Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 Y_RNA.298-201ENST00000364960 107 ntBASIC0.53□□□□□ -2.32
MT-ND1P03886 MIR520E-201ENST00000384867 87 ntBASIC0.53□□□□□ -2.32
MT-ND1P03886 Y_RNA.617-201ENST00000410920 90 ntBASIC0.53□□□□□ -2.32
MT-ND1P03886 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.53□□□□□ -2.32
MT-ND1P03886 RNU6-255P-201ENST00000516957 105 ntBASIC0.53□□□□□ -2.32
MT-ND1P03886 AC022523.2-201ENST00000561045 150 ntBASIC0.53□□□□□ -2.32
MT-ND1P03886 CYP3A137P-201ENST00000562436 69 ntBASIC0.53□□□□□ -2.32
MT-ND1P03886 AL359881.1-201ENST00000602916 267 ntBASIC0.53□□□□□ -2.32
MT-ND1P03886 MIR18A-201ENST00000362310 71 ntBASIC0.52□□□□□ -2.33
MT-ND1P03886 RNU6-403P-201ENST00000363163 104 ntBASIC0.52□□□□□ -2.33
MT-ND1P03886 Y_RNA.420-201ENST00000384043 110 ntBASIC0.52□□□□□ -2.33
MT-ND1P03886 MIR513C-201ENST00000401352 84 ntBASIC0.52□□□□□ -2.33
MT-ND1P03886 SNORD100-201ENST00000408573 76 ntBASIC0.52□□□□□ -2.33
MT-ND1P03886 AC002350.1-201ENST00000490759 375 ntBASIC0.52□□□□□ -2.33
MT-ND1P03886 AL137067.1-201ENST00000615933 120 ntBASIC0.52□□□□□ -2.33
MT-ND1P03886 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
MT-ND1P03886 SNORA36.2-201ENST00000384004 127 ntBASIC0.51□□□□□ -2.33
MT-ND1P03886 Y_RNA.464-201ENST00000384282 110 ntBASIC0.51□□□□□ -2.33
MT-ND1P03886 RPL39P25-201ENST00000449384 154 ntBASIC0.51□□□□□ -2.33
MT-ND1P03886 RNU7-200P-201ENST00000516105 62 ntBASIC0.51□□□□□ -2.33
MT-ND1P03886 SNORD67.1-201ENST00000516618 108 ntBASIC0.51□□□□□ -2.33
MT-ND1P03886 SNORA25.16-201ENST00000516741 121 ntBASIC0.51□□□□□ -2.33
MT-ND1P03886 RNU6-1212P-201ENST00000517023 104 ntBASIC0.51□□□□□ -2.33
MT-ND1P03886 MIR6082-201ENST00000613604 109 ntBASIC0.51□□□□□ -2.33
MT-ND1P03886 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.51□□□□□ -2.33
MT-ND1P03886 AP001340.1-201ENST00000624405 217 ntBASIC0.51□□□□□ -2.33
MT-ND1P03886 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
MT-ND1P03886 Y_RNA.114-201ENST00000363265 113 ntBASIC0.5□□□□□ -2.33
MT-ND1P03886 MT-TI-201ENST00000387365 69 ntBASIC0.5□□□□□ -2.33
MT-ND1P03886 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
MT-ND1P03886 MIR1276-201ENST00000408707 83 ntBASIC0.5□□□□□ -2.33
MT-ND1P03886 RNU6-426P-201ENST00000516464 97 ntBASIC0.5□□□□□ -2.33
MT-ND1P03886 Y_RNA.692-201ENST00000516627 105 ntBASIC0.5□□□□□ -2.33
MT-ND1P03886 RNY4P20-201ENST00000516678 93 ntBASIC0.5□□□□□ -2.33
MT-ND1P03886 RNU7-137P-201ENST00000516788 62 ntBASIC0.5□□□□□ -2.33
MT-ND1P03886 RNU6-448P-201ENST00000517052 107 ntBASIC0.5□□□□□ -2.33
MT-ND1P03886 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.5□□□□□ -2.33
MT-ND1P03886 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
MT-ND1P03886 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
MT-ND1P03886 Y_RNA.280-201ENST00000364765 112 ntBASIC0.49□□□□□ -2.33
MT-ND1P03886 Y_RNA.506-201ENST00000384494 102 ntBASIC0.49□□□□□ -2.33
MT-ND1P03886 MT-TR-201ENST00000387439 65 ntBASIC0.49□□□□□ -2.33
MT-ND1P03886 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
MT-ND1P03886 MIR548I1-201ENST00000408810 149 ntBASIC0.49□□□□□ -2.33
MT-ND1P03886 RNU6-346P-201ENST00000516288 111 ntBASIC0.49□□□□□ -2.33
MT-ND1P03886 AP001328.1-201ENST00000528550 176 ntBASIC0.49□□□□□ -2.33
MT-ND1P03886 AC105081.1-201ENST00000617727 106 ntBASIC0.49□□□□□ -2.33
MT-ND1P03886 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
MT-ND1P03886 SNORD114-22-201ENST00000365423 72 ntBASIC0.48□□□□□ -2.33
MT-ND1P03886 RNU6-945P-201ENST00000383947 107 ntBASIC0.48□□□□□ -2.33
MT-ND1P03886 SNORA72.6-201ENST00000384520 129 ntBASIC0.48□□□□□ -2.33
MT-ND1P03886 RNU4-69P-201ENST00000410677 143 ntBASIC0.48□□□□□ -2.33
MT-ND1P03886 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
MT-ND1P03886 MTND5P34-201ENST00000568888 325 ntBASIC0.48□□□□□ -2.33
MT-ND1P03886 MIR3668-201ENST00000582138 75 ntBASIC0.48□□□□□ -2.33
MT-ND1P03886 RNA5SP432-201ENST00000362480 116 ntBASIC0.47□□□□□ -2.33
MT-ND1P03886 Y_RNA.488-201ENST00000384403 102 ntBASIC0.47□□□□□ -2.33
MT-ND1P03886 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
MT-ND1P03886 RNU6-1307P-201ENST00000391012 103 ntBASIC0.47□□□□□ -2.33
MT-ND1P03886 RN7SKP19-201ENST00000516016 252 ntBASIC0.47□□□□□ -2.33
MT-ND1P03886 RNU6-531P-201ENST00000516694 104 ntBASIC0.47□□□□□ -2.33
MT-ND1P03886 AC138749.4-201ENST00000563970 127 ntBASIC0.47□□□□□ -2.33
MT-ND1P03886 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
MT-ND1P03886 RNA5SP133-201ENST00000363368 119 ntBASIC0.46□□□□□ -2.34
MT-ND1P03886 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
MT-ND1P03886 RNU6-679P-201ENST00000391003 106 ntBASIC0.46□□□□□ -2.34
MT-ND1P03886 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.46□□□□□ -2.34
MT-ND1P03886 MIR3678-201ENST00000578455 94 ntBASIC0.46□□□□□ -2.34
MT-ND1P03886 MIR4714-201ENST00000580728 77 ntBASIC0.46□□□□□ -2.34
MT-ND1P03886 MIR6504-201ENST00000613520 61 ntBASIC0.46□□□□□ -2.34
MT-ND1P03886 uc_338.16-201ENST00000621804 95 ntBASIC0.46□□□□□ -2.34
MT-ND1P03886 U6.109-201ENST00000636749 87 ntBASIC0.46□□□□□ -2.34
MT-ND1P03886 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
MT-ND1P03886 Y_RNA.32-201ENST00000362589 110 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 SNORD114-10-201ENST00000363409 72 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 RNA5SP117-201ENST00000365294 118 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 RNU6-291P-201ENST00000384720 107 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 MIR644A-201ENST00000385262 94 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 RNU6-1321P-201ENST00000390905 107 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 MTND4LP9-201ENST00000427694 174 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 AL158147.1-201ENST00000443970 75 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 SNORA31.14-201ENST00000516728 116 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 RNU6-765P-201ENST00000516916 99 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 AP003327.1-201ENST00000529684 127 ntBASIC0.45□□□□□ -2.34
MT-ND1P03886 Y_RNA.299-201ENST00000364973 94 ntBASIC0.44□□□□□ -2.34
MT-ND1P03886 RNU6-209P-201ENST00000384118 107 ntBASIC0.44□□□□□ -2.34
MT-ND1P03886 Y_RNA.536-201ENST00000384621 113 ntBASIC0.44□□□□□ -2.34
MT-ND1P03886 MIR206-201ENST00000384872 86 ntBASIC0.44□□□□□ -2.34
MT-ND1P03886 RPS29P1-201ENST00000465274 159 ntBASIC0.44□□□□□ -2.34
MT-ND1P03886 RNU6-781P-201ENST00000516377 101 ntBASIC0.44□□□□□ -2.34
MT-ND1P03886 U7.2-201ENST00000607576 63 ntBASIC0.44□□□□□ -2.34
MT-ND1P03886 AC087741.2-201ENST00000619415 172 ntBASIC0.44□□□□□ -2.34
MT-ND1P03886 Y_RNA.119-201ENST00000363301 96 ntBASIC0.43□□□□□ -2.34
MT-ND1P03886 RNA5SP245-201ENST00000364239 121 ntBASIC0.43□□□□□ -2.34
MT-ND1P03886 RNU6-616P-201ENST00000384353 107 ntBASIC0.43□□□□□ -2.34
MT-ND1P03886 Y_RNA.568-201ENST00000384742 113 ntBASIC0.43□□□□□ -2.34
MT-ND1P03886 RNU6-257P-201ENST00000410238 98 ntBASIC0.43□□□□□ -2.34
MT-ND1P03886 RNU6-735P-201ENST00000410612 107 ntBASIC0.43□□□□□ -2.34
MT-ND1P03886 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
MT-ND1P03886 RNA5SP94-201ENST00000516917 108 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms