Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.21□□□□□ -2.44
CD28P10747 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.21□□□□□ -2.44
CD28P10747 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.21□□□□□ -2.44
CD28P10747 RNU7-165P-201ENST00000458864 60 ntBASIC-0.21□□□□□ -2.44
CD28P10747 AC138749.4-201ENST00000563970 127 ntBASIC-0.21□□□□□ -2.44
CD28P10747 AC138869.1-201ENST00000568623 124 ntBASIC-0.21□□□□□ -2.44
CD28P10747 AC098479.1-201ENST00000609225 154 ntBASIC-0.21□□□□□ -2.44
CD28P10747 SNORD114-31-201ENST00000363219 75 ntBASIC-0.22□□□□□ -2.44
CD28P10747 SNORD115-24-201ENST00000363528 82 ntBASIC-0.22□□□□□ -2.44
CD28P10747 RNA5SP403-201ENST00000363598 108 ntBASIC-0.22□□□□□ -2.44
CD28P10747 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.22□□□□□ -2.44
CD28P10747 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.22□□□□□ -2.44
CD28P10747 RNU4-16P-201ENST00000364737 141 ntBASIC-0.22□□□□□ -2.44
CD28P10747 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.22□□□□□ -2.44
CD28P10747 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.22□□□□□ -2.44
CD28P10747 SNORD41.1-201ENST00000391000 69 ntBASIC-0.22□□□□□ -2.44
CD28P10747 AC108059.2-201ENST00000434626 151 ntBASIC-0.22□□□□□ -2.44
CD28P10747 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.22□□□□□ -2.44
CD28P10747 MIR4744-201ENST00000581563 82 ntBASIC-0.22□□□□□ -2.44
CD28P10747 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.22□□□□□ -2.44
CD28P10747 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.22□□□□□ -2.44
CD28P10747 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.23□□□□□ -2.45
CD28P10747 RNU6-652P-201ENST00000365488 107 ntBASIC-0.23□□□□□ -2.45
CD28P10747 RNU6-929P-201ENST00000384429 107 ntBASIC-0.23□□□□□ -2.45
CD28P10747 RNU7-159P-201ENST00000459284 62 ntBASIC-0.23□□□□□ -2.45
CD28P10747 RNU7-137P-201ENST00000516788 62 ntBASIC-0.23□□□□□ -2.45
CD28P10747 RNU7-161P-201ENST00000517289 62 ntBASIC-0.23□□□□□ -2.45
CD28P10747 IGLVI-20-201ENST00000519296 130 ntBASIC-0.23□□□□□ -2.45
CD28P10747 uc_338.28-201ENST00000612082 187 ntBASIC-0.23□□□□□ -2.45
CD28P10747 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.24□□□□□ -2.45
CD28P10747 RNU6-923P-201ENST00000364753 107 ntBASIC-0.24□□□□□ -2.45
CD28P10747 RNU6-578P-201ENST00000390980 103 ntBASIC-0.24□□□□□ -2.45
CD28P10747 MTCYBP6-201ENST00000441810 138 ntBASIC-0.24□□□□□ -2.45
CD28P10747 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.24□□□□□ -2.45
CD28P10747 RNA5SP476-201ENST00000516613 103 ntBASIC-0.24□□□□□ -2.45
CD28P10747 RNU6-180P-201ENST00000516697 61 ntBASIC-0.24□□□□□ -2.45
CD28P10747 DEFB131E-201ENST00000532329 154 ntBASIC-0.24□□□□□ -2.45
CD28P10747 U7.6-201ENST00000610841 64 ntBASIC-0.24□□□□□ -2.45
CD28P10747 U6.109-201ENST00000636749 87 ntBASIC-0.24□□□□□ -2.45
CD28P10747 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.25□□□□□ -2.45
CD28P10747 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.25□□□□□ -2.45
CD28P10747 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.25□□□□□ -2.45
CD28P10747 SNORA33.2-201ENST00000365413 134 ntBASIC-0.25□□□□□ -2.45
CD28P10747 AL121914.1-201ENST00000450188 156 ntBASIC-0.25□□□□□ -2.45
CD28P10747 SNORA70.25-201ENST00000612741 95 ntBASIC-0.25□□□□□ -2.45
CD28P10747 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.25□□□□□ -2.45
CD28P10747 AC073869.9-201ENST00000641610 120 ntBASIC-0.25□□□□□ -2.45
CD28P10747 MIR101-2-201ENST00000362195 79 ntBASIC-0.26□□□□□ -2.45
CD28P10747 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.26□□□□□ -2.45
CD28P10747 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.26□□□□□ -2.45
CD28P10747 SNORD114-10-201ENST00000363409 72 ntBASIC-0.26□□□□□ -2.45
CD28P10747 RNY1P2-201ENST00000364820 117 ntBASIC-0.26□□□□□ -2.45
CD28P10747 RNU7-113P-201ENST00000459273 62 ntBASIC-0.26□□□□□ -2.45
CD28P10747 RNA5SP236-201ENST00000516169 116 ntBASIC-0.26□□□□□ -2.45
CD28P10747 MIR4643-201ENST00000577473 78 ntBASIC-0.26□□□□□ -2.45
CD28P10747 MIR548H5-201ENST00000580314 60 ntBASIC-0.26□□□□□ -2.45
CD28P10747 MIR4677-201ENST00000584153 80 ntBASIC-0.26□□□□□ -2.45
CD28P10747 AL359881.1-201ENST00000602916 267 ntBASIC-0.26□□□□□ -2.45
CD28P10747 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.27□□□□□ -2.45
CD28P10747 RNU6-643P-201ENST00000384018 107 ntBASIC-0.27□□□□□ -2.45
CD28P10747 RNU4-70P-201ENST00000384579 139 ntBASIC-0.27□□□□□ -2.45
CD28P10747 RNU6-429P-201ENST00000384582 108 ntBASIC-0.27□□□□□ -2.45
CD28P10747 MT-TW-201ENST00000387382 68 ntBASIC-0.27□□□□□ -2.45
CD28P10747 AL022718.1-201ENST00000412004 84 ntBASIC-0.27□□□□□ -2.45
CD28P10747 SNORD67.1-201ENST00000516618 108 ntBASIC-0.27□□□□□ -2.45
CD28P10747 RNA5SP33-201ENST00000516687 98 ntBASIC-0.27□□□□□ -2.45
CD28P10747 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.27□□□□□ -2.45
CD28P10747 MIR3925-201ENST00000584674 77 ntBASIC-0.27□□□□□ -2.45
CD28P10747 MIR8062-201ENST00000621515 85 ntBASIC-0.27□□□□□ -2.45
CD28P10747 MIR6086-201ENST00000638065 55 ntBASIC-0.27□□□□□ -2.45
CD28P10747 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.28□□□□□ -2.45
CD28P10747 SNORA18.1-201ENST00000363418 128 ntBASIC-0.28□□□□□ -2.45
CD28P10747 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.28□□□□□ -2.45
CD28P10747 RNU6-449P-201ENST00000383914 107 ntBASIC-0.28□□□□□ -2.45
CD28P10747 RNU6-713P-201ENST00000384761 107 ntBASIC-0.28□□□□□ -2.45
CD28P10747 MIR1265-201ENST00000408444 86 ntBASIC-0.28□□□□□ -2.45
CD28P10747 AP001180.6-201ENST00000584918 159 ntBASIC-0.28□□□□□ -2.45
CD28P10747 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.28□□□□□ -2.45
CD28P10747 RNU7-10P-201ENST00000607194 63 ntBASIC-0.28□□□□□ -2.45
CD28P10747 SNORA25.7-201ENST00000364375 127 ntBASIC-0.29□□□□□ -2.46
CD28P10747 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.29□□□□□ -2.46
CD28P10747 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.29□□□□□ -2.46
CD28P10747 RNU6-46P-201ENST00000383860 107 ntBASIC-0.29□□□□□ -2.46
CD28P10747 RNU6-639P-201ENST00000384074 107 ntBASIC-0.29□□□□□ -2.46
CD28P10747 RNU6-472P-201ENST00000384299 107 ntBASIC-0.29□□□□□ -2.46
CD28P10747 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.29□□□□□ -2.46
CD28P10747 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.29□□□□□ -2.46
CD28P10747 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.29□□□□□ -2.46
CD28P10747 MIR548AE2-201ENST00000583456 67 ntBASIC-0.29□□□□□ -2.46
CD28P10747 U6.104-201ENST00000637979 90 ntBASIC-0.29□□□□□ -2.46
CD28P10747 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.3□□□□□ -2.46
CD28P10747 MIR876-201ENST00000401147 81 ntBASIC-0.3□□□□□ -2.46
CD28P10747 MIR548L-201ENST00000408303 86 ntBASIC-0.3□□□□□ -2.46
CD28P10747 RNA5SP163-201ENST00000410304 99 ntBASIC-0.3□□□□□ -2.46
CD28P10747 SNORD4A-201ENST00000459174 72 ntBASIC-0.3□□□□□ -2.46
CD28P10747 MIR1270-201ENST00000459320 83 ntBASIC-0.3□□□□□ -2.46
CD28P10747 RNU7-104P-201ENST00000459398 79 ntBASIC-0.3□□□□□ -2.46
CD28P10747 MIR4493-201ENST00000584016 73 ntBASIC-0.3□□□□□ -2.46
CD28P10747 AC011603.4-201ENST00000611325 277 ntBASIC-0.3□□□□□ -2.46
CD28P10747 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms