Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1□□□□□ -2.25
MMP3P08254 RNU6-1086P-201ENST00000410930 100 ntBASIC1□□□□□ -2.25
MMP3P08254 MIR3910-1-201ENST00000580936 111 ntBASIC1□□□□□ -2.25
MMP3P08254 AL391516.1-201ENST00000554380 2449 ntBASIC1□□□□□ -2.25
MMP3P08254 AC023934.1-201ENST00000574529 2389 ntBASIC1□□□□□ -2.25
MMP3P08254 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
MMP3P08254 RNU6-1335P-201ENST00000365426 107 ntBASIC0.99□□□□□ -2.25
MMP3P08254 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
MMP3P08254 RNY1P4-201ENST00000384595 115 ntBASIC0.99□□□□□ -2.25
MMP3P08254 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
MMP3P08254 MIR216A-201ENST00000385063 110 ntBASIC0.99□□□□□ -2.25
MMP3P08254 RNU6-735P-201ENST00000410612 107 ntBASIC0.99□□□□□ -2.25
MMP3P08254 AC020891.4-201ENST00000605745 93 ntBASIC0.99□□□□□ -2.25
MMP3P08254 RNU6-369P-201ENST00000362515 102 ntBASIC0.98□□□□□ -2.25
MMP3P08254 SNORD115-2-201ENST00000362842 82 ntBASIC0.98□□□□□ -2.25
MMP3P08254 SNORD115-20-201ENST00000365099 82 ntBASIC0.98□□□□□ -2.25
MMP3P08254 Y_RNA.528-201ENST00000384575 108 ntBASIC0.98□□□□□ -2.25
MMP3P08254 MIR100-201ENST00000385259 80 ntBASIC0.98□□□□□ -2.25
MMP3P08254 RNU4-61P-201ENST00000411243 107 ntBASIC0.98□□□□□ -2.25
MMP3P08254 RPL39P25-201ENST00000449384 154 ntBASIC0.98□□□□□ -2.25
MMP3P08254 AC025166.1-201ENST00000612411 163 ntBASIC0.98□□□□□ -2.25
MMP3P08254 RNY1P13-201ENST00000365030 105 ntBASIC0.97□□□□□ -2.25
MMP3P08254 RNU6-80P-201ENST00000384195 107 ntBASIC0.97□□□□□ -2.25
MMP3P08254 RPS26P5-201ENST00000418544 335 ntBASIC0.97□□□□□ -2.25
MMP3P08254 AC067940.1-201ENST00000458411 300 ntBASIC0.97□□□□□ -2.25
MMP3P08254 RNU7-79P-201ENST00000516082 62 ntBASIC0.97□□□□□ -2.25
MMP3P08254 FAM71BP1-201ENST00000604431 523 ntBASIC0.97□□□□□ -2.25
MMP3P08254 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.97□□□□□ -2.25
MMP3P08254 AL157777.2-201ENST00000258070 137 ntBASIC0.96□□□□□ -2.26
MMP3P08254 Y_RNA.261-201ENST00000364631 102 ntBASIC0.96□□□□□ -2.26
MMP3P08254 RNU6-959P-201ENST00000384671 107 ntBASIC0.96□□□□□ -2.26
MMP3P08254 U8.15-201ENST00000390947 134 ntBASIC0.96□□□□□ -2.26
MMP3P08254 RNU4-69P-201ENST00000410677 143 ntBASIC0.96□□□□□ -2.26
MMP3P08254 RNU7-185P-201ENST00000459215 60 ntBASIC0.96□□□□□ -2.26
MMP3P08254 RNU6-1333P-201ENST00000516162 93 ntBASIC0.96□□□□□ -2.26
MMP3P08254 SNORD67.1-201ENST00000516618 108 ntBASIC0.96□□□□□ -2.26
MMP3P08254 RNU7-6P-201ENST00000516845 62 ntBASIC0.96□□□□□ -2.26
MMP3P08254 RNU7-35P-201ENST00000517174 62 ntBASIC0.96□□□□□ -2.26
MMP3P08254 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.96□□□□□ -2.26
MMP3P08254 AL359881.1-201ENST00000602916 267 ntBASIC0.96□□□□□ -2.26
MMP3P08254 AC105081.1-201ENST00000617727 106 ntBASIC0.96□□□□□ -2.26
MMP3P08254 MTND5P18-201ENST00000445624 1801 ntBASIC0.96□□□□□ -2.26
MMP3P08254 MIRLET7F2-201ENST00000385277 83 ntBASIC0.95□□□□□ -2.26
MMP3P08254 MT-TF-201ENST00000387314 71 ntBASIC0.95□□□□□ -2.26
MMP3P08254 MIR1257-201ENST00000408490 117 ntBASIC0.95□□□□□ -2.26
MMP3P08254 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.95□□□□□ -2.26
MMP3P08254 MIR4676-201ENST00000583078 72 ntBASIC0.95□□□□□ -2.26
MMP3P08254 AL365222.1-201ENST00000614661 98 ntBASIC0.95□□□□□ -2.26
MMP3P08254 AC132825.6-201ENST00000638861 357 ntBASIC0.95□□□□□ -2.26
MMP3P08254 MIR1-1-201ENST00000362147 71 ntBASIC0.94□□□□□ -2.26
MMP3P08254 SNORD114-24-201ENST00000365029 72 ntBASIC0.94□□□□□ -2.26
MMP3P08254 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
MMP3P08254 SNORD116-14-201ENST00000383894 92 ntBASIC0.94□□□□□ -2.26
MMP3P08254 SNORD116-17-201ENST00000383929 92 ntBASIC0.94□□□□□ -2.26
MMP3P08254 SNORD116-15-201ENST00000384445 92 ntBASIC0.94□□□□□ -2.26
MMP3P08254 SNORD116-19-201ENST00000384729 92 ntBASIC0.94□□□□□ -2.26
MMP3P08254 MIR200A-201ENST00000384875 90 ntBASIC0.94□□□□□ -2.26
MMP3P08254 MIR1827-201ENST00000408549 66 ntBASIC0.94□□□□□ -2.26
MMP3P08254 SNORD93-201ENST00000408813 74 ntBASIC0.94□□□□□ -2.26
MMP3P08254 MIR18B-201ENST00000454574 71 ntBASIC0.94□□□□□ -2.26
MMP3P08254 PDCD5P2-201ENST00000507570 312 ntBASIC0.94□□□□□ -2.26
MMP3P08254 UBL5P1-201ENST00000507979 193 ntBASIC0.94□□□□□ -2.26
MMP3P08254 SNORD33.1-201ENST00000516213 88 ntBASIC0.94□□□□□ -2.26
MMP3P08254 RNU6-977P-201ENST00000516411 103 ntBASIC0.94□□□□□ -2.26
MMP3P08254 RNU6-659P-201ENST00000516454 104 ntBASIC0.94□□□□□ -2.26
MMP3P08254 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
MMP3P08254 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
MMP3P08254 Y_RNA.213-201ENST00000364178 111 ntBASIC0.93□□□□□ -2.26
MMP3P08254 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
MMP3P08254 RNU6-81P-201ENST00000365608 104 ntBASIC0.93□□□□□ -2.26
MMP3P08254 RNU6-949P-201ENST00000384040 107 ntBASIC0.93□□□□□ -2.26
MMP3P08254 RNU6-616P-201ENST00000384353 107 ntBASIC0.93□□□□□ -2.26
MMP3P08254 MIR520F-201ENST00000384824 87 ntBASIC0.93□□□□□ -2.26
MMP3P08254 RNA5SP136-201ENST00000410906 107 ntBASIC0.93□□□□□ -2.26
MMP3P08254 AC096949.1-201ENST00000412047 152 ntBASIC0.93□□□□□ -2.26
MMP3P08254 AC004941.2-201ENST00000427009 228 ntBASIC0.93□□□□□ -2.26
MMP3P08254 FABP5P4-201ENST00000437203 171 ntBASIC0.93□□□□□ -2.26
MMP3P08254 RNU6-403P-201ENST00000363163 104 ntBASIC0.92□□□□□ -2.26
MMP3P08254 Y_RNA.127-201ENST00000363386 109 ntBASIC0.92□□□□□ -2.26
MMP3P08254 Y_RNA.198-201ENST00000364013 98 ntBASIC0.92□□□□□ -2.26
MMP3P08254 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
MMP3P08254 COX6CP6-201ENST00000490840 228 ntBASIC0.92□□□□□ -2.26
MMP3P08254 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
MMP3P08254 RNU7-137P-201ENST00000516788 62 ntBASIC0.92□□□□□ -2.26
MMP3P08254 Y_RNA.773-201ENST00000607168 90 ntBASIC0.92□□□□□ -2.26
MMP3P08254 SNORA72.6-201ENST00000384520 129 ntBASIC0.91□□□□□ -2.26
MMP3P08254 RNU6-1307P-201ENST00000391012 103 ntBASIC0.91□□□□□ -2.26
MMP3P08254 SNORD77B-201ENST00000391112 67 ntBASIC0.91□□□□□ -2.26
MMP3P08254 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.91□□□□□ -2.26
MMP3P08254 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
MMP3P08254 MIR3163-201ENST00000581592 73 ntBASIC0.91□□□□□ -2.26
MMP3P08254 MIR4804-201ENST00000581683 73 ntBASIC0.91□□□□□ -2.26
MMP3P08254 AC008608.1-201ENST00000603910 127 ntBASIC0.91□□□□□ -2.26
MMP3P08254 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.91□□□□□ -2.26
MMP3P08254 AC087741.2-201ENST00000619415 172 ntBASIC0.91□□□□□ -2.26
MMP3P08254 MIR3914-2-201ENST00000637339 95 ntBASIC0.91□□□□□ -2.26
MMP3P08254 Y_RNA.299-201ENST00000364973 94 ntBASIC0.9□□□□□ -2.27
MMP3P08254 SNORA19-201ENST00000384737 128 ntBASIC0.9□□□□□ -2.27
MMP3P08254 MIR605-201ENST00000385078 83 ntBASIC0.9□□□□□ -2.27
MMP3P08254 MIR520H-201ENST00000385126 88 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms