Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC011603.4-201ENST00000611325 277 ntBASIC0.44□□□□□ -2.34
TOP1P11387 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.43□□□□□ -2.34
TOP1P11387 MIR18A-201ENST00000362310 71 ntBASIC0.43□□□□□ -2.34
TOP1P11387 Y_RNA.42-201ENST00000362660 108 ntBASIC0.43□□□□□ -2.34
TOP1P11387 SNORD114-23-201ENST00000363536 72 ntBASIC0.43□□□□□ -2.34
TOP1P11387 RNU4-11P-201ENST00000365287 132 ntBASIC0.43□□□□□ -2.34
TOP1P11387 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
TOP1P11387 Y_RNA.531-201ENST00000384589 121 ntBASIC0.43□□□□□ -2.34
TOP1P11387 SNORD37.2-201ENST00000391075 66 ntBASIC0.43□□□□□ -2.34
TOP1P11387 MIR1257-201ENST00000408490 117 ntBASIC0.43□□□□□ -2.34
TOP1P11387 SNORD100-201ENST00000408573 76 ntBASIC0.43□□□□□ -2.34
TOP1P11387 SNORD93-201ENST00000408813 74 ntBASIC0.43□□□□□ -2.34
TOP1P11387 RNA5SP237-201ENST00000410414 113 ntBASIC0.43□□□□□ -2.34
TOP1P11387 RNU6-1086P-201ENST00000410930 100 ntBASIC0.43□□□□□ -2.34
TOP1P11387 RNU6-893P-201ENST00000458841 100 ntBASIC0.43□□□□□ -2.34
TOP1P11387 AC002350.1-201ENST00000490759 375 ntBASIC0.43□□□□□ -2.34
TOP1P11387 RNU7-79P-201ENST00000516082 62 ntBASIC0.43□□□□□ -2.34
TOP1P11387 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
TOP1P11387 MIR3144-201ENST00000579460 79 ntBASIC0.43□□□□□ -2.34
TOP1P11387 MIR4491-201ENST00000581087 68 ntBASIC0.43□□□□□ -2.34
TOP1P11387 MIR4305-201ENST00000583252 102 ntBASIC0.43□□□□□ -2.34
TOP1P11387 AC108081.1-201ENST00000604358 221 ntBASIC0.43□□□□□ -2.34
TOP1P11387 Y_RNA.778-201ENST00000620203 90 ntBASIC0.43□□□□□ -2.34
TOP1P11387 RNU6-151P-201ENST00000364158 107 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-690P-201ENST00000365242 106 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNY1P4-201ENST00000384595 115 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-447P-201ENST00000410293 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-1118P-201ENST00000410382 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-1076P-201ENST00000410397 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-355P-201ENST00000410427 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-791P-201ENST00000410467 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-705P-201ENST00000410601 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-1100P-201ENST00000410691 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-860P-201ENST00000410860 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNA5SP222-201ENST00000411039 105 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-1217P-201ENST00000411276 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 RNU6-785P-201ENST00000411324 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 U6.90-201ENST00000614007 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 U6.70-201ENST00000620287 104 ntBASIC0.42□□□□□ -2.34
TOP1P11387 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.41□□□□□ -2.34
TOP1P11387 Y_RNA.398-201ENST00000383952 99 ntBASIC0.41□□□□□ -2.34
TOP1P11387 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
TOP1P11387 RNU6-364P-201ENST00000384387 107 ntBASIC0.41□□□□□ -2.34
TOP1P11387 RNU6-460P-201ENST00000391158 108 ntBASIC0.41□□□□□ -2.34
TOP1P11387 Y_RNA.617-201ENST00000410920 90 ntBASIC0.41□□□□□ -2.34
TOP1P11387 AL022718.1-201ENST00000412004 84 ntBASIC0.41□□□□□ -2.34
TOP1P11387 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.41□□□□□ -2.34
TOP1P11387 AC108059.2-201ENST00000434626 151 ntBASIC0.41□□□□□ -2.34
TOP1P11387 MTATP6P21-201ENST00000440681 189 ntBASIC0.41□□□□□ -2.34
TOP1P11387 RNU7-113P-201ENST00000459273 62 ntBASIC0.41□□□□□ -2.34
TOP1P11387 Y_RNA.690-201ENST00000516603 95 ntBASIC0.41□□□□□ -2.34
TOP1P11387 RNA5SP33-201ENST00000516687 98 ntBASIC0.41□□□□□ -2.34
TOP1P11387 RNA5SP480-201ENST00000516840 109 ntBASIC0.41□□□□□ -2.34
TOP1P11387 MTND5P41-201ENST00000517498 206 ntBASIC0.41□□□□□ -2.34
TOP1P11387 MIR3121-201ENST00000579680 77 ntBASIC0.41□□□□□ -2.34
TOP1P11387 MIR3671-201ENST00000580455 88 ntBASIC0.41□□□□□ -2.34
TOP1P11387 MIR548AE2-201ENST00000583456 67 ntBASIC0.41□□□□□ -2.34
TOP1P11387 AL359881.1-201ENST00000602916 267 ntBASIC0.41□□□□□ -2.34
TOP1P11387 Y_RNA.13-201ENST00000362403 112 ntBASIC0.4□□□□□ -2.35
TOP1P11387 Y_RNA.366-201ENST00000365540 102 ntBASIC0.4□□□□□ -2.35
TOP1P11387 RNU6-449P-201ENST00000383914 107 ntBASIC0.4□□□□□ -2.35
TOP1P11387 SNORD116-18-201ENST00000383961 92 ntBASIC0.4□□□□□ -2.35
TOP1P11387 RNU6-1104P-201ENST00000384723 104 ntBASIC0.4□□□□□ -2.35
TOP1P11387 RNU4-83P-201ENST00000410863 133 ntBASIC0.4□□□□□ -2.35
TOP1P11387 RNU7-123P-201ENST00000515911 60 ntBASIC0.4□□□□□ -2.35
TOP1P11387 RNU6-448P-201ENST00000517052 107 ntBASIC0.4□□□□□ -2.35
TOP1P11387 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.4□□□□□ -2.35
TOP1P11387 IGKV1-22-201ENST00000524313 326 ntBASIC0.4□□□□□ -2.35
TOP1P11387 AC133485.4-201ENST00000561835 220 ntBASIC0.4□□□□□ -2.35
TOP1P11387 AC138907.4-201ENST00000570107 226 ntBASIC0.4□□□□□ -2.35
TOP1P11387 AC021443.1-201ENST00000604478 211 ntBASIC0.4□□□□□ -2.35
TOP1P11387 MIR6082-201ENST00000613604 109 ntBASIC0.4□□□□□ -2.35
TOP1P11387 Y_RNA.8-201ENST00000362353 102 ntBASIC0.39□□□□□ -2.35
TOP1P11387 SNORD114-26-201ENST00000363543 72 ntBASIC0.39□□□□□ -2.35
TOP1P11387 Y_RNA.298-201ENST00000364960 107 ntBASIC0.39□□□□□ -2.35
TOP1P11387 Y_RNA.466-201ENST00000384294 113 ntBASIC0.39□□□□□ -2.35
TOP1P11387 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
TOP1P11387 RNU7-164P-201ENST00000459221 62 ntBASIC0.39□□□□□ -2.35
TOP1P11387 AC021753.1-201ENST00000635724 168 ntBASIC0.39□□□□□ -2.35
TOP1P11387 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TOP1P11387 SNORD18B-201ENST00000365659 72 ntBASIC0.38□□□□□ -2.35
TOP1P11387 SNORA36.2-201ENST00000384004 127 ntBASIC0.38□□□□□ -2.35
TOP1P11387 SNORA32-201ENST00000384072 121 ntBASIC0.38□□□□□ -2.35
TOP1P11387 SNORA25.16-201ENST00000516741 121 ntBASIC0.38□□□□□ -2.35
TOP1P11387 AC022523.2-201ENST00000561045 150 ntBASIC0.38□□□□□ -2.35
TOP1P11387 AC098479.1-201ENST00000609225 154 ntBASIC0.38□□□□□ -2.35
TOP1P11387 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.38□□□□□ -2.35
TOP1P11387 AC010487.4-201ENST00000637027 61 ntBASIC0.38□□□□□ -2.35
TOP1P11387 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.37□□□□□ -2.35
TOP1P11387 RNU6-403P-201ENST00000363163 104 ntBASIC0.37□□□□□ -2.35
TOP1P11387 Y_RNA.180-201ENST00000363867 113 ntBASIC0.37□□□□□ -2.35
TOP1P11387 Y_RNA.270-201ENST00000364693 104 ntBASIC0.37□□□□□ -2.35
TOP1P11387 Y_RNA.400-201ENST00000383963 111 ntBASIC0.37□□□□□ -2.35
TOP1P11387 Y_RNA.555-201ENST00000384673 110 ntBASIC0.37□□□□□ -2.35
TOP1P11387 MIR569-201ENST00000385228 96 ntBASIC0.37□□□□□ -2.35
TOP1P11387 MIR140-201ENST00000385282 100 ntBASIC0.37□□□□□ -2.35
TOP1P11387 MT-TI-201ENST00000387365 69 ntBASIC0.37□□□□□ -2.35
TOP1P11387 SNORD67.1-201ENST00000516618 108 ntBASIC0.37□□□□□ -2.35
TOP1P11387 RNU7-137P-201ENST00000516788 62 ntBASIC0.37□□□□□ -2.35
TOP1P11387 RNU6-765P-201ENST00000516916 99 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 421 ms