP2AP11388 Y_RNA.159-201ENST00000363674 87 ntBASIC-4.68□□□□□ -3.16
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms