Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
ITGB1P05556 RNU6-1313P-201ENST00000362622 102 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 SNORD115-35-201ENST00000365122 82 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 RNU6-1237P-201ENST00000384777 107 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 MIR206-201ENST00000384872 86 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.67□□□□□ -2.14
ITGB1P05556 UBL5P1-201ENST00000507979 193 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 Y_RNA.659-201ENST00000515994 113 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 RNU6-1018P-201ENST00000516577 106 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 RNU7-35P-201ENST00000517174 62 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 CYP3A52P-201ENST00000563326 91 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 AL357312.1-201ENST00000603879 298 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 GHRLOS.1-201ENST00000610995 70 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 U7.3-201ENST00000616123 62 ntBASIC1.67□□□□□ -2.14
ITGB1P05556 Y_RNA.247-201ENST00000364500 92 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 Y_RNA.377-201ENST00000365644 108 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 Y_RNA.467-201ENST00000384297 102 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 MIR517C-201ENST00000385103 95 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 RNU6-1086P-201ENST00000410930 100 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 RNU7-79P-201ENST00000516082 62 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 RNU7-2P-201ENST00000516096 62 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 SNORD67.1-201ENST00000516618 108 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 AC026421.1-201ENST00000519101 163 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 MIR4421-201ENST00000578133 69 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 MIR6504-201ENST00000613520 61 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 MIR8063-201ENST00000621930 81 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 ZNF209P-201ENST00000593450 2304 ntBASIC1.66□□□□□ -2.14
ITGB1P05556 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
ITGB1P05556 RNA5SP48-201ENST00000363969 126 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 SNORD45B-201ENST00000364617 72 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 SNORD1A-201ENST00000364968 72 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 RNU6-1134P-201ENST00000365156 101 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 Y_RNA.354-201ENST00000365448 111 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 AC096949.1-201ENST00000412047 152 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 HSPE1P24-201ENST00000450782 238 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 MIR3192-201ENST00000584920 77 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 AL096861.1-201ENST00000610899 123 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 MIR376B-201ENST00000614515 100 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 AC105081.1-201ENST00000617727 106 ntBASIC1.65□□□□□ -2.15
ITGB1P05556 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ITGB1P05556 Y_RNA.95-201ENST00000363079 95 ntBASIC1.64□□□□□ -2.15
ITGB1P05556 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
ITGB1P05556 MIR34C-201ENST00000384831 77 ntBASIC1.64□□□□□ -2.15
ITGB1P05556 MRPL35P3-201ENST00000421557 364 ntBASIC1.64□□□□□ -2.15
ITGB1P05556 RNU1-92P-201ENST00000517017 135 ntBASIC1.64□□□□□ -2.15
ITGB1P05556 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.64□□□□□ -2.15
ITGB1P05556 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ITGB1P05556 SNORD33-201ENST00000362761 85 ntBASIC1.63□□□□□ -2.15
ITGB1P05556 SNORD38B-201ENST00000384690 67 ntBASIC1.63□□□□□ -2.15
ITGB1P05556 AC027119.1-201ENST00000440877 241 ntBASIC1.63□□□□□ -2.15
ITGB1P05556 AC109327.2-201ENST00000448339 378 ntBASIC1.63□□□□□ -2.15
ITGB1P05556 snoU13.18-201ENST00000459483 104 ntBASIC1.63□□□□□ -2.15
ITGB1P05556 SNORA31.24-201ENST00000517232 57 ntBASIC1.63□□□□□ -2.15
ITGB1P05556 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.63□□□□□ -2.15
ITGB1P05556 AL157834.3-201ENST00000615543 103 ntBASIC1.63□□□□□ -2.15
ITGB1P05556 SNORD38B-202ENST00000625943 69 ntBASIC1.63□□□□□ -2.15
ITGB1P05556 MIR494-201ENST00000349529 81 ntBASIC1.62□□□□□ -2.15
ITGB1P05556 SNORA25.3-201ENST00000363205 127 ntBASIC1.62□□□□□ -2.15
ITGB1P05556 Y_RNA.448-201ENST00000384185 108 ntBASIC1.62□□□□□ -2.15
ITGB1P05556 RNU6-1321P-201ENST00000390905 107 ntBASIC1.62□□□□□ -2.15
ITGB1P05556 snoU13.25-201ENST00000458945 104 ntBASIC1.62□□□□□ -2.15
ITGB1P05556 AC079140.2-201ENST00000506193 142 ntBASIC1.62□□□□□ -2.15
ITGB1P05556 RNU7-137P-201ENST00000516788 62 ntBASIC1.62□□□□□ -2.15
ITGB1P05556 RNU6-1006P-201ENST00000516998 103 ntBASIC1.62□□□□□ -2.15
ITGB1P05556 SNORA4-201ENST00000584302 138 ntBASIC1.62□□□□□ -2.15
ITGB1P05556 Y_RNA.190-201ENST00000363964 101 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 RNA5SP173-201ENST00000364857 136 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 MIR1302-7-201ENST00000408841 72 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 Y_RNA.593-201ENST00000410292 98 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 AC244023.1-201ENST00000426884 112 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 RNU1-123P-201ENST00000458950 160 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 RN7SKP12-201ENST00000516275 143 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 AC019176.1-201ENST00000518519 225 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 AC242498.1-201ENST00000604134 111 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 AC096720.1-201ENST00000604441 183 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 PRELID3BP2-201ENST00000605362 201 ntBASIC1.61□□□□□ -2.15
ITGB1P05556 AL161722.3-201ENST00000605789 2983 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 Y_RNA.17-201ENST00000362433 111 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 RNY1P13-201ENST00000365030 105 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 MIR450A2-201ENST00000385022 100 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 RNU6-592P-201ENST00000411333 103 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 AL354695.1-201ENST00000427935 228 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 RPS29P28-201ENST00000446439 141 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 RPL30P7-201ENST00000479312 323 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 RNU6-947P-201ENST00000516264 106 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 SEPT14P17-201ENST00000617978 177 ntBASIC1.6□□□□□ -2.15
ITGB1P05556 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.6□□□□□ -2.15
ITGB1P05556 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
ITGB1P05556 RNU6-865P-201ENST00000364772 107 ntBASIC1.59□□□□□ -2.15
ITGB1P05556 RNU6-573P-201ENST00000383938 106 ntBASIC1.59□□□□□ -2.15
ITGB1P05556 Y_RNA.705-201ENST00000516862 110 ntBASIC1.59□□□□□ -2.15
ITGB1P05556 RNA5SP102-201ENST00000516865 106 ntBASIC1.59□□□□□ -2.15
ITGB1P05556 AP003716.2-201ENST00000528260 108 ntBASIC1.59□□□□□ -2.15
ITGB1P05556 AC141846.1-201ENST00000568348 142 ntBASIC1.59□□□□□ -2.15
ITGB1P05556 RNU6-86P-201ENST00000606534 107 ntBASIC1.59□□□□□ -2.15
ITGB1P05556 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.59□□□□□ -2.15
ITGB1P05556 SNORD114-10-201ENST00000363409 72 ntBASIC1.58□□□□□ -2.16
ITGB1P05556 Y_RNA.191-201ENST00000363972 113 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms