Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AL160413.1-201ENST00000622780 310 ntBASIC-0.4□□□□□ -2.47
MT-ND3P03897 AL162376.1-201ENST00000624117 175 ntBASIC-0.4□□□□□ -2.47
MT-ND3P03897 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.4□□□□□ -2.47
MT-ND3P03897 AC134503.1-201ENST00000633048 54 ntBASIC-0.4□□□□□ -2.47
MT-ND3P03897 MIR6086-201ENST00000638065 55 ntBASIC-0.4□□□□□ -2.47
MT-ND3P03897 RNU4-17P-201ENST00000365598 141 ntBASIC-0.41□□□□□ -2.48
MT-ND3P03897 SNORA22B-201ENST00000383876 138 ntBASIC-0.41□□□□□ -2.48
MT-ND3P03897 RNY3P14-201ENST00000384309 102 ntBASIC-0.41□□□□□ -2.48
MT-ND3P03897 Z95118.1-201ENST00000421372 247 ntBASIC-0.41□□□□□ -2.48
MT-ND3P03897 AC244505.6-201ENST00000452829 130 ntBASIC-0.41□□□□□ -2.48
MT-ND3P03897 SNORD4A-201ENST00000459174 72 ntBASIC-0.41□□□□□ -2.48
MT-ND3P03897 RNU6-180P-201ENST00000516697 61 ntBASIC-0.41□□□□□ -2.48
MT-ND3P03897 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.41□□□□□ -2.48
MT-ND3P03897 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.42□□□□□ -2.48
MT-ND3P03897 MTND5P22-201ENST00000458380 195 ntBASIC-0.42□□□□□ -2.48
MT-ND3P03897 SCARNA15-202ENST00000516881 127 ntBASIC-0.42□□□□□ -2.48
MT-ND3P03897 MIR378D2-201ENST00000580636 98 ntBASIC-0.42□□□□□ -2.48
MT-ND3P03897 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.42□□□□□ -2.48
MT-ND3P03897 U2.14-201ENST00000615943 113 ntBASIC-0.42□□□□□ -2.48
MT-ND3P03897 RNY1P2-201ENST00000364820 117 ntBASIC-0.43□□□□□ -2.48
MT-ND3P03897 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.43□□□□□ -2.48
MT-ND3P03897 SNORA32-201ENST00000384072 121 ntBASIC-0.43□□□□□ -2.48
MT-ND3P03897 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.43□□□□□ -2.48
MT-ND3P03897 MIR624-201ENST00000385217 97 ntBASIC-0.43□□□□□ -2.48
MT-ND3P03897 RNU6-651P-201ENST00000411040 105 ntBASIC-0.43□□□□□ -2.48
MT-ND3P03897 HMGN2P22-201ENST00000427588 175 ntBASIC-0.43□□□□□ -2.48
MT-ND3P03897 RNA5SP476-201ENST00000516613 103 ntBASIC-0.43□□□□□ -2.48
MT-ND3P03897 RNU2-60P-201ENST00000517290 128 ntBASIC-0.43□□□□□ -2.48
MT-ND3P03897 SNORD114-28-201ENST00000363610 72 ntBASIC-0.44□□□□□ -2.48
MT-ND3P03897 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.44□□□□□ -2.48
MT-ND3P03897 AC138749.4-201ENST00000563970 127 ntBASIC-0.44□□□□□ -2.48
MT-ND3P03897 MIR4282-201ENST00000583613 67 ntBASIC-0.44□□□□□ -2.48
MT-ND3P03897 AC006504.6-201ENST00000590142 199 ntBASIC-0.44□□□□□ -2.48
MT-ND3P03897 RNU7-10P-201ENST00000607194 63 ntBASIC-0.44□□□□□ -2.48
MT-ND3P03897 AC098479.1-201ENST00000609225 154 ntBASIC-0.44□□□□□ -2.48
MT-ND3P03897 uc_338.28-201ENST00000612082 187 ntBASIC-0.44□□□□□ -2.48
MT-ND3P03897 AC105081.1-201ENST00000617727 106 ntBASIC-0.44□□□□□ -2.48
MT-ND3P03897 AC073869.9-201ENST00000641610 120 ntBASIC-0.44□□□□□ -2.48
MT-ND3P03897 SNORA18.1-201ENST00000363418 128 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 RNY1P6-201ENST00000384193 109 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 AL022718.1-201ENST00000412004 84 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 AL121914.1-201ENST00000450188 156 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 RNU7-113P-201ENST00000459273 62 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 NAMPTP3-201ENST00000569273 224 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 MIR548H5-201ENST00000580314 60 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 MIR4493-201ENST00000584016 73 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 AL359881.1-201ENST00000602916 267 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.45□□□□□ -2.48
MT-ND3P03897 RNU6-978P-201ENST00000364371 103 ntBASIC-0.46□□□□□ -2.48
MT-ND3P03897 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.46□□□□□ -2.48
MT-ND3P03897 RNA5SP484-201ENST00000458857 111 ntBASIC-0.46□□□□□ -2.48
MT-ND3P03897 MIR4680-201ENST00000580906 66 ntBASIC-0.46□□□□□ -2.48
MT-ND3P03897 MIR335-201ENST00000362173 94 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 MIR548P-201ENST00000408336 84 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 RNA5SP144-201ENST00000410846 116 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 BX276092.1-201ENST00000427368 251 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 RNU6-758P-201ENST00000516292 89 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 SNORD67.1-201ENST00000516618 108 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
MT-ND3P03897 AL442663.2-201ENST00000554385 511 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 MIR4744-201ENST00000581563 82 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 AL356055.1-201ENST00000602528 446 ntBASIC-0.47□□□□□ -2.48
MT-ND3P03897 SNORD115-2-201ENST00000362842 82 ntBASIC-0.48□□□□□ -2.49
MT-ND3P03897 RNA5SP403-201ENST00000363598 108 ntBASIC-0.48□□□□□ -2.49
MT-ND3P03897 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.48□□□□□ -2.49
MT-ND3P03897 SNORD115-20-201ENST00000365099 82 ntBASIC-0.48□□□□□ -2.49
MT-ND3P03897 RNU6-46P-201ENST00000383860 107 ntBASIC-0.48□□□□□ -2.49
MT-ND3P03897 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.48□□□□□ -2.49
MT-ND3P03897 RNA5SP33-201ENST00000516687 98 ntBASIC-0.48□□□□□ -2.49
MT-ND3P03897 U6.104-201ENST00000637979 90 ntBASIC-0.48□□□□□ -2.49
MT-ND3P03897 SNORD49B-201ENST00000365172 72 ntBASIC-0.49□□□□□ -2.49
MT-ND3P03897 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.49□□□□□ -2.49
MT-ND3P03897 SNORA75.1-201ENST00000391130 148 ntBASIC-0.49□□□□□ -2.49
MT-ND3P03897 SNORD110-201ENST00000408189 75 ntBASIC-0.49□□□□□ -2.49
MT-ND3P03897 AC006210.1-201ENST00000424882 111 ntBASIC-0.49□□□□□ -2.49
MT-ND3P03897 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.49□□□□□ -2.49
MT-ND3P03897 SNORD114-10-201ENST00000363409 72 ntBASIC-0.5□□□□□ -2.49
MT-ND3P03897 RNU6-865P-201ENST00000364772 107 ntBASIC-0.5□□□□□ -2.49
MT-ND3P03897 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.5□□□□□ -2.49
MT-ND3P03897 RNU6-713P-201ENST00000384761 107 ntBASIC-0.5□□□□□ -2.49
MT-ND3P03897 MIR604-201ENST00000384880 94 ntBASIC-0.5□□□□□ -2.49
MT-ND3P03897 AC244250.2-201ENST00000418731 148 ntBASIC-0.5□□□□□ -2.49
MT-ND3P03897 RNU6-320P-201ENST00000516511 106 ntBASIC-0.5□□□□□ -2.49
MT-ND3P03897 RNU7-137P-201ENST00000516788 62 ntBASIC-0.5□□□□□ -2.49
MT-ND3P03897 AC084368.1-201ENST00000620935 65 ntBASIC-0.5□□□□□ -2.49
MT-ND3P03897 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.5□□□□□ -2.49
MT-ND3P03897 MIR101-1-201ENST00000362265 75 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 RNU6-429P-201ENST00000384582 108 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 MIR516B1-201ENST00000385211 90 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 RNA5SP25-201ENST00000410815 110 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 HAR1A.1-201ENST00000459583 118 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 MTND4P29-201ENST00000503122 1372 ntBASIC-0.51□□□□□ -2.49
MT-ND3P03897 TRAJ51-201ENST00000504127 63 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 228.5 ms